Serinus canaria (common canary): 103826039
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Entry
103826039 CDS
T05755
Symbol
PDLIM5
Name
(RefSeq) PDZ and LIM domain protein 5
KO
K19867
PDZ and LIM domain protein 5/6/7
Organism
scan
Serinus canaria (common canary)
Pathway
scan04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
scan00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
103826039 (PDLIM5)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
scan04990
]
103826039 (PDLIM5)
Domain-containing proteins not elsewhere classified [BR:
scan04990
]
LIM domain-containing proteins
PDZ-LIM family proteins
103826039 (PDLIM5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LIM
PDZ
PDZ_6
DUF4749
Motif
Other DBs
NCBI-GeneID:
103826039
NCBI-ProteinID:
XP_030094960
LinkDB
All DBs
Position
Unknown
AA seq
854 aa
AA seq
DB search
MSNYSVSLVGPAPWGFRLQGGKDFNVPLSISRLNDGGKAAQAHVGIGDVVLTIDGISTDG
MTHLEAQNKIKACTGNLNMTLQRVSSIQKPDHFHVTKAEPTEVVKPVPIASAVAPKVTAT
ASVAFNKTPRPFGAVTSSKVTSIPSPSSAFTPAQASAACAVPGVHANAKPNAEPWPAVPG
APKPAVPVPRQHGAADGAQDAAEGPRRGGRENQGESKQQNGPPRKHIVDTYTEFYHTPTH
SDASKKRLIEDTEDWHPRTGTTQSRSFRILAQITGTDHMKEPENEAGKKTKKRQTENGDF
SIPADLPDGAGTQDTCIILNKKSIATPTLEMPSAPEFPSTPLPPLRENNARPEPAAALLP
IADSCPGSVPPPRLSEHIAAPAPARKITVPAPDAASSLPADEAPPVPKMCAVATQTTEFP
LPADPAGGLPSPALHVGAALGLPPALARHEASLPTCETNSYNKISSFQSKSSVNYTSFCA
AKVMLEDPSGNLPILGPFPPPALSPFEQRSKIKSMAAAAVSAAIAVRARLHEPSAYRSLL
DALLITPVAKPPPLASAPSRKSTSALELPKSKSDSLEAAQPAPVRSVPACQDTVDVRPAP
ANSSPATVLKPAAPLGSAKGWQPPNQAAPVSGWTSNSIKSPGITAPSDKAATTPQLNEQD
TLVQRAEHIPAGKRTPMCAHCNQVIRGPFLVALGKSWHPEEFNCAHCKTSMAYIGFVEEK
GMLYCEVCYEKFFAPECSKCQRKILGEVINALKQTWHVSCFVCVACHNPIRNNVFHLEDG
DPYCETDYYALFGTMCHGCEFPIEAGDRFLEALGHTWHDTCFVCSVCSDSLEGQTFFSKK
DKPLCKKHAHSINI
NT seq
2565 nt
NT seq
+upstream
nt +downstream
nt
atgagcaactacagcgtgtctttggtcgggccggctccctggggtttcaggcttcaaggg
ggcaaggatttcaatgtgcctctgtctatctctcgacttaatgacggtggcaaggcagcc
caagcacatgtggggatcggtgatgtggttctcaccattgatgggataagcacggatggg
atgactcatctagaagcgcaaaacaagatcaaggcatgtacaggcaatttgaacatgact
ctgcaaagagtgtcttctatacaaaaacctgaccattttcatgtgacaaaggcagaacct
accgaagtagttaagcctgtgcccattgcctctgctgttgcacccaaagtcactgccaca
gccagcgtggctttcaataagacaccgaggccgtttggagctgtaacctcctccaaggtc
acctccatcccatcaccgtcctccgccttcacgccggcgcaggcgtcggccgcgtgtgcc
gtgcccggagtgcatgctaacgccaagcctaacgctgagccctggccagctgtgccgggc
gctcccaaacctgcagttcctgtcccacggcagcacggtgccgccgacggcgcccaggac
gcagccgaggggccgcgacgaggaggcagagagaaccagggggagagtaaacagcaaaat
ggccctcctcggaagcacatcgtggacacctacacggagttctaccacacgcccacccac
agcgacgccagcaagaagcggctgatcgaggacaccgaggactggcacccccgcaccggc
accacccagtcccgctccttccgcatcctcgcccagatcaccggcacggatcacatgaaa
gaaccagaaaatgaagctgggaagaagactaagaaaagacaaacagaaaatggagacttc
agcatacctgcagatctacctgatggagcaggaacccaggatacctgtattattttgaat
aaaaaatccatagctaccccgactttggagatgccatctgcaccagaatttccatccaca
cctttaccacctttgagagaaaacaatgctagaccagaacctgcagctgctcttttgccg
atagcagattcctgccctggcagtgtcccccctcccagactttctgaacatattgctgca
ccagctcctgcgaggaagataaccgtgcctgctccagatgcagcaagctctctgccggca
gatgaagcacctcctgtccccaagatgtgtgctgtggccacacaaaccaccgagttcccc
ctgcctgctgacccagctggggggctgccttctccagccctgcatgtgggagcagccctc
gggctgcctcctgcccttgccaggcatgaagcatctctgcctacttgtgaaacaaattct
tacaataaaatctcaagctttcagtctaaatcatctgtaaattatacaagcttctgcgct
gcaaaagtaatgctggaagatccttcgggaaatctgccgatccttggaccctttcctcct
ccagctctttctccttttgagcagagatcaaaaattaagagcatggctgctgctgcagtg
tctgctgctattgctgtccgggccagactccacgagcctagtgcctaccgctcgctgctg
gatgcgctgctcatcacgcctgttgcaaagcctcccccgctggccagcgcgccctccagg
aagtccacaagtgctctggagttgccaaagagcaagagtgattccctggaagctgcccag
cctgccccagtgaggagcgtccctgcctgccaggacaccgtggatgtgagacctgctcct
gccaactcctcacctgccacagtcctcaagccagcagcacccctgggttctgccaagggc
tggcagcctcccaaccaagcagctcctgtcagtggatggacatcaaacagtattaagtca
cctggaataactgccccgagtgacaaagctgcaacaacacctcagctaaatgagcaagac
acgttggttcagcgggcggagcatattccagcggggaagcgcactcccatgtgtgcacac
tgcaaccaggtcatcagaggacccttcttggtggctttgggaaagtcatggcatccagag
gagtttaattgtgcccactgcaaaacctccatggcatacataggatttgtggaagagaaa
gggatgctgtattgtgaggtctgctatgagaagttctttgcccctgagtgttcaaagtgc
cagaggaagatccttggggaagtaataaatgctttgaaacaaacttggcacgtttcctgc
ttcgtgtgtgtggcctgtcataaccccatccgcaataatgtttttcacttagaagatggt
gatccctactgtgagacagattactatgccctctttggtacgatgtgccacggctgtgaa
ttccccattgaagctggagacaggtttcttgaagccctgggccacacttggcatgacacc
tgctttgtatgctctgtatgtagtgacagtttggagggccagactttcttctccaagaag
gacaagccactgtgcaagaaacacgcccactctatcaacatctga
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