KEGG   Serinus canaria (common canary): 103826483
Entry
103826483         CDS       T05755                                 
Symbol
TDP1
Name
(RefSeq) tyrosyl-DNA phosphodiesterase 1 isoform X2
  KO
K10862  tyrosyl-DNA phosphodiesterase 1 [EC:3.1.4.-]
Organism
scan  Serinus canaria (common canary)
Pathway
scan03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:scan00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    103826483 (TDP1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:scan03400]
    103826483 (TDP1)
DNA repair and recombination proteins [BR:scan03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Other BER factors
     103826483 (TDP1)
SSDB
Motif
Pfam: Tyr-DNA_phospho HGL2_C
Other DBs
NCBI-GeneID: 103826483
NCBI-ProteinID: XP_009100068
LinkDB
Position
Unknown
AA seq 607 aa
MLQEGAHGKWTVSSSDESAEENSDSEKPCTSSLSDAACGRTSGPQYPCSEARKAAHKRKA
SPVKFTDKSLSTEAPPAVKQRPSQEGSGWCLSSSDEESEDQQKHVHKETVKEEKHDVSKE
HPLNLCKDDKLSENLKEEEYNLTPSEAQDTWDLVTGGNPFRFFLTKVSGIEQNYNSGALH
IKDILSPLFGTLISSAQFNYCIDVGWLVRQYPQEFRKKPLLIVHGEKRESKAELIAQARP
YENISFCQAKLDIAFGTHHTKMMLLLYEEGLRVVIHTSNLIADDWHQKTQGIWLSPLYPR
LPKGASGTAGESATNFKSDLISYLAAYNSPALKEWIDLIQEHDLSETRVFLLGSTPGRYQ
GSDKEKWGHLRLRKLLKEHAVSIPAQESWPLVGQFSSIGSMGADGSKWLCSEFQESLVAA
GSSVTTFRKCDVPIHLVYPTVNNVRQSLEGYPAGGSLPYSVQTAQKQLWLHSYFHKWSAE
VTGRTHAMPHIKTYMRLSPDFQKIAWFLVTSANLSKAAWGALEKNGSQLMIRSYELGVLF
LPSAFGLDKGYFHVGREKLPERKDSATYFPVPYDLPPEQYGSKDQPWIWNIPYTDAPDTH
GNMWVPS
NT seq 1824 nt   +upstreamnt  +downstreamnt
atgcttcaggagggcgcacacggtaaatggacagtatctagcagtgatgaaagtgccgag
gaaaattcggacagtgaaaaaccatgtacgtcttcactatcggatgctgcatgtggtaga
actagtggaccacagtatccatgctctgaagctaggaaagctgctcacaagagaaaagct
tcccccgtgaagttcactgataaaagtctttctacagaagcacctccagcagtaaaacag
agaccaagccaagaaggctcaggttggtgtctttctagtagtgatgaagagtctgaagat
cagcaaaagcatgtccacaaagaaacagtgaaagaagaaaaacacgatgtgtccaaagag
catcctttgaatctttgcaaagatgacaaactctcagagaatctgaaagaagaggagtat
aatctaacacccagtgaagcccaagatacctgggatttggtgactggaggcaatcctttc
aggttttttctcacaaaagtcagtggaattgaacagaactataattctggagccctgcac
ataaaagatattttgtctcctctttttggaactctcatatcttctgcccagtttaactac
tgtatagatgtgggatggcttgtaagacagtacccgcaggaattcaggaagaagccattg
ctgatagttcacggtgagaagagagaatccaaagctgaactaattgcacaagcacggcct
tatgagaatattagcttttgtcaggctaaactggatattgcttttggaactcaccatacg
aaaatgatgttgttgctgtatgaagaaggtcttcgagttgtgatacatacatccaatctt
attgctgatgattggcaccagaaaactcagggaatatggttaagccctttatatccaagg
ctacctaagggagcatctggtacggctggtgaatctgcaactaattttaaatctgaccta
ataagttacttggcagcttacaattctcctgcgctcaaggaatggatagatctgattcaa
gaacatgatttatcagaaacaagagtgtttctgcttggttctacccctggacgatatcaa
ggcagtgataaagaaaagtggggccatcttaggctcagaaagcttttgaaggagcatgct
gtgtcaataccagcacaggaatcctggcctcttgttggacagttctcaagcatcggttca
atgggagctgatgggtccaagtggctgtgctcagagttccaggagagcctggtggctgca
ggcagcagtgtgacaactttccgtaaatgtgatgtcccaattcatttggtttatcctact
gtgaacaacgtgagacaaagtctagaaggctatcctgctggtggctcacttccgtacagt
gtacagacagcacagaaacagctgtggttgcattcctattttcacaaatggtcagcagaa
gtcacaggtcgaactcatgctatgcctcacattaagacttacatgagactctctcctgat
ttccagaagattgcttggttcttggtaacaagtgccaatctatctaaagcagcctgggga
gctctggagaagaatggcagccaactgatgatccgttcttacgaacttggagttcttttc
ttgccttcagcatttggattggacaaaggttactttcatgtaggaagggaaaaacttcca
gaaaggaaagattcagcaacatattttcctgtaccttatgacctcccaccagagcagtat
ggaagcaaagatcaaccatggatttggaatattccttacactgatgcccctgatacacat
ggaaatatgtgggttccatcataa

DBGET integrated database retrieval system