Serinus canaria (common canary): 103825248
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Entry
103825248 CDS
T05755
Name
(RefSeq) LOW QUALITY PROTEIN: splicing factor 1-like
KO
K13095
splicing factor 1
Organism
scan
Serinus canaria (common canary)
Pathway
scan03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
scan00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
103825248
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
scan03041
]
103825248
Spliceosome [BR:
scan03041
]
Complex A
Other components
Complex A specific factors
103825248
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SF1-HH
KH-I_KHDC4-BBP
KH_1
zf-CCHC
KH_12
zf-CCHC_3
Motif
Other DBs
NCBI-GeneID:
103825248
NCBI-ProteinID:
XP_030093511
LinkDB
All DBs
Position
Unknown
AA seq
723 aa
AA seq
DB search
MGVEEFGVEFLEEFEVEFLEEFGAEFVEEGLGVSSPAQPPPPPPPPSQAPGGPAAPQPPG
GPAAPQPPPAAPYGQFRFPSPPPGHDPPAAPAGAPPAAPAAPPQPAGAPQQPLPEEGAGG
AGTGPVYAVERRESAHKPEAGLWALIPPIWGSRPPLPCLVKHRRRDTCPHPRTSRRTLRT
GPQNTPRPPPKHNPSPLREAQRWRICPNRGVFPPDFPRKRKRSRWNQDSLEQKTVIPGMP
TVIPPGLTREQERAYIVQLQIEDLTRKLRTGDLGIPPNPEDSLGVLLWNPPPPVWVFPLS
PTRGSLGPPPRPIYNSEGKRLNTREFRTRKKLEEESTTSSPDGGPDPDFKPPADYKPPAT
RVSDKVMIPQDEYPEINXXXXXXXXYPEINFVGLLIGPRGNTLKNIEKECNAKIMIRGKG
SVKEGKVGRKDGQMLPGEDEPLHALVTANTMENVKKAVEQIRNILKQGIETPEDQNDLRK
MQLRELARLNGTLREDDNRILRPWQSTETRSITNTTVCTKCGGAGHIASDCKFARPGDPX
AQDKARMDKEYLSLMSELGEARCPXAPTPPTTTAPCPAAPPQNPPDPLFFPPQSRPPWMS
SAPSENXPYHGLHGGRGARGPHSFPHPMAGMGGGHGGHPLQHTPNGPPPWMQXPPSPMGG
GPHPPGHPGPHPHGSVPGKCAGGLWGLSPAPGKGMMPPPLGMLPPAPPRPGGQRPPPPAP
SLP
NT seq
2170 nt
NT seq
+upstream
nt +downstream
nt
atgggggtggaagaatttggggtggaatttttggaggagtttgaagtggaatttttggag
gaatttggggcggaatttgtggaggaggggctgggggtgtccagccccgcgcagccgccg
ccgccgccgcctccgccttcgcaggccccgggcggccccgcggccccgcagcccccgggc
ggccccgcggcacctcagccgccgcccgccgctccctacgggcagttccgcttcccgtcg
ccgccgcccggccatgacccgcccgcggcccccgcgggggctccgccggccgcccccgcc
gcccccccccagcccgcgggggctccgcagcagccgctgcccgaggagggcgcggggggc
gcgggcaccgggccggtatatgcggtggaacggcgggagtccgcgcacaagcccgaggca
ggtctctgggctctgatccccccaatttgggggtcccgcccccctctcccctgccttgtt
aagcaccgccgccgggacacgtgtccgcacccacgaacctcacgtagaaccctcagaacg
ggaccccaaaacacccccagaccccccccaaaacacaaccccagtcccctgcgggaggct
cagcgctggcggatttgcccgaatcgcggcgttttccccccagacttcccgcggaagcgg
aagcgcagccgctggaaccaggactcgctggagcagaagacggtgatcccggggatgccc
acggtgatcccgcccgggctgacgcgcgagcaggagcgcgcctacatcgtgcaactgcag
atcgaagacctgacccgcaaactgcgcacgggagacctgggcatcccccctaaccccgag
gacagtttgggggtgctgctctggaaccccccacccccagtttgggtgttccccctgagc
ccaactcggggctcgttaggtccccctccccgacccatctacaacagcgaggggaagcgc
ctgaacacgcgggagttccgcacacgcaagaagctggaggaggagagcacaacctcatca
ccggatggtggccctgatcccgacttcaagcccccagctgactacaagccaccggcgacg
cgggtgagcgacaaggtgatgatcccgcaggatgagtaccccgagatcaacttnnnnnnn
nnnnnnnnnnnnnagtaccccgagatcaacttcgtggggctcctcatcgggcccaggggg
aacactctgaagaacatcgagaaggagtgcaatgccaagatcatgatcaggggcaagggc
tcggtgaaggagggcaaggttggccgcaaggacgggcagatgctgccgggcgaggacgag
cccctgcacgccctcgtcaccgccaacaccatggagaacgtcaagaaagccgtggagcag
atcaggaacatcctgaagcagggcatcgagacccccgaggaccagaacgatctgcgcaag
atgcagctgcgggagctggcgcggctcaacgggaccctgcgggaggatgacaatcgcatc
ctgaggccgtggcagagcacagagactcgcagcatcaccaacaccacggtgtgcaccaag
tgcggcggagccgggcacatcgcctccgactgcaagttcgccaggcctggggacccgnag
gcgcaggacaaggcccggatggacaaggagtacctgtccctgatgtctgagctgggcgag
gcccggtgtccgtgagctccaacgccgcccacaacaacagccccttgtccagcagcccca
ccccaaaacccccctgaccccctttttttccccccccagagccgccccccctggatgagc
tcggctccctcggagaacncgccctaccacgggctgcacgggggccggggggcccggggt
ccccacagcttcccccaccccatggctggcatgggtggggggcacggggggcaccccctg
cagcacacccccaacgggccccccccgtggatgcagnccccaccatcccccatggggggg
gggccgcaccccccgggccaccccggcccccacccacatggatcagtacctgggaaatgc
gccggtgggctctggggtctatcgcctgcaccaggaaaaggtatgatgccaccgccgctg
ggtatgctgccccccgcccccccccgcccgggtgggcagcgccccccccctccggccccc
tccctccctg
DBGET
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