Serinus canaria (common canary): 103824680
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Entry
103824680 CDS
T05755
Name
(RefSeq) transitional endoplasmic reticulum ATPase-like
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
scan
Serinus canaria (common canary)
Pathway
scan04137
Mitophagy - animal
scan04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
scan00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
103824680
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
103824680
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
scan03019
]
103824680
03009 Ribosome biogenesis [BR:
scan03009
]
103824680
04131 Membrane trafficking [BR:
scan04131
]
103824680
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
scan04147
]
103824680
Messenger RNA biogenesis [BR:
scan03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
103824680
Ribosome biogenesis [BR:
scan03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
103824680
Membrane trafficking [BR:
scan04131
]
SNARE
SNARE associated proteins
Others
103824680
Autophagy
Aggrephagy
Other aggrephagy associated proteins
103824680
Exosome [BR:
scan04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
103824680
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
CDC48_2
AAA_16
Vps4_C
AAA_2
AAA_5
RuvB_N
AAA_33
AAA_22
TIP49
AAA_14
nSTAND3
AAA_28
AAA_18
AAA_17
Mg_chelatase
IstB_IS21
RNA_helicase
Parvo_NS1
ResIII
AAA_24
KAP_NTPase
SLFN-g3_helicase
DUF3944
AAA_7
Zot
Motif
Other DBs
NCBI-GeneID:
103824680
NCBI-ProteinID:
XP_030091071
LinkDB
All DBs
Position
Unknown
AA seq
852 aa
AA seq
DB search
MASGSDSKGDDLSTAILKQKNRPNRLIVDEAINEDNSVVSLSQAKMDELQLFRGDTVLLK
GKKRREAVCIVLSDDTCSDEKIRMNRVVRNNLRVRLGDVISIQPCPDVKYGKRIHVLPID
DTVEGITGNLFEVYLKPYFLEAYRPIRKGDIFLVRGGMRAVEFKVVETDPSPYCIVAPDT
VIHCEGEPIKREDEEESLNEVGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRG
ILLYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAI
IFIDELDAIAPKREKTHGEVERRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRF
GRFDREVDIGIPDATGRLEILQIHTKNMKLADDVDLEQVANETHGHVGADLAALCSEAAL
QAIRKKMDLIDLEDETIDAEVMNSLAVTMDDFRWALSQSNPSALRETVVEVPQVTWEDIG
GLEDVKRELQELVQSTLPEFAYEDVVRDSAESLAEVKVDNIHCSPLIHPCSCFIVEGNQD
LFPWDSSKKIPEEAKVSSPGVHGYNLTCCPASFSHDTELVNLMVTTAKAAPNLYISKKAF
PVLIVPICFLQARQAAPCVLFFDELDSIAKARGGNIGDGGGAADRVINQILTEMDGMSTK
KNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSRVAILKANLRKSPVAKDVDLDF
LAKMTNGFSGADLTEICQRACKLAIRESIESEIRRERERQTNPSAMEVEEDDPVPEIRRD
HFEEAMRFARRSVSDNDIRKYEMFAQTLQQSRGFGSFRFPSGNQGSTGPSQGTGGGSGGN
VYSEDNDDDLYG
NT seq
2559 nt
NT seq
+upstream
nt +downstream
nt
atggcctcaggatccgactctaaaggtgatgacttatcaactgctattctgaagcagaag
aacaggcctaatcggttaattgttgacgaagccatcaatgaagacaacagtgttgtgtca
ctttcccaggcaaaaatggatgaactgcagctgtttagaggagacactgtcctgctaaaa
ggaaagaagaggagagaagcagtctgcattgttctgtcagatgatacctgctcagatgag
aagattcgcatgaatagggtcgttcgaaacaacttgagagtgcgcctgggtgacgtcatc
agcatccagccttgcccagatgtgaaatatggcaaacgtatccatgtgttaccaattgat
gacacagtagaagggatcacagggaatctgtttgaggtctatctcaagccatatttcctg
gaagcttacagacccatcaggaaaggtgacatcttcttggtacgtggagggatgcgtgca
gtggagttcaaagtggtggagacagatccaagcccatactgcatagtggctccagacaca
gtgatccattgtgagggagagcccatcaaaagagaggatgaagaggagtcgctgaatgaa
gtgggctatgatgacattggtggctgccggaagcagctggctcaaatcaaagaaatggtg
gaacttcccctccgacaccctgctctcttcaaggccataggggtcaagcctccacgtggg
atcctgctgtatggtcctcctggcactggtaaaacactgattgcccgagcggtggccaat
gaaacaggggctttcttcttcctgatcaatggtcctgagatcatgagcaagctggctggt
gagtctgagagcaacctgaggaaagcctttgaagaagcagagaagaatgctcctgctatc
atcttcattgatgaactggatgccattgctcctaaaagagagaagacacacggagaggtg
gaacgtcgcatcgtgtctcagctgctgactcttatggatggactgaaacagagagcacat
gtgatcgttatggcagccaccaacagacctaacagcattgacccagctctcaggcgattt
ggtcgttttgacagagaggtagatattggtatcccagatgccactgggcgcttggaaatc
ctgcagattcacacaaaaaatatgaaactagctgatgatgtggatctggaacaggtggca
aacgagacccatggccatgttggcgctgacttggctgctctttgctcagaagctgctctt
caggctatcagaaagaagatggatctcatagacctagaagatgaaaccatcgatgctgaa
gtgatgaactcactggctgtaaccatggatgacttcaggtgggctctgagccagagcaac
ccttctgctcttagggagactgtggtggaggtgccacaagttacctgggaagatattggt
ggtctagaagatgtaaagagagaactccaggaacttgtacagtccacacttcctgagttt
gcctatgaggatgttgtgagagacagtgctgaaagccttgctgaagtcaaggtagacaat
atccactgctctcccctcatccatccatgtagttgtttcatcgtagaaggcaatcaggac
ttatttccatgggattcttccaagaagatccctgaagaggctaaagttagctctcctgga
gtccatggttacaatcttacttgctgccctgcttctttctcgcatgatactgaacttgtc
aatctcatggtcactacagccaaggctgcccccaacctttacatctccaaaaaggccttc
cctgttttgattgttcccatttgctttttgcaggctcgccaagcagccccatgtgtgctc
ttctttgatgagctggactccatcgccaaggcccgaggtgggaatattggtgatggcggt
ggtgctgcagatcgtgtcatcaaccagattctgaccgagatggacggcatgtccaccaag
aaaaatgtcttcatcattggtgccaccaacaggccagacatcattgacccagccatcctg
cgccctggccgcctggatcagctcatctacatccccctgcctgatgagaagtcccgggtt
gcaattcttaaagccaatttgaggaaatcaccagttgccaaggacgttgacctggatttc
ctagctaagatgaccaatggcttttcgggggctgacctgacagaaatttgccagcgtgcc
tgcaaactggccatccgcgaatccatcgagagtgagatcaggcgagaacgtgagaggcag
accaacccttctgccatggaggtggaggaggacgacccggtccctgagatacgcagggat
cattttgaggaggccatgcgctttgctcgccgctctgtcagtgacaatgacatcaggaaa
tatgagatgtttgcacagaccctacagcagagccgtggctttggcagcttcaggttccca
tcaggcaaccagggcagtaccggtccgagccaaggcacaggaggtggcagcgggggcaac
gtgtacagcgaagacaatgacgacgatctctatggttaa
DBGET
integrated database retrieval system
