KEGG   Serinus canaria (common canary): 103826112
Entry
103826112         CDS       T05755                                 
Symbol
POLR1A
Name
(RefSeq) DNA-directed RNA polymerase I subunit RPA1
  KO
K02999  DNA-directed RNA polymerase I subunit RPA1 [EC:2.7.7.6]
Organism
scan  Serinus canaria (common canary)
Pathway
scan03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:scan00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    103826112 (POLR1A)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:scan03021]
    103826112 (POLR1A)
Enzymes [BR:scan01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     103826112 (POLR1A)
Transcription machinery [BR:scan03021]
 Eukaryotic type
  RNA polymerase I system
   RNA polymerase I
    Core subunits
     103826112 (POLR1A)
SSDB
Motif
Pfam: RNA_pol_Rpb1_5 RNA_pol_Rpb1_2 RNA_pol_Rpb1_3 RNA_pol_Rpb1_1 RNA_pol_Rpb1_4 HMG_box
Other DBs
NCBI-GeneID: 103826112
NCBI-ProteinID: XP_009099645
UniProt: A0A8C9NLP5
LinkDB
Position
Unknown
AA seq 1708 aa
MRPPKVVPWRRLVGVSFGMYTAEEIRKLSVKPITNPQYLDNVGNPAVNGLYDLALGPPDS
REVCATCMQNFSNCPGHFGHIELPLPVYNPLFFDKLYLLIRGSCLNCHMLTCPRAVVHLL
LSQLKVLQKGLLHAVHDLEIILNKFVEQCADATGSEIEEELNRHVQEMLQSSQTRDRCSN
VKNVCECRNKLISQFWKAHMASKKCPNCKSRRSLVRKEHNSKLTVTYPSSVYHKLGEEGI
LDETAGIDESQLGKRGYLTPMTAKEYILALWKNEGFFLRYLFPGMDPHESSEFSPDMFFL
DLLVVPPSRYRPVNRLGDRLFTNGQTVNLQAVMKDAQLIRKLLVFMAKEQCQPIKITEEI
QTETGEDAEPLDRSVLTTIPGQSIADKLYNTWIRLQSHVNIVFDSDMDKLITEKYPGIRQ
LLEKKEGLFRKHMMGKRVDFAARSVICPDMYIGTNEIGIPMVFATKLTYPQPVTPWNVKE
LRQAVINGPKVHPGASMVINEDGSRTVLSATSLTQREAIAKQLLTPSSGAPQTGLKIVCR
HIRNGDVLLLNRQPTLHRPSIQAHRARILPGEKVLRLHYANCKAYNADFDGDEMNAHFPQ
SELGRAEAYTLAITDKQYLVPKDGKPLPGLIQDHMISGVSMTLRGCFFTREQYMELVYRG
LTDKKGRIKIFPPAIMKPQRLWTGKQVVSTLLINIIPDNHASLNLTGKAKIGGRAWVKAP
AKGCLNLDSMCESQVIIRDGELLCGVLDKAHFGSSAYGLVHCCYEIYGGETSGKVLTCLG
RLFTAYLQLYRGFTMGIEDILVKREADHKRKKIIERSRQSGIGAVRAALNLPETASCEEV
QGKWQDAHLCKDQRDFNMVDMKFKEEVNNYNNEVNKVCMPLGLHRSFPENNLQLMVQSGA
KGSTVNTMQISCLLGQIELEGRRPPLMASGKSLPCFQPYDFSPSSGGFVTGRFLTGIKPS
EFFFHCMAGREGLVDTAVKTSRSGYLQRCIIKHLEGLVVQYDLTVRDSDGSVVQFLYGED
GLDIPKTQFLQPEQFPFIAENYEVIQKTNHLDEALARMESHQANQQFKAIKKWRARHQNS
VQREGGFLLFSQKKLASLKAQLPGGEIKNGRDPATLQLLKMWYELDEKKRRKYLKKTNKC
PDPSLGVWRPDTYFASVSETFEKGVEGYISKWQSENSRSFMHPALSSDRLKDLLYLKWQR
SLCDPGEAVGLLAAQSIGEPSTQMTLNTFHFAGRGEMNVTLGIPRLREILMVASSNIKTP
MMSVPVLNTKKALKKVKQLKKLLTRVCLAEVLEKVDIEESLHVKHKLNKHRLYKIKFHFL
PHECYREEKCVKPRQILHFMETRFFKVLLEAIKKKTTKMASFNEVSTRKTTRKDLDDDQD
KTLNSLEAVAEEEENIVDAEADEGDGDATETKRRKNQEEEVDYESEEENGEENVNENPED
EEAESEKEEGTPGAEEDQNRAEGEDSQHLSFVSQTKKGKDQLLKSAEVRVSAVVESHPSI
QDYTFDTENELWCEVSLALPLTKVYFDLSSLLASLARSTVIHEVKGITRCLLNESTSKEG
QKESVLQTEGINLAELFRYSDILDLNRLYCNDIHSMANNYGIESALRVIIKEIKDVFAVY
GIVVDPRHLSLVADYMCFEGFYKPLNRIGIQSNSSPLQQMTFETSYKFLKDATMMGAHDE
LRSPSACLVVGKVVKGGTGLFDLKQPLT
NT seq 5127 nt   +upstreamnt  +downstreamnt
atgaggccgcccaaagtggtgccgtggcggcggctggttggggtgtccttcgggatgtac
acggccgaggagatcaggaagctgagtgtgaagcccataaccaaccctcagtacctggac
aatgtgggcaatcctgctgtgaacgggctctacgacctggccctggggcccccggactcc
cgggaagtgtgtgccacctgcatgcagaacttcagcaactgccccggacactttggccac
atagagctgcctctgcccgtctacaaccccctgttcttcgataaactgtaccttttgatc
cgagggtcctgtttgaattgccacatgctgacatgtccccgagccgtggttcacctgctg
ctgagccagctgaaggtgctgcagaaagggctgctccatgctgtccatgacctcgaaatc
attctgaacaagtttgtagagcagtgtgcagatgcaacgggctcagaaattgaggaggag
ttgaatcgccatgtgcaggaaatgttacaaagctcccaaacaagagataggtgctcaaat
gtcaaaaatgtttgtgagtgtagaaataaactgatatcacagttctggaaagcacacatg
gcttcaaagaaatgcccaaactgcaagtccaggagatcactggtgcgaaaggagcacaac
agcaagctgacagtcacctatccttcttcagtgtaccataagttaggagaggaaggcatt
ctggatgaaacagcaggtattgatgaaagccagttagggaagagaggatacctgacacca
atgactgccaaggaatacatcctggctctgtggaagaatgaaggtttctttctgcgttat
ctcttccctggaatggatccccatgagagttcagaattcagtccagacatgttttttcta
gacctgcttgtggttccaccttcaaggtaccgtcctgtgaatcgcctcggagatcgcttg
ttcacaaatgggcagactgtgaacttgcaggctgtgatgaaggatgcccaactgataagg
aagctcttggttttcatggccaaagaacagtgtcagccaataaagatcacagaagaaatt
caaacagagacaggagaggatgctgaacctctggaccgttctgtgctgacaacaattcca
ggacagagcattgcagataagctgtacaacacctggatacgtctccagagccatgtcaac
attgtgtttgatagtgacatggacaagctgataacagaaaaataccctggtattcgtcag
ctgttggagaagaaggaagggctgttccgcaagcacatgatggggaagcgcgtggatttc
gctgctcggtccgtcatttgccccgacatgtacattgggaccaacgagattggcatcccc
atggtatttgccaccaaactgacctaccctcagccagtcactccctggaatgtcaaagag
ctgaggcaggctgtcatcaatggccccaaggtgcaccctggggcctccatggtcatcaac
gaggacgggtctcgcacggtgctgagcgccaccagcctgacccagcgcgaggccatcgcc
aagcagctccttaccccctcctcaggggcaccccagacaggcctgaagattgtgtgtcgg
cacatcaggaacggggatgtgctgctgctgaaccggcagcccacgctgcacagaccctcc
atccaggctcaccgcgcccgcatcctgcccggcgagaaggtgctgaggctgcactacgcc
aactgcaaggcttacaatgctgacttcgatggggacgaaatgaatgcccacttcccacag
agtgagctgggcagagcagaggcctacaccttagccatcactgacaaacagtacctggtg
ccaaaggatgggaagccacttcctggcttgatccaggaccacatgatttctggagtcagc
atgacactgcggggctgctttttcaccagagagcagtacatggagctggtgtaccgaggg
ctgacagacaaaaagggaagaattaaaatctttcctccagccatcatgaagccacagcga
ttatggacaggaaagcaggttgtttccacattgttaataaacatcattccagacaaccat
gcttcactgaacttgactgggaaagcaaaaattggtgggagagcctgggtaaaggcacct
gcaaaaggatgtctgaatcttgattcaatgtgtgaatctcaggttattatcagagatggg
gaattactgtgtggagtcctggacaaagctcactttggcagctctgcctatgggctggtc
cactgctgctatgagatctatgggggtgaaaccagtgggaaagtgctgacgtgtctgggg
cgcctcttcactgcttacctgcagctctacagggggttcaccatggggattgaagatatt
ttggttaaacgtgaagcagaccacaaaagaaaaaaaatcattgaaaggtcaaggcagagt
ggtattggagctgttagagctgctcttaatttgccagaaacagcatcatgtgaggaggtc
caagggaagtggcaggatgcccatctctgcaaagaccagagggattttaacatggttgat
atgaaattcaaggaggaagtaaacaattacaacaatgaagtcaacaaggtttgcatgccc
cttggtctccacaggagctttccagagaacaatttgcagttgatggtacagtcaggagcc
aaaggatccactgtaaacacaatgcagatttcttgtttgctgggccagattgagctggaa
ggccgaagacccccactgatggcatctggcaaatcactgccatgtttccagccttatgac
ttttcccctagctcaggaggatttgtgactggcagatttctcactgggatcaaaccttct
gaattcttctttcactgcatggctggcagggaaggtcttgtggatacagctgtcaaaacc
agccgttctgggtacctgcaaaggtgtatcataaaacatttggaaggactggtggttcag
tatgacctgactgtacgagatagtgatggcagcgtggtgcagtttctgtatggagaagat
gggcttgatatccctaaaactcagttcttgcaacctgagcagtttcctttcattgcagaa
aactatgaggtaatccagaagacaaaccatctggatgaagctttagcaaggatggagtct
caccaagctaaccagcagttcaaagccatcaaaaagtggcgagccagacaccaaaactct
gtgcaaagagaaggaggctttctgttgttttcccaaaagaaattggcaagtttgaaagca
cagcttccaggaggtgaaatcaagaatggaagagatcctgctactttacagttgttgaag
atgtggtatgagcttgatgagaagaaacgaaggaagtacctgaagaagacaaataagtgt
cctgacccaagcctcggggtttggcgtccagatacttattttgcatctgtttcagaaaca
tttgaaaagggagttgaaggctatatcagtaaatggcaatctgagaacagccggagtttc
atgcacccagcactttcttctgatagattaaaggatctgttgtatttaaagtggcagcgt
tctctctgtgacccaggagaagctgtggggcttcttgctgctcagagcattggggaacct
tcaacacagatgactctgaacacctttcactttgctggcagaggtgaaatgaatgtcaca
ttgggtattccaaggttgagggaaatactgatggtggccagctcaaacattaaaacaccg
atgatgagtgttcctgtgctcaataccaagaaagctctcaaaaaggtgaaacagcttaag
aaactgctcacaagagtgtgcttggctgaggtcttggagaaagtggacatcgaggaatcc
ctgcatgtgaagcacaagctgaacaagcatcgcctctacaaaatcaaattccatttcttg
ccccatgaatgttaccgagaggagaagtgtgtgaagcccaggcagatcttgcacttcatg
gaaacaaggttctttaaagttcttctggaagcaattaaaaagaagaccacaaagatggca
tcttttaatgaagtcagcactcggaagacaactcggaaggatttagatgatgaccaagac
aagacactgaacagtctggaagctgtagcagaggaagaagagaacattgttgatgcagaa
gctgatgaaggggatggtgatgctacagaaacaaaacggaggaagaaccaggaagaagag
gttgattatgagagtgaagaagagaatggggaagaaaacgttaatgagaatccagaagat
gaagaggctgaatctgaaaaagaagaagggactcctggtgctgaagaggatcagaacaga
gcagagggtgaagattctcagcatctttcctttgtgtctcagactaaaaaagggaaagat
caattgcttaagtcagcagaggtgcgagtgagcgctgttgtggagagccacccatccata
caggattacacctttgacactgaaaatgagctttggtgtgaggtttccttggcactgcca
ctgaccaaggtgtactttgacctctcctccctgctggcatccctggcgcgcagcacggtg
atccacgaggtgaagggcatcacacgctgcctgctgaatgagagcaccagcaaggaggga
cagaaggaatctgttctccagacagaagggataaacctggcagagctcttcagatactct
gatattttggatttgaacagactttattgcaatgatatccattccatggctaataattat
ggaattgaatcagccctgagggtgattataaaggaaataaaagatgtatttgctgtatat
ggaattgtggtagaccctcgacacctttcacttgtggcagattacatgtgttttgaagga
ttttacaaaccactgaatcgcattggaattcagtccaactcctcccctctgcagcagatg
acgtttgaaaccagctacaaattcttgaaggatgcaacaatgatgggtgcccacgatgag
ctgcgatccccttcagcctgcctggtggttggaaaggttgtcaaaggagggactggcttg
tttgacctcaagcagcccctgacatag

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