Serinus canaria (common canary): 103826051
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Entry
103826051 CDS
T05755
Symbol
POLR2B
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB2
KO
K03010
DNA-directed RNA polymerase II subunit RPB2 [EC:
2.7.7.6
]
Organism
scan
Serinus canaria (common canary)
Pathway
scan03020
RNA polymerase
scan03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
scan00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
103826051 (POLR2B)
09124 Replication and repair
03420 Nucleotide excision repair
103826051 (POLR2B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
scan03021
]
103826051 (POLR2B)
03400 DNA repair and recombination proteins [BR:
scan03400
]
103826051 (POLR2B)
Enzymes [BR:
scan01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
103826051 (POLR2B)
Transcription machinery [BR:
scan03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
103826051 (POLR2B)
DNA repair and recombination proteins [BR:
scan03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
103826051 (POLR2B)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_2
RNA_pol_Rpb2_7
RNA_pol_Rpb2_4
RNA_pol_Rpb2_3
RNA_pol_Rpb2_5
DUF5817
Motif
Other DBs
NCBI-GeneID:
103826051
NCBI-ProteinID:
XP_009099562
LinkDB
All DBs
Position
Unknown
AA seq
1174 aa
AA seq
DB search
MYDADEDMQYDEDDDEITPDLWQEACWIVISSYFDEKGLVRQQLDSFDEFIQMSVQRIVE
DAPPIDLQAEAQHASGEVEEPPRYLLKFEQIYLSKPTHWERDGAPSPMMPNEARLRNLTY
SAPLYVDITKTVIKEGEDQLQTQHQKTFIGKIPIMLRSTYCLLNGLTDRDLCELNECPLD
PGGYFIINGSEKVLIAQEKMATNTVYVFAKKDSKYAYTGECRSCLENSSRPTSTIWVSML
ARGGQGAKKSAIGQRIVATLPYIKQEVPIIIVFRALGFVSDRDILEHIIYDFEDPEMMEM
VKPSLDEAFVIQEQNVALNFIGSRGAKPGVTKEKRIKYAKEVLQKEMLPHVGVSDFCETK
KAYFLGYMVHRLLLAALGRRELDDRDHYGNKRLDLAGPLLAFLFRGMFKNLLKEVRIYAQ
KFIDRGKDFNLELAIKTRIISDGLKYSLATGNWGDQKKAHQARAGVSQVLNRLTFASTLS
HLRRLNSPIGRDGKLAKPRQLHNTLWGMVCPAETPEGHAVGLVKNLALMAYISVGSQPSP
ILEFLEEWSMENLEEISPAAIADATKIFVNGCWVGIHKDPEQLMNTLRKLRRQMDIIVSE
VSMIRDIREREIRIYTDAGRICRPLLIVEKQKLLLKKRHIDQLKEREYNNYSWQDLVASG
VVEYIDTLEEETVMLAMTPDDLQEKGVAYCSTYTHCEIHPSMILGVCASIIPFPDHNQSP
RNTYQSAMGKQAMGVYITNFHVRMDTLAHVLYYPQKPLVTTRSMEYLRFRELPAGINSIV
AIASYTGYNQEDSVIMNRSAVDRGFFRSVFYRSYKEQESKKGYDQEEVFEKPTRETCQGM
RHAIYDKLDDDGLIAPGVRVSGDDVIIGKTVTLPENEDELESTNRRFTKRDCSTFLRTSE
TGIVDQVMVTLNQEGYKFCKIRVRSVRIPQIGDKFASRHGQKGTCGIQYRQEDMPFTCEG
ITPDIIINPHAIPSRMTIGHLIECLQGKVSANKGEIGDATPFNDAVNVQKISNLLSDYGY
HLRGNEVLYNGFTGRKITSQIFIGPTYYQRLKHMVDDKIHSRARGPIQILNRQPMEGRSR
DGGLRFGEMERDCQIAHGAAQFLRERLFEASDPYQVHVCNLCGIMAIANTRTHTYECRGC
RNKTQISLVRMPYACKLLFQELMSMSIAPRMMSV
NT seq
3525 nt
NT seq
+upstream
nt +downstream
nt
atgtacgacgcggatgaagatatgcaatatgatgaagacgatgatgaaatcacgcccgac
ctgtggcaggaagcctgctggattgttattagctcctattttgatgaaaagggtttagtc
aggcaacagttggattcctttgatgaatttattcagatgtctgtgcagagaattgttgaa
gatgctccaccaattgatttgcaagctgaagcccagcatgcctcaggagaagtggaagag
ccaccccggtatctgttgaagtttgaacaaatctatctctccaaacctacacattgggaa
agagatggagcaccctcacctatgatgccaaatgaagccagactgagaaaccttacgtat
tctgcccccttgtatgtggatataactaaaacagttattaaagaaggggaggaccaattg
cagacccagcatcagaaaacctttataggaaaaattcctatcatgctgcgttccacgtac
tgtttgctgaatggcttaactgaccgtgatctttgtgagctgaacgagtgcccacttgat
cctggtggctacttcatcatcaatggatcagaaaaggttctgattgctcaggagaaaatg
gctacaaacacagtgtatgtgtttgcaaagaaagattcaaaatatgcctacacaggagag
tgtaggtcttgtctggaaaattcctctcgaccaacaagtactatatgggtcagcatgctg
gccagaggtggacagggtgcaaagaagagtgccatcggtcagcgcatcgtagcaactctg
ccgtatatcaaacaagaggtgcccatcatcattgtcttccgtgcactcggctttgtgtcc
gacagggacatcctagagcacatcatctatgattttgaagacccagaaatgatggaaatg
gtcaaaccatctctggatgaagcatttgtcattcaggagcaaaatgttgccctaaacttc
attggctcaagaggtgccaagccaggtgtcaccaaagagaagagaatcaagtatgccaaa
gaagtcttgcagaaagaaatgctcccacatgttggtgtcagtgacttctgtgaaaccaaa
aaggcctattttctagggtatatggttcatagactgttgctggcagcactgggaagaaga
gagctggatgacagagatcattatggcaacaaaagactggatcttgctgggccactcttg
gctttcctgttcagaggaatgttcaagaatttgctgaaggaagtgagaatatatgcacag
aagttcattgacagagggaaagatttcaacttggagttggcaattaaaacaagaattatt
tcagacggtttgaaatattcattggcaactggaaactggggtgaccagaagaaagctcat
caggctagagcaggagtatctcaggtgttgaaccgcctgacttttgcatccacactttcc
cacctgagacgcctgaattctccgattgggagagatggaaaactggccaagccccggcag
ctgcacaacaccctgtggggaatggtttgccctgctgagacccctgagggtcatgcagta
ggacttgtgaagaacttagccctgatggcttacatttctgtggggtctcagccatcccca
attttggaattcttggaagagtggagtatggaaaacctagaagaaatatctccagcagca
atagctgatgctaccaagatatttgttaatggctgttgggtaggaatacacaaagatccg
gagcagctgatgaataccctaaggaagcttcgtcgtcagatggacatcattgtctcagag
gtctccatgattagagatattcgtgagcgggaaatccgcatttacactgatgcaggcaga
atttgtcggccccttttgattgtggagaaacagaagttgctgctgaagaaaaggcacata
gaccaactgaaggaacgagagtataacaattacagttggcaggatctcgtggccagcggt
gtggtagagtacattgacaccctggaagaagagactgtgatgctggcaatgactccagat
gacttgcaggagaaaggtgtggcatactgctcaacatacacacactgtgagattcaccca
tccatgatcctgggagtgtgtgcatctattatccctttccctgatcacaaccagtctccc
aggaacacataccagtctgctatgggtaagcaggctatgggagtctacatcaccaacttc
catgtccgtatggatacactggcacacgtgctgtattatccccagaagcccctggtaaca
acacgctccatggagtacttgaggttcagagagctaccagcaggtatcaactcgattgta
gccattgcatcatacacaggctataaccaggaagactctgtcattatgaaccgttctgct
gttgacagaggctttttcaggtctgtgttctatcgctcatacaaagagcaggagtctaag
aaagggtacgaccaagaggaagtttttgagaagcctacacgtgaaacttgccaaggtatg
agacacgcaatctatgacaaacttgatgatgatggtttgatagcccctggggtacgtgtg
tctggggatgatgtcatcattggcaaaacagtcacactgccagaaaatgaagatgagctg
gaaagcaccaacaggcgcttcacgaagagagattgcagcaccttcctgcggaccagtgag
actggcattgtagatcaggtcatggtaaccctgaaccaggaaggatacaaattctgcaag
ataagggtacgttctgtaagaattccacaaattggagataaatttgctagcagacacggt
cagaaaggaacctgtgggatccagtacaggcaagaggatatgcccttcacgtgtgaaggc
atcacacctgatatcattatcaacccccatgccatcccttcccgaatgaccattggtcac
ttgattgagtgtcttcagggcaaggtgtctgcaaacaagggagaaattggtgatgctaca
ccttttaacgatgctgtcaacgtgcagaagatttccaaccttttatcagattatggctat
catctaagaggaaatgaggtcctctacaatggcttcactggtcgaaaaatcacatcccag
atcttcattggtcctacctattaccagcgcttgaagcacatggtggatgacaaaatccat
tctcgtgcacgagggccaatccagatccttaacagacagcccatggaaggcagatctcgt
gatggtggccttcgctttggagaaatggaacgagattgccagattgctcatggagcagcc
cagttcttgagagaaagattgtttgaagcttcagacccataccaggtccatgtgtgcaac
ctctgtggaatcatggccattgcaaacacaaggactcacacctacgaatgccgcgggtgc
cggaataaaactcagatatctttggttcgaatgccctacgcctgcaaacttctcttccag
gaactgatgtccatgagtattgcacctcgtatgatgagtgtttag
DBGET
integrated database retrieval system
