Entry |
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Symbol |
POLR1A
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Name |
(RefSeq) DNA-directed RNA polymerase I subunit RPA1
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KO |
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Organism |
scan Serinus canaria (common canary)
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Pathway |
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Brite |
KEGG Orthology (KO) [BR:scan00001]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
103826112 (POLR1A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:scan03021]
103826112 (POLR1A)
Enzymes [BR:scan01000]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
103826112 (POLR1A)
Transcription machinery [BR:scan03021]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
103826112 (POLR1A)
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SSDB |
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Motif |
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Other DBs |
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LinkDB |
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Position |
Unknown
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AA seq |
1708 aa
MRPPKVVPWRRLVGVSFGMYTAEEIRKLSVKPITNPQYLDNVGNPAVNGLYDLALGPPDS
REVCATCMQNFSNCPGHFGHIELPLPVYNPLFFDKLYLLIRGSCLNCHMLTCPRAVVHLL
LSQLKVLQKGLLHAVHDLEIILNKFVEQCADATGSEIEEELNRHVQEMLQSSQTRDRCSN
VKNVCECRNKLISQFWKAHMASKKCPNCKSRRSLVRKEHNSKLTVTYPSSVYHKLGEEGI
LDETAGIDESQLGKRGYLTPMTAKEYILALWKNEGFFLRYLFPGMDPHESSEFSPDMFFL
DLLVVPPSRYRPVNRLGDRLFTNGQTVNLQAVMKDAQLIRKLLVFMAKEQCQPIKITEEI
QTETGEDAEPLDRSVLTTIPGQSIADKLYNTWIRLQSHVNIVFDSDMDKLITEKYPGIRQ
LLEKKEGLFRKHMMGKRVDFAARSVICPDMYIGTNEIGIPMVFATKLTYPQPVTPWNVKE
LRQAVINGPKVHPGASMVINEDGSRTVLSATSLTQREAIAKQLLTPSSGAPQTGLKIVCR
HIRNGDVLLLNRQPTLHRPSIQAHRARILPGEKVLRLHYANCKAYNADFDGDEMNAHFPQ
SELGRAEAYTLAITDKQYLVPKDGKPLPGLIQDHMISGVSMTLRGCFFTREQYMELVYRG
LTDKKGRIKIFPPAIMKPQRLWTGKQVVSTLLINIIPDNHASLNLTGKAKIGGRAWVKAP
AKGCLNLDSMCESQVIIRDGELLCGVLDKAHFGSSAYGLVHCCYEIYGGETSGKVLTCLG
RLFTAYLQLYRGFTMGIEDILVKREADHKRKKIIERSRQSGIGAVRAALNLPETASCEEV
QGKWQDAHLCKDQRDFNMVDMKFKEEVNNYNNEVNKVCMPLGLHRSFPENNLQLMVQSGA
KGSTVNTMQISCLLGQIELEGRRPPLMASGKSLPCFQPYDFSPSSGGFVTGRFLTGIKPS
EFFFHCMAGREGLVDTAVKTSRSGYLQRCIIKHLEGLVVQYDLTVRDSDGSVVQFLYGED
GLDIPKTQFLQPEQFPFIAENYEVIQKTNHLDEALARMESHQANQQFKAIKKWRARHQNS
VQREGGFLLFSQKKLASLKAQLPGGEIKNGRDPATLQLLKMWYELDEKKRRKYLKKTNKC
PDPSLGVWRPDTYFASVSETFEKGVEGYISKWQSENSRSFMHPALSSDRLKDLLYLKWQR
SLCDPGEAVGLLAAQSIGEPSTQMTLNTFHFAGRGEMNVTLGIPRLREILMVASSNIKTP
MMSVPVLNTKKALKKVKQLKKLLTRVCLAEVLEKVDIEESLHVKHKLNKHRLYKIKFHFL
PHECYREEKCVKPRQILHFMETRFFKVLLEAIKKKTTKMASFNEVSTRKTTRKDLDDDQD
KTLNSLEAVAEEEENIVDAEADEGDGDATETKRRKNQEEEVDYESEEENGEENVNENPED
EEAESEKEEGTPGAEEDQNRAEGEDSQHLSFVSQTKKGKDQLLKSAEVRVSAVVESHPSI
QDYTFDTENELWCEVSLALPLTKVYFDLSSLLASLARSTVIHEVKGITRCLLNESTSKEG
QKESVLQTEGINLAELFRYSDILDLNRLYCNDIHSMANNYGIESALRVIIKEIKDVFAVY
GIVVDPRHLSLVADYMCFEGFYKPLNRIGIQSNSSPLQQMTFETSYKFLKDATMMGAHDE
LRSPSACLVVGKVVKGGTGLFDLKQPLT |
NT seq |
5127 nt +upstreamnt +downstreamnt
atgaggccgcccaaagtggtgccgtggcggcggctggttggggtgtccttcgggatgtac
acggccgaggagatcaggaagctgagtgtgaagcccataaccaaccctcagtacctggac
aatgtgggcaatcctgctgtgaacgggctctacgacctggccctggggcccccggactcc
cgggaagtgtgtgccacctgcatgcagaacttcagcaactgccccggacactttggccac
atagagctgcctctgcccgtctacaaccccctgttcttcgataaactgtaccttttgatc
cgagggtcctgtttgaattgccacatgctgacatgtccccgagccgtggttcacctgctg
ctgagccagctgaaggtgctgcagaaagggctgctccatgctgtccatgacctcgaaatc
attctgaacaagtttgtagagcagtgtgcagatgcaacgggctcagaaattgaggaggag
ttgaatcgccatgtgcaggaaatgttacaaagctcccaaacaagagataggtgctcaaat
gtcaaaaatgtttgtgagtgtagaaataaactgatatcacagttctggaaagcacacatg
gcttcaaagaaatgcccaaactgcaagtccaggagatcactggtgcgaaaggagcacaac
agcaagctgacagtcacctatccttcttcagtgtaccataagttaggagaggaaggcatt
ctggatgaaacagcaggtattgatgaaagccagttagggaagagaggatacctgacacca
atgactgccaaggaatacatcctggctctgtggaagaatgaaggtttctttctgcgttat
ctcttccctggaatggatccccatgagagttcagaattcagtccagacatgttttttcta
gacctgcttgtggttccaccttcaaggtaccgtcctgtgaatcgcctcggagatcgcttg
ttcacaaatgggcagactgtgaacttgcaggctgtgatgaaggatgcccaactgataagg
aagctcttggttttcatggccaaagaacagtgtcagccaataaagatcacagaagaaatt
caaacagagacaggagaggatgctgaacctctggaccgttctgtgctgacaacaattcca
ggacagagcattgcagataagctgtacaacacctggatacgtctccagagccatgtcaac
attgtgtttgatagtgacatggacaagctgataacagaaaaataccctggtattcgtcag
ctgttggagaagaaggaagggctgttccgcaagcacatgatggggaagcgcgtggatttc
gctgctcggtccgtcatttgccccgacatgtacattgggaccaacgagattggcatcccc
atggtatttgccaccaaactgacctaccctcagccagtcactccctggaatgtcaaagag
ctgaggcaggctgtcatcaatggccccaaggtgcaccctggggcctccatggtcatcaac
gaggacgggtctcgcacggtgctgagcgccaccagcctgacccagcgcgaggccatcgcc
aagcagctccttaccccctcctcaggggcaccccagacaggcctgaagattgtgtgtcgg
cacatcaggaacggggatgtgctgctgctgaaccggcagcccacgctgcacagaccctcc
atccaggctcaccgcgcccgcatcctgcccggcgagaaggtgctgaggctgcactacgcc
aactgcaaggcttacaatgctgacttcgatggggacgaaatgaatgcccacttcccacag
agtgagctgggcagagcagaggcctacaccttagccatcactgacaaacagtacctggtg
ccaaaggatgggaagccacttcctggcttgatccaggaccacatgatttctggagtcagc
atgacactgcggggctgctttttcaccagagagcagtacatggagctggtgtaccgaggg
ctgacagacaaaaagggaagaattaaaatctttcctccagccatcatgaagccacagcga
ttatggacaggaaagcaggttgtttccacattgttaataaacatcattccagacaaccat
gcttcactgaacttgactgggaaagcaaaaattggtgggagagcctgggtaaaggcacct
gcaaaaggatgtctgaatcttgattcaatgtgtgaatctcaggttattatcagagatggg
gaattactgtgtggagtcctggacaaagctcactttggcagctctgcctatgggctggtc
cactgctgctatgagatctatgggggtgaaaccagtgggaaagtgctgacgtgtctgggg
cgcctcttcactgcttacctgcagctctacagggggttcaccatggggattgaagatatt
ttggttaaacgtgaagcagaccacaaaagaaaaaaaatcattgaaaggtcaaggcagagt
ggtattggagctgttagagctgctcttaatttgccagaaacagcatcatgtgaggaggtc
caagggaagtggcaggatgcccatctctgcaaagaccagagggattttaacatggttgat
atgaaattcaaggaggaagtaaacaattacaacaatgaagtcaacaaggtttgcatgccc
cttggtctccacaggagctttccagagaacaatttgcagttgatggtacagtcaggagcc
aaaggatccactgtaaacacaatgcagatttcttgtttgctgggccagattgagctggaa
ggccgaagacccccactgatggcatctggcaaatcactgccatgtttccagccttatgac
ttttcccctagctcaggaggatttgtgactggcagatttctcactgggatcaaaccttct
gaattcttctttcactgcatggctggcagggaaggtcttgtggatacagctgtcaaaacc
agccgttctgggtacctgcaaaggtgtatcataaaacatttggaaggactggtggttcag
tatgacctgactgtacgagatagtgatggcagcgtggtgcagtttctgtatggagaagat
gggcttgatatccctaaaactcagttcttgcaacctgagcagtttcctttcattgcagaa
aactatgaggtaatccagaagacaaaccatctggatgaagctttagcaaggatggagtct
caccaagctaaccagcagttcaaagccatcaaaaagtggcgagccagacaccaaaactct
gtgcaaagagaaggaggctttctgttgttttcccaaaagaaattggcaagtttgaaagca
cagcttccaggaggtgaaatcaagaatggaagagatcctgctactttacagttgttgaag
atgtggtatgagcttgatgagaagaaacgaaggaagtacctgaagaagacaaataagtgt
cctgacccaagcctcggggtttggcgtccagatacttattttgcatctgtttcagaaaca
tttgaaaagggagttgaaggctatatcagtaaatggcaatctgagaacagccggagtttc
atgcacccagcactttcttctgatagattaaaggatctgttgtatttaaagtggcagcgt
tctctctgtgacccaggagaagctgtggggcttcttgctgctcagagcattggggaacct
tcaacacagatgactctgaacacctttcactttgctggcagaggtgaaatgaatgtcaca
ttgggtattccaaggttgagggaaatactgatggtggccagctcaaacattaaaacaccg
atgatgagtgttcctgtgctcaataccaagaaagctctcaaaaaggtgaaacagcttaag
aaactgctcacaagagtgtgcttggctgaggtcttggagaaagtggacatcgaggaatcc
ctgcatgtgaagcacaagctgaacaagcatcgcctctacaaaatcaaattccatttcttg
ccccatgaatgttaccgagaggagaagtgtgtgaagcccaggcagatcttgcacttcatg
gaaacaaggttctttaaagttcttctggaagcaattaaaaagaagaccacaaagatggca
tcttttaatgaagtcagcactcggaagacaactcggaaggatttagatgatgaccaagac
aagacactgaacagtctggaagctgtagcagaggaagaagagaacattgttgatgcagaa
gctgatgaaggggatggtgatgctacagaaacaaaacggaggaagaaccaggaagaagag
gttgattatgagagtgaagaagagaatggggaagaaaacgttaatgagaatccagaagat
gaagaggctgaatctgaaaaagaagaagggactcctggtgctgaagaggatcagaacaga
gcagagggtgaagattctcagcatctttcctttgtgtctcagactaaaaaagggaaagat
caattgcttaagtcagcagaggtgcgagtgagcgctgttgtggagagccacccatccata
caggattacacctttgacactgaaaatgagctttggtgtgaggtttccttggcactgcca
ctgaccaaggtgtactttgacctctcctccctgctggcatccctggcgcgcagcacggtg
atccacgaggtgaagggcatcacacgctgcctgctgaatgagagcaccagcaaggaggga
cagaaggaatctgttctccagacagaagggataaacctggcagagctcttcagatactct
gatattttggatttgaacagactttattgcaatgatatccattccatggctaataattat
ggaattgaatcagccctgagggtgattataaaggaaataaaagatgtatttgctgtatat
ggaattgtggtagaccctcgacacctttcacttgtggcagattacatgtgttttgaagga
ttttacaaaccactgaatcgcattggaattcagtccaactcctcccctctgcagcagatg
acgtttgaaaccagctacaaattcttgaaggatgcaacaatgatgggtgcccacgatgag
ctgcgatccccttcagcctgcctggtggttggaaaggttgtcaaaggagggactggcttg
tttgacctcaagcagcccctgacatag |