Serinus canaria (common canary): 103825713
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Entry
103825713 CDS
T05755
Name
(RefSeq) LOW QUALITY PROTEIN: iroquois-class homeodomain protein IRX-5-like
KO
K24889
iroquois-class homeodomain protein IRX
Organism
scan
Serinus canaria (common canary)
Brite
KEGG Orthology (KO) [BR:
scan00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
scan03000
]
103825713
Transcription factors [BR:
scan03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain TALE
103825713
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Homeobox_KN
Homeodomain
Motif
Other DBs
NCBI-GeneID:
103825713
NCBI-ProteinID:
XP_030083493
LinkDB
All DBs
Position
Unknown
AA seq
471 aa
AA seq
DB search
MSYPQGYLYQPSASLALYSCPAYSTSVISGPXTDELGRSSSGSAFSPYAGSTAFTAPSPG
YNSHLQYGTDPAAAAAAAFTSYVGSPYDHTPGMAGSLGYHPYAAPLGSYPYGDPAYRKNA
TRDATATLKAWLNEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKMTWT
PRNRSEDEEEEENIDLEKNDEDEPQKLEEKGDPGTPDTGAVDPKAAPGCERLQESPGPRE
AESGLSDSDCKELAEERLDGPPVHHKAPGASPLGPCPAGRGPRRRAARSPRRTARPPPPP
GRRTPPTCTRCCPPPTAPLSSPQQAALAKPKLWSLAEIATSADKAKEAGGEAAPPGPAVL
GGSGPSRSPPRPRSPSAQCPFPNGAVLPRPLYYTAPFYPGYTNYGSFGALHGHPAGGPAA
TAPGAHFNGLNQTVLSRAESLAKDTKMIRSQSQVDLCKDSPYELKKGMSNI
NT seq
1416 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtatcctcagggttacttgtaccagccgtcagcgtccttggctctctattcctgc
ccggcgtacagcaccagcgtgatctccggaccanggaccgatgaacttgggagatcttct
tcgggctccgctttttccccttatgccggatctaccgcctttaccgccccttccccgggt
tacaactcccacctccagtacggcaccgacccggccgccgccgccgccgccgccttcact
tcctacgtgggctcgccctacgaccacacgccgggcatggccggttccctggggtaccac
ccgtacgcggcgccgctcggctcctacccctacggggaccctgcgtaccgcaagaacgcg
acgcgggacgccacggccaccctcaaggcctggctcaacgagcaccggaaaaacccctac
cccaccaagggcgagaagatcatgctggccatcatcaccaaaatgaccctcacccaggtc
tctacctggttcgccaacgcgcggcgacggctcaagaaggagaacaaaatgacttggacc
ccacgaaaccgcagcgaggacgaggaggaagaggagaacatcgacctggagaaaaacgac
gaggacgagccccagaaactggaggagaagggggaccccgggactccggacacaggagcg
gtggatcccaaggcagcgccgggctgcgagcgcctccaggagtcccccggcccccgggaa
gccgagagcggcctcagcgactcggattgcaaagagctagcggaggaacggctcgacggg
ccgcccgtccaccacaaggcgcccggcgcttccccgctgggaccgtgtccggcgggccgt
gggccgcgccggcgggcggcgaggagcccccgccgtaccgcccgccctccgccgccgccg
ggccgccgcacgccgccgacctgcacccgctgctgcccgccgccaacggcgcctctgtca
tcgccgcagcaggcggccctcgccaagcccaagctctggtcgttggccgagatcgccacc
tcggcggacaaggcgaaggaggccggcggcgaggcggcgccccccggccccgccgtgctg
ggcggcagcggcccgtctcgctcgccgccgcggccgcgctcgccctccgcgcagtgcccc
ttccccaacggggcggtcctgccccggccgctctactacacggcgcccttctaccccggc
tacacgaactacggctccttcggggccctgcacgggcaccccgccggcggccccgccgcc
accgcccccggcgcccacttcaatggattaaatcagactgtcctcagcagagccgagagc
ctggctaaagacactaaaatgatcaggagccagtcccaagtagacctttgcaaagactca
ccttacgaactgaagaaaggtatgtccaacatttaa
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