Serinus canaria (common canary): 103825413
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Entry
103825413 CDS
T05755
Name
(RefSeq) red-sensitive opsin
KO
K04251
long/medium wavelength-sensitive opsin
Organism
scan
Serinus canaria (common canary)
Brite
KEGG Orthology (KO) [BR:
scan00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
scan04030
]
103825413
G protein-coupled receptors [BR:
scan04030
]
Rhodopsin family
Vision
Opsin
103825413
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
7tm_1
7TM_GPCR_Srv
TctB
7TM_GPCR_Srsx
MpPF26
Motif
Other DBs
NCBI-GeneID:
103825413
NCBI-ProteinID:
XP_009098926
LinkDB
All DBs
Position
Unknown
AA seq
328 aa
AA seq
DB search
MATGVFDGAVFAARRRHDDDDTTRDSIFTYTNSNNTRGPFEGPNYHIAPRWVYNLTSLWM
IFVVVASVFTNGLVLVATAKFKKLRHPLNWILVNLAVADLGETVIASTISVVNQIFGYFI
LGHPMCVIEGYTVSACGITALWSLAIISWERWFVVCKPFGNIKFDGKLAVAGVLFSWIWS
CAWTAPPIFGWSRYWPHGLKTSCGPDVFSGTTDPGVQSYMVVLMVTCCFFPLAVIIFCYL
QVWLAIRAVAAQQKESESTQKAEKEVSRMVVVMILAYCFCWGPYTIFASFAAANPYAFHP
LTAALPAFFAKSATIYNPIIYVFMNRQF
NT seq
984 nt
NT seq
+upstream
nt +downstream
nt
atggcgacgggcgtttttgacggggcggttttcgccgcccgccggcgtcacgacgacgac
gacaccacgcgcgacagcatcttcacctacaccaacagcaacaacacgcgcggtcccttc
gagggccccaactaccacatcgctccgcgctgggtgtacaacctgacgtcgctgtggatg
atcttcgtggtggtggcctcggtgttcaccaacgggctggtgctggtggccacggccaag
ttcaagaagctgcggcaccccctgaactggatcctggtcaacctggccgtggccgacctg
ggcgagacggtcatcgccagcaccatcagcgtggtcaaccagatcttcggctacttcatc
ctcggccaccccatgtgcgtcatcgagggctacaccgtcagcgcctgcggcatcacggcg
ctctggtccctggccatcatctcctgggagcgctggttcgtggtctgcaaacccttcggc
aacatcaagttcgacgggaagctggcggtggccggggtcctcttctcctggatctggtcc
tgcgcctggaccgcgccccccatcttcggctggagcaggtactggccccacgggctgaag
acctcgtgcgggccggacgtgttcagcggcacgacggacccaggggtgcagtcctacatg
gtggtgctgatggtcacctgctgcttcttcccgctggccgtcatcatcttctgctacctg
caagtctggctggccatccgtgcggtggcggcccagcagaaggagtcggagtcgacgcag
aaggcggagaaggaggtgtcgcgcatggtggtggtgatgatcctggcctactgcttctgc
tgggggccctacaccatcttcgcctcgttcgccgccgccaacccgtacgccttccacccg
ctcaccgccgccctgcccgccttcttcgccaagagcgccaccatctacaaccccatcatc
tacgtcttcatgaaccgrcagttt
DBGET
integrated database retrieval system
