Serinus canaria (common canary): 103826319
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Entry
103826319 CDS
T05755
Symbol
PRPF39
Name
(RefSeq) pre-mRNA-processing factor 39 isoform X1
KO
K13217
pre-mRNA-processing factor 39
Organism
scan
Serinus canaria (common canary)
Brite
KEGG Orthology (KO) [BR:
scan00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
scan03041
]
103826319 (PRPF39)
Spliceosome [BR:
scan03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
103826319 (PRPF39)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HAT_PRP39_N
HAT_PRP39_C
Suf
TPR_14
HAT_Syf1_CNRKL1_N
HAT_Syf1_CNRKL1_C
TPR_16
Mad3_BUB1_I
Motif
Other DBs
NCBI-GeneID:
103826319
NCBI-ProteinID:
XP_009099863
UniProt:
A0A8C9MER9
LinkDB
All DBs
Position
Unknown
AA seq
666 aa
AA seq
DB search
MENAESTEEEQPTVGNESAEPEAESAAEEQHMDFSTEIMSVTEMEQSPDSSPDLNEDNTQ
ESEIPNIESLQTTDIEADFPPDFDKFWKVVEDNPQDFTGWVYLLQYVEQENHLPAARKAF
DRFFSHYPYCYGYWKKYADLEKRHDNVKQSDEVYRRGLQAIPLSVDLWIHYINFLKETLD
PADPETNSTIRGAYEHAVLAAGTDFRSDRLWEMYINWENDQGNLREVTSIYDRILGIPTQ
LYSHHFQRFKEHIQNNLPRDFLTTEQFVQLRRELAAASGHSSEDGDELPCGTEDITDPAK
LITEIENMRHRIIEIHQEIFNHNEHEVSKRWTFEEAIKRPYFHVKPLEKIQLKNWKEYLE
FEIENGTHERVVVLFERCVISCALYEDFWIKYAKYMENHSIEGVRHVYSRACTIHLPKKP
MVHMLWAAFEEQQGNIDEARRILKTFEECILGLAMIRLRRVSLERRHGNMEEAEQLLEDA
VRNAKSISEASFYAIKLARHLFKVQKNLPKARKVLSEAIELDKENTKLYLNLLEMEYSGD
LKQNEENILSCFDKAIHGALSIKMRITFSQRKVEFLEDFGSDVNKLLDAYDEHQALLKEQ
ETLKRRAENGSEEPDEKKLLTEEAGLASAQLMDGDMQVNQAAYNYNAWYQYNYQNAWNYG
QYYHTT
NT seq
2001 nt
NT seq
+upstream
nt +downstream
nt
atggagaacgcagagagcacagaggaggagcagccaactgtgggcaatgagagcgcggag
cccgaggccgagagcgcggccgaggagcagcacatggacttcagcaccgagatcatgagt
gtcaccgagatggagcagtccccagacagctccccagacctcaacgaggacaacacgcag
gagagcgagattccaaacattgagagcttacagaccacagatatcgaggctgacttccct
ccggattttgacaagttttggaaagtagtagaggacaatccacaggatttcacaggatgg
gtttatctactgcagtacgtagagcaggagaaccacttgccagcagccaggaaagccttt
gacaggtttttctcacactacccctactgctatgggtactggaagaagtacgcggacctg
gagaagcgccacgacaacgtcaagcagtcagacgaggtctatcgccgagggcttcaggca
attcctcttagtgttgatctttggatacattatattaacttcctaaaggagaccttggac
cctgctgatcctgaaactaacagtaccatcaggggagcctatgaacacgcagtgctggct
gctgggacagatttccgttctgacagactctgggaaatgtatataaactgggaaaatgac
cagggaaacctaagggaagttacatccatctatgatcgcatcctgggaatcccaacgcag
ctctacagccatcacttccagaggtttaaagagcacatccagaacaacctgccccgagac
ttcctgaccacagaacagtttgtgcagctgcgccgggagctggcggccgccagcggccac
agcagcgaggacggggacgagctgccctgcggcaccgaggacatcaccgaccccgccaag
ctaatcactgagatagagaacatgaggcacagaatcattgagatccatcaggagatattt
aaccacaacgagcatgaagtcagtaagaggtggacgtttgaggaagcgatcaagaggcct
tactttcatgtaaaacctctggagaaaattcagctgaaaaactggaaagagtacttagag
tttgagatagagaatggcactcacgagcgagtcgtggtcctctttgagagatgtgtcatt
tcatgtgccctctatgaggacttctggatcaagtatgccaaatacatggagaaccacagc
atcgagggcgtgcggcacgtgtacagcagggcctgcaccatccacctgcccaagaagccc
atggtgcacatgctgtgggcagccttcgaggagcagcagggcaatattgatgaagccaga
aggatcctgaagacgtttgaggagtgcatcctggggctggccatgatccgcctgcgcagg
gtgagcctggagcgccggcacggcaacatggaggaggcagagcagctgctggaagatgct
gtcagaaatgccaagtccatcagtgaagcctccttctatgccatcaaactggcccggcac
ctcttcaaagtgcagaaaaacctgccaaaggcaagaaaagtgctgtcagaagccatagaa
ctggacaaagaaaacaccaaactgtacctgaacctgctggagatggaatacagtggtgac
ctcaagcagaacgaggagaacatcctgagctgctttgacaaggccatccatggggccttg
tccatcaaaatgaggatcaccttctcacagagaaaagtggaattcctggaagattttggg
tctgatgtgaacaagctcctggatgcctacgacgagcaccaggcgctgctgaaggagcag
gagacgctgaagcggcgggcagagaacggctcagaggagccggacgagaagaagctgctg
acggaggaggcggggctggcgtcggcgcagctcatggacggggacatgcaggtcaaccag
gccgcctacaactacaacgcctggtaccagtacaactaccagaacgcctggaattacgga
cagtattaccacacaacctga
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