Serinus canaria (common canary): 103826154
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Entry
103826154 CDS
T05755
Symbol
PCDH7
Name
(RefSeq) LOW QUALITY PROTEIN: protocadherin-7
KO
K16498
protocadherin delta 1
Organism
scan
Serinus canaria (common canary)
Pathway
scan03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
scan00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
103826154 (PCDH7)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
scan01009
]
103826154 (PCDH7)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
scan04515
]
103826154 (PCDH7)
Protein phosphatases and associated proteins [BR:
scan01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
103826154 (PCDH7)
Cell adhesion molecules [BR:
scan04515
]
Cadherins
Protocadherins
103826154 (PCDH7)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Protocadherin
Cadherin_2
Cadherin_CELSR2_9th
Mid2
LYRIC
Motif
Other DBs
NCBI-GeneID:
103826154
NCBI-ProteinID:
XP_009099687
LinkDB
All DBs
Position
Unknown
AA seq
1254 aa
AA seq
DB search
MRKMRTLLRFVHCCCCCFLLLLPPPLWVSLAAAKQLLKYRLAEEGPADIRIGNVASDLGI
VTGSGEVTFSLESGSDYLKIDNMTGELSTTERRIDREKLPQCQMIFDENECFLDFEVSVI
GPSQSWVDLFEGRVIILDINDNTPTFPSPVLTLTVEENRPVGTLYLLPTATDRDFGRNGI
ERYEXXQEPGGDGGRRGGGGGSAAAAPESAPFPGGSKRRQEAEAAARSSVFELQVADTLD
GEKQPQLIVKGALDREQRDSYELSLRVRDGGDPARSSQAILRVLITDVNDNSPRFEKSVY
EADLAENSSPGTPILQLRATDLDVGVNGQIEYVFGAATESVRRLLRLDETSGWLSVLHRI
DREEVNQLRFTVMARDRGQPPKTDKATVVLNIRDENDNVPTIDIRKIGRIPLRDGVASVA
EDVLVDTPIALVQVSDRDQGENGVVTCTVVGDVPFQLKPASEGEGEPQNKRKYFLHTSAP
LDYEAVRDYNVVIVAVDSGSPSLSSNNSLLVRVGDTNDNPPMFSQAVLEVSFPENNLPGE
RVATVVATDADSGKNAEITYSLEASPLSSEAPGNIFSIDPDSGDVSVQAVLDREQRDTYE
FQVTARDKGVPSLQGSTTVVVRVSDRNDNEPRFMQDVFTFYVKENLQPNSPVGMVTVMDF
DKGRNAELSLSIQPGDHEQAAGIFSIENDTGTIFSTVSFDREQQTSYTFKVKAVDGGEPP
RSATATVSLFVMDENDNAPTVTFPSNSSYTVLPPSSNMRTVVATVVATDADTGLNADLNY
SIVGGNPFKLFDIDPASGVVSLVGKLAPKHYGLHRLVVQVNDSGQPPQSTTALLHVFVNE
SLSNATVVXXXXXXXHTPLAQDIAGDPSYELSKQRLSIVIGVVAGIMTVILLILVVVMAR
YCRSKGKHGYEAGKKDHEDFFTPQQHDKAKKPKKDKKGKKSKQPLYSSIVTVEASKPNGQ
RYDSVNEKLSDSPGMGRYRSVNGGPGSPDLARHYKSSSPLPTVQLHPQSPTAGKKHQAVQ
DLPPANTFVGAGDNISIGSDHCSEYSCQASSKYSKQPFRRVTFSVVSQPQDPHQGSLQSC
YDSGLEESETPSSKSSSGPRLGALPLPEDNYERTTPDGSVGEAEHMENDSRPLPDVALTG
KCTRECDEYGHSDSCWMPVRTSPERKQKSQPKLSTFMPVDERGSQEKLANGEASLMGDRN
RNLLNKKLTSSYETFSAASFSKNEEGNPEDIPLTQTGEYKPSPVNTLTRREVYL
NT seq
3765 nt
NT seq
+upstream
nt +downstream
nt
atgaggaagatgcggaccctccttcgctttgtgcattgctgctgctgctgcttcttgctc
ctcctgcctccgccgctctgggtcagcctcgcagcggctaagcagctcctgaagtaccgg
ctggccgaggagggacccgccgacatccgcatcggcaacgtggcttccgacctggggatc
gtgacgggctccggagaggtgacattcagcctggagtcgggctccgactatctcaagatc
gataacatgaccggggagctgagcaccacagagcggcgcatcgaccgcgaaaagctgccg
cagtgccagatgatcttcgacgagaacgagtgcttcttggacttcgaggtgtcggtcatc
ggcccctcgcagagctgggtggacctcttcgagggccgggtcatcatcctggacatcaac
gacaacacccccaccttcccttcccccgtcctcacgctcaccgtggaggagaaccggccc
gtggggaccctctacctgctccccaccgccaccgacagggacttcggccgcaacggcatc
gagcgctacgagcngcngcaggagcccggcggggacggcggccggcgcggcggcgggggc
gggtcggccgcggcggccccagagagcgcccccttccccggcggcagcaagcggcggcag
gaggcggaggcggcagcccgcagcagcgtcttcgagctgcaggtggccgacaccctggac
ggggagaagcagccgcagctgatcgtcaagggggcgctggaccgggagcagcgggactcc
tacgagctcagcctccgcgtgcgggacggcggcgacccggcacggtcctcgcaggccatc
ctgagggtgctgatcaccgacgtgaacgacaacagcccccgcttcgagaagagcgtctat
gaggcggacctggcggagaacagcagccctgggaccccgatcctgcagctgcgtgccacc
gacctggacgtgggagtgaacgggcagatcgaatatgtcttcggggcggccactgagtcc
gtcaggcgcctactgcggctggacgagacctcgggctggctcagcgtcttgcaccgcatc
gaccgggaggaggtgaaccagcttcgtttcactgtcatggcccgagaccggggccagccc
cccaagacagacaaggccactgtcgtgctgaacatccgggatgaaaatgacaacgtgccc
acaatcgacatccggaaaatcgggcgcatcccgctacgggatggggtggcaagcgtggcc
gaggatgtgctggtggacacccccattgccttggtgcaggtgtcagacagggaccaaggt
gaaaatggtgtggtgacctgcactgtggtgggcgatgtgcccttccagctcaaaccggcc
agtgagggtgaaggggagccacagaataagcgcaagtatttcctccacacctcggcccct
ctggattatgaagctgtccgtgactacaacgtggtgattgtggctgtggactcaggcagc
cccagcttgtccagcaacaactctttgctggtgcgggtcggggacactaatgacaaccct
cccatgttcagccaggctgtgctggaggtctcctttccagagaacaacttgcctggtgag
agggtggccacagtggttgccacagatgcggacagtggcaagaatgctgagatcacctat
tccttggaggcctcacccctctcctcagaggcaccgggcaacatcttcagcattgaccct
gactctggggatgtgtcagtgcaggcagtgctggaccgtgagcaacgggacacctatgaa
tttcaggtgacagcccgggacaagggggtgccatcgctgcagggctccaccacagtggtg
gtgcgagtgtcagaccgcaacgacaatgagccacgcttcatgcaggatgtgttcaccttc
tatgtgaaagaaaacctgcagcccaacagccccgtgggcatggtgactgtgatggacttt
gacaagggccgcaacgccgagctcagcctctccattcagcctggagaccatgaacaggca
gctggcatcttctctatcgagaatgacaccggaaccattttctctactgtctcttttgac
cgtgagcagcagaccagctacacatttaaggtgaaggcagtggacgggggtgagccacca
cggtctgccacagccaccgtgtctctctttgtgatggatgagaacgacaatgcacccact
gtcaccttccccagcaacagctcctacactgtgctgccaccctccagcaacatgcgcacc
gtggtggccacagtggtcgccactgatgctgacacaggtctcaacgctgacctcaactac
agcattgttgggggcaatcccttcaaactctttgacatagacccggccagtggtgtggtg
tcactggtgggcaagttggcccccaagcactatggcctgcaccgcctggttgtgcaggtg
aatgacagtgggcagcccccccagtccaccactgccctgctccatgtctttgtcaatgag
agcctgtccaatgccactgtggtgnnnnnnnnnnnnnnnnnnnnncacaccccactggcc
caggacattgctggtgatcccagctatgagctgagcaagcagcggcttagcatagtcatt
ggtgtggtggctggcatcatgaccgtcatccttcttatcctcgtggtggtcatggcccgc
tactgccgatccaagggcaagcatggctacgaggccggaaagaaggaccatgaggatttc
ttcaccccccagcagcacgacaaggccaagaagcccaagaaggacaagaaaggcaagaag
agcaagcagcccctctacagcagcattgttactgttgaggcttccaagcccaatgggcag
cgctacgacagcgtgaacgagaagctctcggacagccctggcatgggccgatatcgctcg
gtcaatggtggcccaggcagccccgacctggccaggcactacaagtcgagctcaccgctg
cccacggtccagctgcacccacagtcccccactgctggcaaaaagcaccaggccgtgcag
gacctgcccccagcaaacaccttcgtgggcgctggcgacaacatctccatcggctcggac
cattgctccgagtacagctgccaggccagcagcaagtacagcaagcagccgtttcgtaga
gtgacgttttctgttgtgagtcagcctcaggacccgcatcaagggtcattgcagagttgc
tatgacagcggtctggaggagtcagaaacaccaagcagtaagagttcatcagggccaaga
ctgggtgcccttccactcccagaggacaactacgaaaggactacgccggatggcagtgtt
ggtgaggcagagcatatggaaaatgattcacggcctctaccagatgtagccctcacaggg
aagtgcacccgagaatgtgatgaatacggccattcagactcctgctggatgccagtccgc
acctctccggagagaaagcagaagagccagccaaaactctccactttcatgcctgtcgat
gagcggggcagtcaggaaaagctggccaatggagaagcctccctcatgggtgaccgcaac
agaaacctccttaacaaaaagttgacctcatcctatgagaccttcagcgcagctagtttc
agcaaaaatgaagaaggcaacccagaggatatcccccttacacagacaggggaatacaag
ccatctcctgtcaatactctaactagaagagaagtttacctgtag
DBGET
integrated database retrieval system
