Serinus canaria (common canary): 103826187
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Entry
103826187 CDS
T05755
Symbol
FIP1L1
Name
(RefSeq) pre-mRNA 3'-end-processing factor FIP1
KO
K14405
pre-mRNA 3'-end-processing factor FIP1
Organism
scan
Serinus canaria (common canary)
Pathway
scan03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
scan00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
103826187 (FIP1L1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
scan03019
]
103826187 (FIP1L1)
Messenger RNA biogenesis [BR:
scan03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
103826187 (FIP1L1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Fip1
Motif
Other DBs
NCBI-GeneID:
103826187
NCBI-ProteinID:
XP_030095293
LinkDB
All DBs
Position
Unknown
AA seq
547 aa
AA seq
DB search
MAPSPASGDRQGCSRGDRHAADENEAERPEEEKSSVPPPPGSEEEAAENGVVKTKVAEAE
DDSDSDSDDDEDDVQVTIGDIKTGAPQFSYGAAPVNLNIKAGGRAYGSSGAKVKGLDLDA
PGSINGVPLLEVDLDSFEDKPWRKPGADLSDYFNYGFNEDTWKAYCEKQKRIRMGLEILP
VTSTTNKITAEDKAMELRPSAEILDGRYHLLKVQQGRTGNLEKELAVQSTKPDFTSPPAL
FKSGIPTNRRISGTIDVIGQTITISRVEGRRRANENSNIQVLSERSNPEVDSFTKPPPFF
PPGAPPTHLPPPPFLPPPPTVSTAPPLIPPPGIPITVPPPGFPPPPGGPPPSLIPTIDSG
HSSGYDGRPVRAFSYGSVTFPHPAGSAPSWSSLLDTSKQWDYYARREKDRERERERSRDR
DRDRDRDRDRDRDRTRDRERDRDHSPSSSAFNSDEERYRYRDYAERGYDRHRTSREKEDR
HRDRRHREKEETRHKSSRSNSRRRHDSEEGDSHRRHKHKKSKRSKEGKEASGEPAPEQEN
TEAAPVE
NT seq
1644 nt
NT seq
+upstream
nt +downstream
nt
atggcgccaagtcctgcttctggagataggcaaggatgttctcgaggggatcgccatgct
gccgatgaaaatgaagcagagagaccagaggaagaaaaatctagtgttccacccccacct
ggaagtgaagaggaagctgcagaaaatggcgttgtgaaaacgaaggtggcagaggctgag
gatgacagtgatagtgatagtgatgatgatgaagatgatgttcaagtcaccataggggat
attaagacaggagctccacagtttagttatggagcagcacctgtaaatctcaatattaag
gcaggaggacgagcttatggatcttctggtgcaaaagttaagggactggatctagatgca
ccagggagcattaatggtgtgccacttctggaagtagatttagattcttttgaagataaa
ccttggagaaagccaggggctgatctctcagattattttaactatggcttcaatgaagat
acctggaaagcttactgtgaaaaacaaaagagaatacgaatgggtcttgaaattttgcca
gttacctcaaccacaaataaaattacggctgaagacaaagctatggaactaagaccaagt
gcagagattctcgatggcagataccatcttttaaaggtacagcaaggcagaactggaaat
ctggagaaagagttggcagtgcagtcaaccaaacctgatttcacatctcctcctgcctta
ttcaaatcaggaattccaacaaacaggcggatatctggcacaatagatgtgattggacag
accatcactatcagcagggtggagggacgacggcgtgctaatgagaacagcaacatacag
gttctttcagaacgctctaatcctgaagtagacagttttaccaagccacctccatttttc
cctccaggagctccacctactcaccttccaccacctcctttcctcccaccccctccaact
gtcagtactgctccacctctgattcccccaccaggtataccaataacagtgccaccacca
ggttttccaccaccacctggcggtcctccaccttccctcatacccacaatagacagtgga
cattcttctggctatgatggtcgtcctgttcgtgcattttcatatggcagtgtcaccttt
ccacaccctgcaggttctgcaccctcatggtctagtcttctggacaccagcaaacagtgg
gattactatgcacgaagagagaaggatagggaacgtgagagagagagatcccgagatcgg
gatcgcgaccgggaccgggaccgagacagagatcgagaccgtaccagagacagggaaagg
gaccgagatcacagtccgtcttcgagtgcgttcaacagtgatgaagaacgctacagatac
agagactacgcagaaaggggctatgaccgccataggacaagcagagagaaagaagacaga
cacagagacaggaggcacagagagaaagaagagactcgacacaagtcatctcgaagtaac
agcagacgtcgtcacgacagtgaagaaggggatagccacagaaggcacaaacacaagaag
tccaaaagaagcaaagaaggaaaagaagccagtggtgaacctgctcctgaacaggaaaac
actgaagctgcccctgtggaatag
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