Entry |
|
Symbol |
LRBA
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Name |
(RefSeq) lipopolysaccharide-responsive and beige-like anchor protein isoform X1
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KO |
K24181 | lipopolysaccharide-responsive and beige-like anchor protein |
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Organism |
scan Serinus canaria (common canary)
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Brite |
KEGG Orthology (KO) [BR:scan00001]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:scan04131]
103826291 (LRBA)
Membrane trafficking [BR:scan04131]
Endosome - Lysosome transport
Others
Others
103826291 (LRBA)
Endosome - Golgi transport
103826291 (LRBA)
Autophagy
Autophagosome formation proteins
Atg8 conjugation proteins
103826291 (LRBA)
|
SSDB |
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Motif |
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Other DBs |
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LinkDB |
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Position |
Unknown
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AA seq |
2881 aa
MASEGKQVVQPTGDDGGGGAGKEGNAAEGGSVLQPLNPGVPIRGIKMKFAVLTGLVEVGE
VSNRDIVDTVFNLLVGGQFDLEMNFIIQEGEGITCMVDLLDKCDITCQAEVWSMFTAILK
KSIRNLQACTEVGLVEQVLRRIDRADNVIADLLVDMLGVLASYNLTVRELKLFFSKLQGE
KGRWPPHAGKLLSVLKHMPQKYGPDAFFNFPGKSAAAIALPPIAKWPYQNGFTFHTWLRM
DPVNNINVDKDKPYLYCFRTNKGLGYSAHFVGGCLIVTSIKSKGKGFQHCVKFDFKPQKW
YMVTIVHIYNRWKNSELRCYVNGELASYGEITWFVNTSDTFDKCFLGSSETADANRVFCG
QMTSVYLFSEALNAAQIFAIYQLGLGYKGTFKFKAESDLFLDEHHKLLLYDGKLSSAIAF
MYNPRATDAQLCLESSPKDNPSIFVHSPHALMLQDVKAVLTHSIQSALHSIGGVQVLFPL
FAQLDYRQYSSDHIDTTVCSTLLAFIMELLKNSIAMQEQMLSCKGFLVIGHSLEKSSKAH
VTRAVLEICLAFSKYLSNLHNGVPLLKQLCDYVLLNPAIWIHIPAQVQLTLYTYLSTEFI
ATVNIYGAIRRVGTVLLVMHTLKYYYWVVNPQDRSGITPKGIDGPRPTQKEILSLRAFLL
MFIKQLVMKDYGIKEDELQAILNYLLTIHEDDNLMDVLQLLVALMSEHPGSMIPAFDQRN
GLQVVYKLLASQSEGIRVQALKVMGYFLKHLSPKRKAEVMLGHGLFSLLAERLMLQTSLF
TMTTYNVLFEILTEQICTQVIHKQHPDPDSTVKIQNPQILKVIAILIRNSPQCPETLEVR
RAFLSDMIKLFNNSRENRRSLLQCSVWQEWMLSLCCFNPKTSEEQKITEMVYTIFRILLY
HAIKYEWGGWRVWVDTLSITHSKVTFEMHKESLSQMYKEYQEKGGEGSGVRSSTPIRTIS
GISKEAETKGKQRSLELKESAAAPSCITDGDIECKTEEKEKENSSDGGQQTHSVSNHQVE
LEGEDMGTTEDLKAVPCMEFSPEPETVKSSVSEISPGIAEAVEDSSKADELVEETVAVTA
ASLAMQTPVEGGTPTSLEGLEKSAVEVEDEDDFVDLKDESSLPLPSEELAERNKECGSNA
SEVTKQEEATEKQPETGLLKSEGTEDVGEKKQELTLPETVSSAVPEVVTQLESVGKKKLK
EGNVVTSETKTTVENTNAHMAEPAGASDKRIAKLDVSSVASDTERLELKANTCLEAPLPP
RSMPERYFLMDALQSAPFFLKGGKPLSTTTYSPPLPSRQQVSSGQELAAPSDGQRRDTRS
AVFRIPEFKWSLMHQRLLTDLLFSIETDIQMWRSHSTKTVMDFVNSSDNVVFVHNTIHLI
SQMMDNMIMASGGILPLLSAATSATHELENIEPTQGLSVEASLTFLQRLINLVDVLIFAS
SLGFTEIESEKNMSSGGILRQCLRLVCAVAVRNCLECQQHAQMKPIGDAGKNQKAVQGFI
GSGKSAAKSPVDIVTGGISPIRDHDRLLQDMDINRLRAVVFRDIEDSKQAQFLALAVVYF
ISVLMVSKYRDILEPQNERRPPNQSQSLKESENENETPAAVVEKPSAALGASASTEDSEK
TASMQRRDSGLGEEATPAQTSSSSGAAEAGPLSVSAGPDAVSEVLCTLSLEVNKSQESGS
ETGTEEIKSVASVPAAKNVNVKDILRSLVSTPADGTAVDAALLPPTFLGVLGDGAAEQPV
QFHSFDRSVVVPTKKSSISSSTAAIGAPTNAVSVVSSLDSAQAPDLSGESPGRGSSNSKL
PSVPAVSSVPEDSASSMSITDRLEHALEKAAPLLREIFVDFAPFLSRTLLGSHGQELLIE
GTSLVCMKSSSSVVELVMLLCSQEWQNSIQKNAGLAFIELVNEGRLLSQTMKEHLVRVAN
EAEFILSRQRAEDINRHAEFESLCAQYSADKREEEKMCHHLITAAKYRDQVTATQLIQKI
INILTDKHGAWGSSAPSRPREFWRLDYWEDDLRRRRRFVRNPLGSTHPEATLRAAGEHAP
DEDMLVKGKQSIKSQILGNQNSESEILLEGDDDIMSFMEEREVENLTGPVSLSTPAQLVA
PSVVVKGTLSITLSELYFEVDEEDPSFKKIDPKILAYTEGLHGKWLFSEIRSIFSRRYLL
QNTALEIFMANRVGVMFNFPDQATVKKVVNCLPRVGIGTIFGLPQTRRISLASPRQIFKA
SNMTQRWQHREISNFEYLMFLNTIAGRTYNDLNQYPVFPWVITNYESEELDLTLPSNFRD
LSKPIGALNPKRAAFFAERYESWEDDEVPKFHYGTHYSTASFALTWLLRIEPFTTLFLNL
QGGKFDHADRTFSSISRAWRNSQRDTSDIKELIPEFYYLPEIFVNSNNYNLGVMDDGTVV
SDVELPPWAKTPEEFVRINRLALESEFVSCQLHQWIDLIFGYKQQGPEAVRSLNVFYYLT
YEGAVNLSSITDSVLREAVEAQIRSFGQTPSQLLIEPHPPRSSAMQVSPLMFTEQAQQDV
IMVLKFPSNSPVTHVAANTQPGLATPAVITVTANRLFAVNKWHSLPAHQGAVQDQPYQLP
VEIDPLIASNTGMHRRQITDLLDQSIQVHSQCFVITSDNRYILVCGFWDKSFRVYSTDSG
KLMQVVFGHWDVVTCLARSESYIGGNCYILSGSRDATLLLWYWNGKTNIIGDNPRGDFAT
PRAVLTGHDYEITCAAICAELGLVISGSKEGPCLIHSMNGDLLRTLEGPERLQGPESCLR
PKLIQASREGHCVIYYENGLFCVFSVNGRLQATMETDDKIRAIQLSRDGQYLLTGGDNGV
VMVWQVWDLKRLFAYPGCDAGIRSMALSYDQRCIMTGMASGSIVVFYNDFNRWHHEYQTR
Y |
NT seq |
8646 nt +upstreamnt +downstreamnt
atggcgagtgaaggcaaacaagttgttcagccaacaggtgatgatggaggaggaggagcg
ggaaaagaaggaaatgctgctgaagggggaagtgtgctgcagcctttgaatccaggagtc
cccatccgaggcattaagatgaaatttgctgtactgacaggactggtggaagttggtgaa
gtgtccaacagagatatagtcgacactgtgtttaacctgctcgttgggggccagtttgac
ttggaaatgaactttatcatccaagaaggagagggcatcacctgcatggtggacttactg
gataagtgtgacatcacctgccaggctgaggtttggagcatgttcacagcaatcctgaag
aaaagcatacggaacctccaggcctgtacggaagtggggctcgtggaacaagtgctcagg
aggatcgacagagctgacaacgtgattgcagatctcttagtggacatgcttggtgtgttg
gctagctataacctgacagttcgagagctgaagttattcttcagcaagctgcaaggagaa
aaagggagatggccaccacatgctgggaagttactgtctgtgttgaaacacatgcctcag
aagtatggacctgatgccttcttcaactttccaggaaaaagtgctgcagctattgcctta
cctcctatagccaagtggccataccagaatggatttactttccacacttggctaagaatg
gatcctgtaaataatattaatgtggataaggataagccctatttatattgttttcgaaca
aacaaaggacttggttattctgctcactttgttggaggctgcttgattgtaacgtccata
aaatcaaagggaaaaggtttccagcactgtgtaaaatttgatttcaagccacaaaagtgg
tacatggtgactatagtgcacatctataaccgctggaagaacagcgaactccggtgttac
gtgaacggggaactggcatcttatggggaaataacgtggtttgtcaacaccagtgatacg
tttgacaagtgtttcctgggttcttcagaaacagcagatgccaatcgagtgttttgcggg
cagatgacatctgtttacctttttagtgaggctctcaatgctgctcagatctttgccatt
tatcagcttggcctgggatataagggaacgttcaagttcaaggcagaaagtgatctcttc
cttgatgaacatcacaaattgttgctatatgatggcaaactctccagtgctattgctttt
atgtacaatccaagggctacagatgcacaactgtgtcttgagtcatcccctaaggataac
ccttctatttttgttcattcaccacatgccctcatgctgcaggatgtgaaagcagtcttg
acgcactccatccaaagcgccctgcactccattggaggagtgcaggtgcttttccctctc
tttgcacagttggactataggcaatattcctcagaccacattgacacaactgtttgttct
actttactggcattcatcatggagttgttgaagaactctattgctatgcaagaacagatg
ctttcctgtaaaggcttccttgtgataggacacagcctagaaaagtcttccaaagctcac
gttaccagagctgtgctagaaatttgccttgccttctcaaaatacctgagcaatttacac
aatggggtacccctgctgaagcagctgtgtgattatgttctcctgaatcctgcaatatgg
attcatatcccagcacaggttcagctgaccctgtacacttacctgtctaccgagttcatt
gccactgttaacatttatggagcaatccggcgggttgggacagttcttttggtcatgcac
accctcaagtattattactgggtggtgaaccctcaggatcgcagtgggataactcccaag
ggcatagatggtccacggcctactcagaaggagattttatccctgcgagcatttttgttg
atgttcattaaacagctagtcatgaaggactatgggataaaagaagatgaattgcaggct
atcctcaattacctgcttacaatacatgaggatgacaatctaatggatgtcttgcagttg
ctggttgctctgatgtcagagcatcctggttctatgatccctgcatttgatcagaggaat
ggattacaggttgtctacaagcttttagcatcacaaagtgaaggcatcagagtgcaagct
ctgaaagtgatgggatatttcttaaagcatctttctccaaagagaaaagctgaagtcatg
cttggacatgggttgttctctttgttggctgaaaggctgatgcttcagacaagcttattc
accatgaccacatacaatgtcctgtttgagattctgactgaacaaatttgcactcaagta
atacataaacaacatcctgacccagattcaacggtgaagatacaaaatcctcagattttg
aaggttattgcaatcctgatccgtaattctccacagtgtccagaaactttggaggtccgg
cgagcctttctctcagatatgattaaactgtttaataacagcagagaaaacaggaggagt
ttgttgcagtgctctgtctggcaggagtggatgctttccctttgttgttttaatccaaag
acttctgaggagcagaagataactgagatggtgtacaccatatttcggattttgctctac
catgcaataaaatatgagtggggtggctggcgtgtgtgggtggatacactgtcaatcaca
cattcaaaggtaacttttgaaatgcacaaagagagtctttcccaaatgtacaaggagtac
caagagaaaggaggtgaagggagtggagtacgttcttctactccaattagaacaatctct
gggattagcaaagaagctgaaaccaagggaaaacaacgttctttggagttaaaagaaagt
gctgctgctccttcttgcattactgatggtgatatagagtgcaaaactgaagaaaaagag
aaagaaaactcatcagatggtggccaacaaactcattcagtatctaatcatcaggtagaa
ttagagggggaggatatgggtactacagaggatttaaaagcagtgccttgtatggaattt
tctccagaaccagaaacagtaaagtccagtgtctcagaaatcagtcctggaatagctgaa
gcagttgaagattctagcaaagctgatgagcttgttgaagaaacagttgctgtcactgct
gcttctttagccatgcaaactcctgtggaaggaggaactcccacaagtctagaaggactg
gaaaaatcagcagtagaggtggaagatgaagatgactttgttgatttgaaagatgaaagt
agtttgcctttgccttcagaagagcttgcagaaaggaacaaggaatgtggctctaatgca
agtgaagtgacaaagcaggaagaagcaacagagaagcaacctgaaactgggcttttaaag
tctgagggtactgaagatgtgggtgagaagaaacaagaactgactttgccagagacggtg
agttctgcagttccagaagtagtaactcagctggagtcagtaggaaaaaagaagctgaag
gaaggaaatgtagttaccagtgaaaccaaaacaactgtggaaaacacaaatgcacacatg
gcagagcctgctggagcctctgataaaagaattgccaagcttgatgtttccagtgttgca
tcagatacagaaagactggagttgaaagctaacacatgtcttgaagcacctctgcccccc
agatccatgcctgagagatacttcctaatggatgctcttcaatctgcaccattcttcctt
aaaggaggaaaaccactgtctacaacaacatattctccacccctgccttcaaggcagcag
gtttcctcaggacaggagctggctgctccatcggatgggcagaggagggatacgaggtca
gctgtgttccgtattcccgagttcaagtggtcactgatgcaccagcgcctgctcacagac
ctgctcttctccatagaaacagatattcagatgtggagaagccattctacaaaaactgtg
atggactttgtgaatagcagtgacaatgtagtgtttgttcacaacacgatccacctcatc
tctcaaatgatggacaacatgatcatggcctctggtggtatcttgccattgctttctgct
gccacatctgctactcatgaattggagaatattgagccaactcaaggactttcagtagaa
gcatctttaacatttctccagagattaatcaaccttgtggatgtgctgatttttgcaagc
tctcttggtttcactgaaattgagtctgagaaaaatatgtcatctggaggaattctgcga
caatgtcttcgtctggtttgtgcggtagcagtaagaaattgcttggagtgtcagcagcat
gcacagatgaagcctattggagacgctgggaagaaccaaaaagcagtgcaaggttttata
ggatcaggaaagtctgcagcaaagagtccagtggacattgtgactggtggcatttctcca
atacgggaccatgacagacttctgcaggatatggatataaatcgcctccgagcagtagtg
ttcagagatatagaggatagtaaacaggctcagtttttggctttggctgttgtatatttt
atttctgtgctcatggtttcaaaatacagagatatactggaaccccagaatgaaagacga
ccaccaaaccaaagtcagtcactcaaggaatcagaaaatgaaaacgagactcctgctgca
gttgtggaaaagccatctgctgctcttggcgcttcagcctctactgaagattcagaaaaa
acagcatctatgcaaagaagggattctggtcttggggaggaagcaactccagcacaaacc
agcagttcaagtggtgctgctgaagcaggacctctgagtgttagtgcaggcccagatgca
gtcagtgaagtcctgtgcacactctcattagaagtcaataaatctcaggagagtggaagt
gagacaggaactgaagagattaaatctgtggcttctgtgcctgctgcaaaaaatgtcaat
gtgaaggacatcttgagaagcctggtgagcacaccagcggatgggactgcagtggatgct
gctctgctgccaccaaccttccttggagttcttggtgacggagctgctgagcagcctgtg
cagttccattcctttgacaggagtgttgttgtaccaacgaagaaatcaagcatttcctct
tctacagctgctattggtgctcctacaaatgctgtcagtgtggtttcttctttagattca
gcccaagctccagatttgtcaggagaatctcctggaaggggatcatctaattcaaaatta
ccatctgttcctgcagtttcttcagtgcctgaggattctgcctccagtatgagtattaca
gacaggcttgagcatgctttggaaaaagctgccccactgctgagagagatttttgtggat
tttgctccctttctttctcggactcttttgggcagccatgggcaggagttgctgatagaa
ggtacaagtcttgtgtgcatgaaatctagcagttcagttgtggagttggtgatgctcctt
tgctctcaggagtggcaaaactctatacagaagaatgctggcctggcctttattgagctt
gtcaatgaagggaggttgctgagtcaaaccatgaaggagcatctggtacgagtggctaat
gaagcagaatttatcctgagcagacagagggcagaggatattaatcgccatgctgaattt
gagtcactgtgtgcccagtactctgcagacaaacgggaagaagaaaaaatgtgtcatcat
ttgatcacggcagccaagtaccgggaccaggtgactgcaacacaactaatacagaaaatt
atcaacatcctgacagacaagcatggagcctggggaagctctgcaccaagtcgtcctcgt
gagttctggcgcctcgactactgggaagatgacttgcggcgccggcgacgatttgtgcgt
aaccccctcggatcgacacatcctgaagcgacactcagggcagccggagagcatgctccc
gatgaggatatgcttgtcaaaggaaagcagtccatcaagagtcaaattttaggaaaccag
aactcagaaagcgagattctcttggaaggtgatgatgatatcatgtcattcatggaggaa
agagaagtggagaacttgacaggtccagtgtccctcagcacaccagctcagcttgtggca
ccctccgtagtagtgaaaggcaccctttccatcactctttctgagctctactttgaggtg
gatgaagaagatcctagttttaagaaaattgacccaaagattctggcatatacagaagga
ctccatggaaaatggctcttctcagagattcgatctatcttttcccgacgttacctcttg
caaaatacagcactggagatattcatggcaaacagagtgggtgtcatgttcaacttccct
gaccaagcaacagtaaagaaagtggttaactgtctgcctcgggttggtattggtaccatc
tttggattgccccagaccagacgcatttctttggctagtccccgacagattttcaaagct
tccaacatgacccagcgatggcagcaccgagaaatttccaactttgaatatttgatgttt
ctaaacactatagcaggtcgaacttacaatgatttgaatcagtaccctgtcttcccttgg
gttatcaccaactatgagtcagaggagttggaccttacacttcctagcaacttcagggat
ttgtcaaagcctattggagctttgaacccaaagagagcagcgttctttgctgagagatat
gagtcatgggaagacgatgaggtcccgaaatttcactacggcactcattattcaacagca
agttttgcactcacatggttgttaaggattgagcccttcacaacacttttcctaaatctg
caaggtgggaagtttgatcatgcagacaggactttttcgtctatttcaagagcgtggcgc
aacagtcagcgtgacacttctgacatcaaggaattgattcctgaattttattacctccca
gagatatttgtcaacagcaacaattacaatctaggagtgatggatgatggaacagtggtg
tctgatgttgaacttccaccatgggccaaaaccccagaagaatttgttcgcatcaacagg
ctggcattagaaagtgagtttgtctcctgccagcttcaccagtggattgatctgattttt
ggctacaaacagcaagggccagaggctgttaggtccctgaatgtattctactatttgact
tatgaaggagctgttaatttaagttcaataacggactctgtactcagagaggctgtggaa
gctcaaatacgaagttttggacagaccccttcccaactgctcatagaaccacatcctccg
agaagttctgccatgcaggtgagccccttgatgttcacagagcaagcccaacaggatgtt
atcatggtcctgaagttcccgtccaactccccagtcacccacgtggcagccaacacccag
cctggcctggccactcctgctgtgatcacagtcactgcaaacaggctctttgctgtgaac
aagtggcacagcctccctgctcatcaaggtgctgtacaagaccagccttaccagctgcca
gtggaaatcgatcctctcatagccagcaatacaggtatgcacaggagacaaatcactgac
cttttagaccaaagcattcaggtgcattcccagtgttttgtcatcacctctgacaatcgt
tacatcttggtctgtggcttctgggacaagagtttccgtgtttactctactgactcaggt
aaactgatgcaagtagtgtttggccactgggatgttgtgacctgtctggctcgttccgag
tcctacattggagggaattgttacatcctctcaggatcccgggatgcaacgttgctgctc
tggtactggaatggcaaaaccaacatcattggtgataacccaagaggtgattttgcaact
cctcgagctgttctgacaggacacgactatgagatcacctgtgctgccatttgtgctgag
cttggtctggtaataagtggttcaaaagaaggaccatgtctcatacattctatgaatgga
gatctactgaggacgttagaaggtcctgaaagattacaaggtcctgaaagctgcctgaga
ccaaaacttattcaagcctccagagaaggccactgtgtcatatattatgaaaatggcctc
ttctgtgtgttcagtgtgaatgggagactgcaggccactatggaaacagatgacaagata
agggccattcagctgagtcgggatggacagtatctgctcacaggtggagacaacggggtt
gtcatggtctggcaggtgtgggacctcaaacggctcttcgcttacccagggtgtgacgct
ggaatccgatccatggccctgtcctatgaccaaaggtgtataatgactggaatggcgtcc
gggagcatcgtggttttttacaatgatttcaatcgctggcaccacgagtaccaaaccagg
tactga |