Serinus canaria (common canary): 103825659
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Entry
103825659 CDS
T05755
Name
(RefSeq) exosome complex component RRP46-like
KO
K12590
exosome complex component RRP46
Organism
scan
Serinus canaria (common canary)
Pathway
scan03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
scan00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
103825659
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
scan03019
]
103825659
Messenger RNA biogenesis [BR:
scan03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
103825659
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
103825659
NCBI-ProteinID:
XP_030085329
LinkDB
All DBs
Position
Unknown
AA seq
252 aa
AA seq
DB search
PFPQGLWCCLSQASPSLPRRAPLLHVTGLPFSPCQVKSSPPRGVAGGSRCWGQPADGELC
LLSVCPGDTSVLAGLYGPAEAKISKELPDRAALEVLLRPKVGLPGVLERRREQLLRQTCE
AVLLGVLHPRTAISLVLQVLSDAGSLLSCCLNAACMALLDAGLPLAALFCGVTCALQPDG
TILLDPTARQEQEARAVLTFAIASSERKVLMATTKGSCSVEEMQQCLAAAQRAASTIFQF
YRDSVRRRYSKC
NT seq
759 nt
NT seq
+upstream
nt +downstream
nt
cccttcccgcagggtctgtggtgctgcctgtcccaggcctccccttctctgcctcgcaga
gctccactgctgcacgtcacggggctccccttctcgccttgccaagtcaagtcctcacct
ccccgcggcgtggcagggggctcccgttgctgggggcagcctgctgacggtgagctctgt
ctgctctctgtgtgcccaggtgacacctcggtgctggccgggctgtacggccccgcggag
gccaagatcagcaaggagctgccggaccgggcggcgctggaggtgctgctgcgccccaag
gtggggctgccaggcgtgctggagcgcaggcgggagcagctgctgcggcagacgtgcgag
gccgtgctgctgggcgtgctgcacccgcgcaccgccatctccctggtgctgcaggtgctc
agcgacgccggctctctgctgtcctgctgcctgaacgccgcctgcatggcgctgctggat
gcagggctgcccctcgccgccctcttctgcggagtcacctgcgccctgcagcccgacggc
accatcctgctggaccccacggcccgacaggagcaggaggcacgcgccgtcctcaccttc
gccatcgccagcagcgagaggaaggtgctgatggccaccaccaagggcagctgctctgtg
gaggagatgcagcagtgcctggccgcggcccagcgtgccgccagcaccatcttccagttc
taccgcgactccgtgcgccgccgctactccaagtgctga
DBGET
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