Serinus canaria (common canary): 103826446
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Entry
103826446 CDS
T05755
Symbol
DICER1
Name
(RefSeq) endoribonuclease Dicer
KO
K11592
endoribonuclease Dicer [EC:3.1.26.-]
Organism
scan
Serinus canaria (common canary)
Brite
KEGG Orthology (KO) [BR:
scan00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
scan03036
]
103826446 (DICER1)
Chromosome and associated proteins [BR:
scan03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
103826446 (DICER1)
microRNA pathway
RISC loading complex
103826446 (DICER1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Dicer_platform
Dicer_dsRBD
Dicer_PBD
Ribonuclease_3
Ribonucleas_3_3
Dicer_dimer
PAZ
ResIII
DEAD
Helicase_C
Amidoligase_2
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
103826446
NCBI-ProteinID:
XP_030095680
UniProt:
A0A8C9MYY7
LinkDB
All DBs
Position
Unknown
AA seq
1921 aa
AA seq
DB search
MKSPALQSLSMAGLQLMTPASSPMGPFFGLPWQQEAIHDNIYTPRKYQVELLEAALDHNT
IVCLNTGSGKTFIAVLLTKELSYQIRGDFNKNGKRTVFLVNSANQVAQQVSAVRTHSDLK
VGEYSSLEITESWTKEKWSQEFSKHQVLVMTCHVALTVLRNEYLSLSNINLLVFDECHLA
IQDHPYREIMKICEDYPSCPRILGLTASILNGKCDPAELEEKIQKLEKILKSNAETATDL
VVLDRYTSQPCEIVVDCGPYTDKSGLYGRLLKELDEALAFLNDCNISVHSKERDSTLISK
QILSDCRAVLVVLGPWCADKVAGMMVRELQKYIKHEQEELHRKFLLFTDTFLRKIHALCE
EHFSPASLDLKFVTPKVIKLLEILRKYKPYERQQFESVEWYNNRNQDNYVSWSDSEDDDE
DEEIEEKEKPETNFPSPFTNILCGIIFVERRYTAVVLNRLIKEAGKQDPELAYISSNFIT
GHGIGKNQPRNKQMEVEFRKQEEVLRKFRAHETNLLIATSIVEEGVDIPKCNLVVRFDLP
TEYRSYVQSKGRARAPISNYIMLADTDKIKSFEEDLKTYKAIEKILRNKCSKSVDANETE
TEPIVDDDDVFPPYVLRPDENSPRVTINTAIGHINRYCARLPSDPFTHLAPKCKTWELPD
HTFYSTLYLPINSPLRASIVGPPMSCARLAERVVALICCEKLHKIGELDDHLMPVGKETV
KYEEELDLHDEEETSVPGRPGSTKRRQCYPKAIPECLRDSYPKPDQPCYLYVIGMVLTTP
LPDELNFRRRKLYPPEDTTRCFGILTAKPIPQIPHFPVYTRSGEVTISIELKKSGFTLSL
QMLELITRLHQYIFSHILRLEKPALEFKPTEADSAYCVLPLNVVDDSSTLDIDFKFMEDI
EKSEARTGIPSTQYTKEMPFIFKLEDYQDAVIIPRYRNFDQPHRFYVADVYTDLTPLSKF
PSPEYETFAEYYKTKYNLDLTNLNQPLLDVDHTSSRLNLLTPRHLNQKGKALPLSSAEKR
KAKWESLQNKQILVPELCAIHPIPASLWRKAVCLPSILYRLHCLLTAEELRAQTATDAGV
GVKSLPADFRYPNLDFGWKKSIDSKSFISLPNSSVVENENYCKHSTIVVPENAAHQGANR
TSSAENHDQMSVSYRTLLNESPSKLQIDVSVELAAINGVSYNKNLANGNCDLVNRDFCQG
NQLNYCRQDIPVQPTTSYPIQNLYNSENQPKPSNECTLPSNKYLDGNANRSTSDGCPIMA
VTTSTSKAINLSKDRADSEKSPCSGYSSKTLGPNPGLILQALTLSNASDGFNLERLEMLG
DSFLKHAITTYLFCTYPDAHEGRLSYMRSKKVSNCNLYRLGKKKGLPSRMVVSIFDPPVN
WLPPGYIVNQDKSNTDKWEKDEMTKENMLANGKLDDYNDDEENEDLMWRLPKEETDFEDD
FLEYDQEHIKFIDNMLMGSGAFVKKISLSHFSTTDSNYEWKAPKKSSMGNVQCSSDFDDF
DYSSWDAMCYLDPSKAVEEDDFVVGFWNPSEENCGVDAGKQSISYDLHTEQCIADKSIAD
CVEALLGCYLTSCGERAAQLFLCSLGLKVLPVIKKTDWEGTLCATRENCDSEQKNLSPNS
VAASVVNSEPSLCKDLEYGCLKIPPRCMFDHPDAEKTLNHLISGFENFEKKINYSFKNKA
YLLQAFTHASYHYNTITDCYQRLEFLGDAILDYLITKHLYEDPRQHSPGVLTDLRSALVN
NTIFASLAVKYDYHKYFKAVSPELFHVIDDFVQFQMEKNEMQGMDSELRRSEEDEEKEED
IEVPKAMGDIFESLAGAIYMDSGMSLEMVWQVYYPMMRPLIEKFSANVPRSPVRELLEME
PETAKFSPAERTYDGKVRVTVEVVGKGKFKGVGRSYRIAKSAAARRALRSLKANQPQVPN
S
NT seq
5766 nt
NT seq
+upstream
nt +downstream
nt
atgaaaagccctgctttgcaatccctcagcatggcgggactgcagctcatgacccctgct
tcctccccaatgggtccattttttggactaccatggcaacaagaagcaattcatgataac
atttacacgccaagaaaatatcaggttgaactgcttgaagcagctttggatcataataca
atagtctgcttaaacactggctcagggaagacttttattgcagtactactcactaaagag
ctgtcctatcagatcaggggagatttcaacaaaaatggaaagagaactgtgttcttggtg
aactcggcgaatcaagttgctcaacaagtgtcagctgtcaggacacattcagaccttaaa
gtgggagagtattcaagtttggagataactgaatcatggacaaaagagaaatggagtcag
gaattctctaagcatcaggttctggttatgacatgtcatgttgctttgactgttttgaga
aatgagtatttatccctgtcaaatattaatcttctggtgtttgatgagtgccatcttgca
atccaggatcatccataccgtgagattatgaagatctgtgaggattatccatcatgtcct
cgaattttgggattaacagcttccattttaaatgggaaatgtgatcctgctgagttagag
gagaagatccagaaactggagaaaattttgaagagcaatgctgaaactgcaacagatttg
gtggtcttggacagatatacttctcagccatgtgagattgttgtagactgtggaccatat
actgacaaaagtgggttgtatggaagattattaaaggaattggatgaagcacttgctttt
ctgaatgactgcaacatatctgtacattcaaaagaacgagattctaccttaatttctaag
cagatattgtcagactgtcgagctgtgttggttgttctgggaccgtggtgtgcagataag
gtagctgggatgatggtgagagagctgcagaagtatatcaaacatgaacaagaggagctg
cacaggaaatttttattgtttacagacactttcctaaggaaaatacatgcactctgtgaa
gagcacttctcgcctgcctcacttgacctgaaatttgtgaccccaaaagtaataaagctg
cttgaaatcttgcgcaaatacaaaccatatgaacggcagcagtttgaaagtgttgaatgg
tataacaataggaatcaggataattacgtatcttggagtgattctgaagatgatgatgag
gatgaagaaattgaggagaaagagaagccagagactaatttcccatctccctttactaat
attttatgtggaattatttttgtggaaagaagatacacagcagttgttctaaataggttg
ataaaagaagctggcaagcaagatccagaactggcttacatcagtagcaattttataact
ggacatggcattggcaagaaccagcctcgtaacaagcagatggaagtagaatttagaaaa
caggaagaggttcttagaaaatttcgagcccatgagaccaacctacttattgctactagt
attgtagaagagggtgttgacataccaaaatgcaacttggtggtgcgttttgatttgccc
acagagtaccgttcctatgtgcagtcaaaaggaagagctagagcaccaatttccaattac
attatgttagcagatacagataaaatcaaaagttttgaagaagatcttaagacatacaaa
gcaattgagaagatcctccgaaacaaatgctcaaaatctgttgatgccaatgaaactgaa
actgaacccattgttgatgatgatgatgtctttccaccctatgtattgaggccagatgag
aacagtccaagggttactattaacactgctattggacacataaataggtactgcgctaga
ttaccgagtgatccatttacacacctggctcccaagtgtaagacctgggaactacctgac
catacgttttactctactctctacctgccaatcaactcacctcttcgagcttctattgtt
ggccctccaatgagttgtgcaagactggctgagagagttgtcgctcttatttgctgtgaa
aaactgcacaaaattggtgaactggatgatcatttgatgccagttggtaaagaaacggtt
aaatatgaggaggaactcgatttacatgatgaagaagaaaccagtgttccaggaaggcca
ggctctacaaaacgaagacagtgctatcctaaagctattccagagtgtttgagggatagt
tatcccaaacctgaccagccctgttacttgtatgtaataggaatggtgttgacaactcct
ctacctgatgagctcaacttcaggagacgaaagctatatcctcctgaggatactacaaga
tgttttggcatattgacagccaaacctatacctcaaattcctcactttcctgtgtatact
cgctctggagaggttacaatatccattgagctaaagaaatctggttttactctgtctctg
caaatgcttgagctgataacacgactccaccagtacattttttcacatattcttcgtctt
gagaaacctgcactagagttcaaacctacagaagctgattcagcctattgtgttctacct
ctaaatgttgttgatgactccagcactttggacattgactttaagtttatggaagacatt
gagaaatctgaggcacgtacaggcattcccagtacacaatatacaaaagaaatgcctttt
attttcaagttagaagattaccaggatgcagttatcattccacgataccgaaactttgat
cagcctcaccgattctacgtagctgatgtatacactgatcttactccactcagtaaattc
ccttcccctgaatatgaaacttttgctgaatattataaaacaaagtataatcttgacctt
accaatcttaaccagccactgctggatgtggaccacacatcttcaagacttaatcttttg
actcctcgccatttgaatcagaagggaaaagcacttccactaagcagtgctgagaagagg
aaagcaaagtgggaaagtttgcagaataaacagatactggttcctgagctctgtgctata
catcctattccagcatcattgtggagaaaagcagtttgcctccccagcatcctttaccgc
ctgcactgccttctgacagcagaggaactaagagctcaaacagccactgatgctggtgta
ggggttaaatcacttcctgcagatttcagatatcctaacctggactttggatggaaaaag
tctattgacagcaagtccttcatctctcttcctaactcctctgtagtagagaatgaaaat
tactgtaagcacagcacaattgtagtccctgaaaatgctgcacatcaaggtgctaataga
acctcttctgcagaaaaccatgaccaaatgtctgtgagttacagaacattgctcaatgag
tcacccagtaaactccaaattgatgtctcggtagaacttgcagcaattaatggtgtttct
tataataaaaatcttgccaatggcaattgtgatttagttaacagagacttttgccaagga
aatcagctgaattactgcaggcaggacatacctgtacaaccaactacctcatatcccatt
cagaatttatacaacagtgagaaccagcccaagcccagcaatgaatgtactctaccgagt
aataaataccttgatggaaatgctaacagatctacctcagatggatgccccataatggca
gtgaccaccagtacttcaaaagctattaatctttcaaaagacagagcagattctgaaaag
agcccttgcagtgggtactcctcaaaaactcttggtcctaatcctggtctcattcttcaa
gctttgactctttcaaatgctagtgatgggtttaacctggagcggctagagatgcttggt
gattcatttttaaagcatgccatcactacatacttgttttgcacttaccctgatgctcac
gagggacgactgtcatacatgagaagcaaaaaagtcagcaactgtaacttgtatcgcctt
ggaaaaaagaaaggactgccaagtcgcatggtggtgtcgatttttgatcccccagtcaat
tggcttcctcctggttacatagtaaatcaggacaagagcaacactgacaagtgggagaaa
gatgaaatgacaaaagaaaacatgttggctaatggtaaacttgatgattataatgatgat
gaagagaatgaagacctaatgtggaggttgcccaaggaagaaacagactttgaagatgat
tttctggagtatgatcaggagcatatcaaattcattgataatatgttaatgggatcaggg
gcttttgtgaagaaaatttcactctcacacttttcaaccactgattcaaactatgaatgg
aaagcacccaagaagtcatccatgggtaacgttcagtgttcatcagattttgatgatttt
gactatagctcttgggatgctatgtgctatctggatcctagcaaggctgttgaagaggat
gattttgtagtgggcttctggaatccatcagaagaaaactgtggtgttgatgcaggaaag
cagtcgatctcctatgacttgcatacagagcagtgtattgctgacaagagcattgcagac
tgtgtggaagccctgttgggctgctatctgaccagctgtggtgaaagagctgctcagctc
ttcctgtgttcattggggctgaaggtgctccctgtaattaaaaagactgattgggaaggc
actctgtgtgctaccagagagaactgtgacagtgagcagaaaaatctttcaccaaattct
gttgctgcttctgtagtaaattcagagccttctctgtgtaaagacctggagtatggctgt
ttgaagattccaccaaggtgtatgtttgatcacccagatgctgaaaaaaccctgaatcac
cttatttctggttttgaaaactttgagaagaaaataaattacagttttaagaacaaggct
tatcttcttcaggcatttactcatgcctcttaccattataataccattactgattgttac
cagcgcttagaattcctgggagatgcaattttggactacctcataaccaagcacctttat
gaagacccacggcaacactctccaggagttcttactgacctacgatctgctctagtcaat
aataccatttttgcatcattagctgtaaagtatgactaccacaagtacttcaaagctgtc
tctcctgaactgtttcatgttattgatgactttgtgcagtttcaaatggaaaagaatgaa
atgcaaggaatggattctgagctcagaagatctgaagaagatgaagaaaaagaggaagac
attgaagtaccaaaggccatgggagatatatttgagtcccttgctggtgccatttatatg
gatagtggaatgtctttggaaatggtttggcaagtgtactatccaatgatgaggccacta
atagaaaaattttctgctaatgtgccccgttccccagtgcgagagctgctggaaatggag
ccagagacagccaaatttagtcctgcagaaagaacttacgatgggaaggtcagagttaca
gtggaagttgtaggaaagggcaagtttaaaggtgttggcagaagctacaggattgccaaa
tctgcagctgcgagaagagcactacgaagcctcaaagcaaatcaacctcaggtcccaaac
agctga
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integrated database retrieval system
