Serinus canaria (common canary): 103826360
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Entry
103826360 CDS
T05755
Symbol
HIF1A
Name
(RefSeq) hypoxia-inducible factor 1-alpha isoform X2
KO
K08268
hypoxia-inducible factor 1 alpha
Organism
scan
Serinus canaria (common canary)
Pathway
scan04137
Mitophagy - animal
scan04140
Autophagy - animal
scan04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
scan00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
103826360 (HIF1A)
04137 Mitophagy - animal
103826360 (HIF1A)
04148 Efferocytosis
103826360 (HIF1A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
scan03000
]
103826360 (HIF1A)
Transcription factors [BR:
scan03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
103826360 (HIF1A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
bHLH_HIF1A
PAS_3
PAS_11
HIF-1a_CTAD
PAS
HIF-1
PAS_9
PAS_4
HLH
Motif
Other DBs
NCBI-GeneID:
103826360
NCBI-ProteinID:
XP_018762664
UniProt:
A0A8C9MRM8
LinkDB
All DBs
Position
Unknown
AA seq
804 aa
AA seq
DB search
MRISSERRKEKSRDAARCRRSKESEVFYELAHQLPLPHTVSAHLDKASIMRLTISYLRMR
KLLDAGELETEAKMEKELNCFYLKALDGFVMVLSEDGDMIYMSENVNKCMGLTQFELTGH
SVFDFTHPCDHEELREMLTHRNGPVKKGKEQNTERSFFLRMKCTLTSRGRTVNIKSATWK
VLHCTGHIRVYDTCGNQTHCGYKKPPMTCLVLICEPIPHPSNIEVPLDSKTFLSRHSLDM
KFSYCDERITELMGYEPEELLGRSIYEYYHALDSDHLTKTHHDMFTKGQVTTGQYRMLAK
QGGYVWVETQATVIYNTKNSQPQCIVCVNYVLSGIVQKDLIFSLGQTECMLKPVESPDMK
MTKIFSKDDLDDTNSLFEKLKQEPDALTVLAPAAGDTIISLDFSSNESDEQQCDEVPLYN
DVMLPSSSEKLQNINMAMSPLPASETTKPLRSNADPALNREVVSKLEPNTEPLELSFTMP
QVQEQPTSPSDASTSQSSPEPSSPNDYCFDVDNDMASEFKLELVEKLFAIDTEAKNPFST
QETDLDLEMLAPYIPMDDDFQLRSFDQLSPLESSSSSSSQSAGSMPLFQQQGQAAAGSPE
EAKLKPAERGDEVKTIVVPSSPVRGAPEPSSAPASPYGGNRSRTASPIRAGKGTVDQGEK
PSPGAPSLLTVTLNERSTALDEELNPKMLALHNAQRKRKMEHDGSLFQAVGIGSLFQQTC
DRGGNASLAWKRVKGCKTNGHSGVEQKTIILLSTDIASKLLGQSMDESGLPQLTSYDCEV
NAPIQGNRNLLQGEELLRALDQVN
NT seq
2415 nt
NT seq
+upstream
nt +downstream
nt
atgaggattagctctgaacgcaggaaagagaagtcgagggatgcagctcggtgcaggagg
agcaaggagtcggaggtgttctatgagctggcccaccagctgcccctgccgcacaccgtc
agcgcgcacctggacaaggcctccatcatgaggctcaccatcagctacctgcgcatgagg
aagctgctggatgctggtgagctggagacagaagccaaaatggagaaggaactgaactgt
ttctacttgaaagctcttgatggctttgtcatggttctgtctgaagatggggacatgatt
tacatgtctgaaaacgtgaacaagtgtatgggactcactcagtttgagttgacggggcac
agtgtatttgatttcactcatccatgtgaccatgaggagctgagagaaatgcttacacac
agaaatggtcctgtgaaaaagggcaaagagcagaacacagagcgcagcttttttctcaga
atgaagtgtacactgactagcaggggaagaacagtgaatataaagtctgctacatggaag
gtgctgcactgcactggccacatccgtgtgtacgacacgtgtgggaaccagactcactgt
gggtacaaaaagcctcccatgacctgcctggtgttgatctgtgaacctattcctcaccca
tcaaacattgaggtccccctggacagtaaaacgttcctcagtcgtcacagtcttgatatg
aaattttcctattgtgatgaaagaattacagagttgatggggtatgagccagaggagctc
ctgggtcgctcaatctatgagtactatcacgcactggattctgatcatctgaccaaaaca
caccatgacatgttcacaaaagggcaggtgacaacaggacagtacagaatgctggccaaa
caaggtggctatgtctgggttgaaactcaagcaactgttatatacaacactaagaattct
cagccacagtgcatagtgtgtgtgaactatgtgttgagtggaattgttcagaaggactta
attttttcccttggacaaactgagtgtatgctgaaaccagtggagtctcctgacatgaaa
atgaccaaaatattcagtaaagatgacctggatgataccaacagcctatttgaaaaactt
aaacaggaaccagatgctttaactgtgctagccccagctgctggagacacaattatctct
ctagatttcagcagtaatgagtctgatgaacaacaatgtgatgaagttcctttgtataac
gatgtaatgctcccctcatccagtgagaaattgcagaatataaatatggcaatgtcccca
ctacctgcctctgaaactacaaagccacttcgtagcaatgctgatcctgcactcaataga
gaagttgtatcaaagctggagccaaacacagagccactcgaactttcttttaccatgcct
caggtgcaagaacaaccaaccagcccttctgatgcaagtaccagccaaagttcacctgag
cccagtagtcccaacgactactgctttgatgtggataatgatatggccagtgaattcaaa
ctggaattagtggagaaactctttgccatagatacagaagcaaaaaatccattctctact
caggaaaccgatttagatttagagatgctggctccttacatcccgatggatgacgacttc
cagctgcgctccttcgatcagctgtccccgctggagagcagcagctcctccagctcgcag
agtgcaggcagcatgcccctgttccagcagcagggccaggcagcagcaggcagccccgag
gaggccaagctgaagccggcagagcgtggggacgaggtgaagacgatcgttgtcccttcc
tcgcccgtgcgcggggcccccgagcccagcagcgcccccgcctcgccctacggggggaac
aggagtcgaactgcctctcccatcagggcagggaaaggaacggtggatcagggggaaaag
ccttctccaggagcacccagcttgctaacagtcactctgaatgaaagatctactgcactg
gatgaagaactaaatccaaagatgctagctttgcataatgctcagagaaaacgaaaaatg
gaacatgatggttcactttttcaggcagttggaattgggtctttattccagcagacatgt
gaccgtggaggaaatgcatcacttgcttggaaacgtgtaaagggatgcaaaacaaatggt
cacagtggagtggagcaaaagacaatcattctactatcaactgacatagcaagtaaactt
ctagggcagtcgatggatgagagtggactcccccaactcacgagttacgactgcgaagta
aacgctcccatacagggcaacagaaacctgctacagggggaagaactgctcagagctctg
gatcaagttaactga
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