Serinus canaria (common canary): 103826468
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Entry
103826468 CDS
T05755
Symbol
CPSF2
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 2
KO
K14402
cleavage and polyadenylation specificity factor subunit 2
Organism
scan
Serinus canaria (common canary)
Pathway
scan03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
scan00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
103826468 (CPSF2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
scan03019
]
103826468 (CPSF2)
Messenger RNA biogenesis [BR:
scan03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
103826468 (CPSF2)
U7-dependent histone pre-mRNA processing factors
103826468 (CPSF2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Lactamase_B_6
CPSF100_C
Beta-Casp
RMMBL
Lactamase_B
Lactamase_B_2
Beta_lactamase3
Motif
Other DBs
NCBI-GeneID:
103826468
NCBI-ProteinID:
XP_009100047
UniProt:
A0A8C9MY35
LinkDB
All DBs
Position
Unknown
AA seq
782 aa
AA seq
DB search
MTSIIKLTTLSGVQEESALCYLLQVDEFRFLLDCGWDENFSMDIIDSLRKHVHQVDAVLL
SHPDPLHLGALPYAVGKMGLNCAIYATIPVYKMGQMFMYDLYQSRHNTEDFTLFTLDDVD
AAFDKIQQLKFSQIVNLKGKGHGLSITPLPAGHMIGGTIWKIVKDGEEEIVYAVDFNHKR
EIHLNGCSLEMLSRPSLLITDSFNATYVQPRRKQRDEQLLTNVLETLRGDGNVLIAVDTA
GRVLELAQLLDQIWRTKDAGLGVYSLALLNNVSYNVVEFSKSQVEWMSDKLMRCFEDKRN
NPFQFRHLSLCHSLSDLARVPSPKVVLASQPDLECGFSRDLFIQWCQDSKNSIILTYRTT
PGTLARFLIDNPSEKVIDIELRKRVKLEGKELEEYLEKEKLKKEAAKKLEQSKEADIDSS
DESDAEEDIDQPTLHKTKHDLMMKGEGSRKGSFFKQAKKSYPMFPAPEERIKWDEYGEII
KPEDFLVPELQATEEEKSKLESGLTNGEEPMDQDLSDVPTKCISATESMEIKARVTYIDY
EGRSDGDSIKKIINQMKPRQLVIVHGPPEASQDLAECCRAFGGKDIKVYMPKLHETVDAT
SETHIYQVRLKDSLVSSLQFCKAKDAELAWIDGVLDMRVSKVDTGVILEEGELREDEDLE
MQVDVPSSDSSVIAQQKAMKSLFGDDDKEMCEESEIIPTLEPLPPHEVLGHQSVFMNEPR
LSDFKQVLLREGIQAEFVGGVLVCNNLVAVRRTETGRIGLEGCLCQDFYRIRDLLYEQYA
IV
NT seq
2349 nt
NT seq
+upstream
nt +downstream
nt
atgacatcgattatcaagttgactacactctcgggagtgcaggaggaatctgccctctgc
tatcttttgcaagtagatgagtttcgttttcttttggactgtggctgggatgaaaacttt
tctatggatattattgattccctgaggaagcatgtacaccaggttgatgctgttcttctt
tcccaccctgaccctctacaccttggtgcacttccatatgcagttggaaaaatgggattg
aattgtgccatttatgcaactattcctgtatataaaatgggacagatgtttatgtatgat
ctctaccagtcccgccataatactgaagatttcacactctttacattggatgatgtagat
gcagcctttgataagatacaacagctgaagttttctcagattgtgaacttaaaaggtaaa
ggacatggtttgtcaatcacaccattgccagctggtcacatgataggaggcactatttgg
aagattgtcaaggatggggaggaagaaattgtttatgccgttgatttcaaccacaagagg
gagatccatctgaatggatgttccttggaaatgttgagcaggccttcattgcttattaca
gattcatttaatgctacttatgtacaacctaggaggaagcaaagggatgaacagctgctg
actaatgttttggagacattacgaggtgatggaaatgtattaatagctgtggatacagca
ggcagagttctggaacttgctcagcttcttgaccagatctggagaacaaaagatgcagga
ttgggagtctactctcttgcacttttgaataatgtcagctacaatgtagtggagttctct
aaatcacaggttgaatggatgagtgacaagttgatgaggtgctttgaagacaagagaaac
aacccttttcagttccgccatctctcattatgtcacagtctgtctgatctggctcgagtg
cctagtcctaaagttgttcttgccagtcagcctgacttggagtgtgggttttctagagat
cttttcattcagtggtgccaggattccaaaaactctataattttaacttatcgcactaca
cctggaacattagcacgattcctgatagataatccttctgaaaaagttatagatattgag
ttgagaaaacgtgtcaagttggaaggaaaagaacttgaagaatacctagaaaaggaaaaa
ctaaagaaagaggcagctaagaagttagagcagtctaaagaggcagatattgattccagt
gatgagagtgatgctgaagaggatattgatcagccaactttacataagaccaaacatgat
ttgatgatgaaaggtgaaggtagccggaaaggaagcttcttcaaacaggcaaaaaaatct
tatccaatgtttccagctcctgaagaaagaattaaatgggatgaatatggtgaaattatc
aaacctgaagattttctagttccagagcttcaagcaacagaagaagaaaaaagcaaatta
gagtctggtttgacaaatggagaggagcctatggatcaggatttatcagatgttcctacc
aaatgtatttctgcaacagaatcaatggaaattaaagccagagttacatacattgactat
gaaggacgttcagatggggactcaattaaaaaaattattaaccaaatgaaaccaagacaa
ctggtgattgtccatggaccacctgaggccagtcaggaccttgcagaatgttgcagagct
tttggtggaaaagatattaaagtttacatgcccaaacttcatgaaactgtagatgctaca
agtgaaactcacatttaccaggtcaggttgaaagattctcttgtcagctctcttcagttc
tgtaaagccaaggatgctgagttggcttggatagatggtgttctggacatgagggtttca
aaagtggatactggagttattttggaagagggagaattgagggaagatgaagacttagaa
atgcaagtggatgtgccttcttcagactcaagtgtgattgcacaacagaaggccatgaaa
agcctctttggtgatgatgacaaggagatgtgtgaggagagcgagatcattcctactttg
gaacctctgccacctcatgaggttcttgggcatcagtctgtgtttatgaatgagccaaga
ctgtctgacttcaagcaggttctcttgcgggaaggtatacaagctgaatttgttggagga
gtgcttgtgtgcaacaacctggtggctgtccgcaggactgaaacagggcgtattggattg
gaaggctgcctctgccaggacttctataggataagagaccttttatatgagcaatatgct
attgtctaa
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