Serinus canaria (common canary): 103826667
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Entry
103826667 CDS
T05755
Symbol
VPS18
Name
(RefSeq) vacuolar protein sorting-associated protein 18 homolog
KO
K20181
vacuolar protein sorting-associated protein 18
Organism
scan
Serinus canaria (common canary)
Pathway
scan04140
Autophagy - animal
scan04142
Lysosome biogenesis
scan04145
Phagocytosis
scan04148
Efferocytosis
scan05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
scan00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagocytosis
103826667 (VPS18)
04142 Lysosome biogenesis
103826667 (VPS18)
04140 Autophagy - animal
103826667 (VPS18)
04148 Efferocytosis
103826667 (VPS18)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
103826667 (VPS18)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
scan04131
]
103826667 (VPS18)
Membrane trafficking [BR:
scan04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
103826667 (VPS18)
Hops complex
103826667 (VPS18)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pep3_Vps18
VPS18_solenoid_2nd
VPS18_solenoid_1st
VPS18_RING_C
Clathrin
zf-C3HC4_2
zf-RING_Vps41
aq_1631
zf-RING_16
zf-RING_5
Lact-deh-memb
zf-RING_11
zf-ANAPC11
zf-RING_UBOX
zf-RING_2
zf_RING_Vps8
Nup54_57_C
STX17_N
DUF5600
zf-rbx1
RBSN_mid
DUF1664
Motif
Other DBs
NCBI-GeneID:
103826667
NCBI-ProteinID:
XP_009100319
UniProt:
A0A8C9MG61
LinkDB
All DBs
Position
Unknown
AA seq
974 aa
AA seq
DB search
MASILDEYEDSLHRSVSVPQSRGTVGIPHSGYVNARLEKETPIFNKQRIDFAPPEKINSL
VVSSNQLCMSLGKDTLLRIDLGKPDEPNQVELGRKDEAKVYKMFLDHTGSHLLIALNTSE
CLYLNRSVQKVRALSRWKGHLIESVGWNKFLGSETNTGPILVGTSQGQIYEAEISVSEGS
LFSTNPDQYFRQVYTLEEESGPAPVCCLEIERGLEGKFFIIATTRKRLFQFVGKVPEGTE
QQGFSSIFAVHADHLPSFREFPANLGFSEIAFYTPKLRSNPRSFAWMMGNGVLYGTLDYS
RPDSILSDERVWVYPPDIDITVNKPISIVLTQFHFLLLLPDRVKAVCTLNGQVVFQDLFL
EKFGLLTRMIKDPTVQQIWIHTEKVVFRYHVQRESRDVWKMYMNMNKFDLAKEYCKDRPE
CLDIVLAKEAEHCFQNKRYLDSAKCYAMTQNYFEEIALKFIEAKQEEALMEFLIKKLSNL
KSSEKTQTTLLTTWLTELYLNWLGILQGDPSQRNLYLDTREKFRSFLSSPKNKDCLFNNR
ASIYELLASHGDTEHMVYFAVIMQDYERVVAHHCQHDEYDEALNVLSRHRDEKLFYKFSP
VLIQHIPKKVVDAWISMGSRLDARNLIPALVNYSQSASTQQINEAIRYMEFCVYQLEETQ
QAIHNYLLSLYALCRPDSLLSYLEQAGTNPNRIHYDLKYALRLCAEHGHHRACVHIYKVM
ELYEEAVDLALQVDVDLAKSCADLPEDDEELRKKLWLKIARHVVQEEKDVKKAMACLSSC
ALLKIEDVLPFFPDFVTIDHFKEAICNSLEDYNKHIEELKREMEEATQSAKRIREDIQEM
RNKYGSVEPQEKCAACDFPLLNRPFYLFLCGHMFHYDCLLQAVFPNLPAYKQVKLEDLQK
KLAATSQPSKSHHRPKDADTVSLGKGQQSREQIKADIDDIVAAECVYCGELMIRSIDKPF
IDPQKYEEEMQSWL
NT seq
2925 nt
NT seq
+upstream
nt +downstream
nt
atggcctccatcctggacgagtacgaggactccctgcaccgctccgtgtccgtgccgcag
agccgcggcaccgtgggcatcccgcactccggatatgtcaatgcacgactggagaaggaa
acgccaatatttaacaagcagaggattgattttgctcctcctgagaaaattaacagctta
gttgtctcctctaaccagctctgtatgagccttgggaaagacacccttctcaggattgat
cttgggaagccagatgaacctaatcaggtagagctgggacgcaaagatgaagccaaagtc
tacaagatgtttttggaccacacaggctctcatctcctgattgctctgaacaccagtgaa
tgcctttacctgaacagaagtgttcagaaagtgcgggcactctcccgctggaaaggacac
ttgattgaaagtgtgggctggaacaaatttcttggttcagaaaccaacacagggcctatc
ctggtgggcacatcccaggggcagatctatgaggctgaaatctctgtcagtgaaggaagc
ctcttcagcactaaccctgaccagtacttccgccaggtttacactctggaggaggaatct
ggacctgccccagtctgctgcttggaaattgaacgagggctagaagggaaattttttatt
atagccaccactaggaagagactctttcagtttgttggcaaagtgcctgaagggacagaa
cagcaaggcttcagctccatatttgctgtgcatgctgaccatctgcccagctttcgggag
tttccagccaacttgggtttcagcgagatagccttttacactccgaaactgcgttccaac
ccgcgctcctttgcctggatgatgggaaacggtgttctatatggtaccttggattatagt
cgacctgattcaattctaagtgacgaacgggtctgggtttatcctcctgatattgatata
actgtgaacaagccaatatccattgtgcttacccagttccactttctcttgctgctgcct
gaccgggtgaaggcagtctgcactctgaacggacaggttgtttttcaggatctgttcctg
gagaagtttggcttgctgacacgcatgattaaagatcccacagtccagcagatatggatt
cacactgagaaagtagtgttccgctaccatgtgcaacgggaatctagagatgtgtggaag
atgtatatgaatatgaacaaatttgatttagcaaaagagtattgtaaggaccgtccagag
tgtcttgacattgtgttggctaaagaggcagagcattgcttccaaaacaagaggtatctg
gacagtgccaaatgttacgcaatgacccagaactactttgaggaaattgctctgaagttc
attgaagccaagcaagaagaggccctgatggagtttctgattaagaagctaagtaaccta
aagtcctcagagaagacacagactactctgctgaccacgtggttgacagagctgtacctg
aactggctgggcatattgcaaggagatccctcacagcgaaatctctatttggatacacgg
gagaagttccgcagtttcctgagcagtcctaaaaacaaagactgtctttttaataatcgg
gcatctatctatgagctgttggcaagccatggcgacacagagcacatggtctactttgca
gtcatcatgcaggattacgagcgtgtagtagctcaccactgccagcatgacgagtacgat
gaggctctaaatgtgctgtccagacacagagatgagaaactcttctacaagttctctcca
gttctcatccagcatattcccaagaaggtggttgatgcttggatttctatgggctctaga
ctggatgccaggaacctcattccagcccttgttaactacagccagagtgccagcacccag
cagatcaatgaagccatcagatatatggagttctgtgtctaccagttggaggaaacccag
caagccattcacaactacttgttgtctctttatgctttgtgtcggccagactcgctgctg
tcatacctggagcaagcaggaaccaacccaaacaggatccactacgacctgaagtatgca
ctacgcctgtgtgcagagcacgggcaccaccgtgcatgtgtccacatctacaaagtgatg
gaattatatgaggaggctgtggatcttgccttacaggtggatgttgatcttgccaagtcc
tgtgcagatcttcctgaagatgatgaggagctccggaagaagctgtggttgaagatcgct
cgccatgttgtccaggaagagaaggatgtcaagaaggcaatggcctgcctgtccagctgt
gctctgctgaagattgaagatgtgctgccattctttccagactttgtcactattgaccat
ttcaaggaggcaatctgtaactccctggaggattacaacaagcacattgaggagctgaaa
agggagatggaggaagctacacagagtgccaagaggatccgagaggacatccaggaaatg
agaaataaatatggctctgtggagcctcaggaaaaatgtgctgcttgtgactttccactt
ctaaaccgccctttttaccttttcctgtgtggtcacatgtttcactatgactgtctcctc
caagcagttttccctaaccttcctgcctataaacaggtaaaacttgaagatcttcagaag
aagctggcagctaccagccagccatccaagagccaccatcgtcccaaggatgcagacacc
gttagcttggggaaggggcagcagagccgggaacagatcaaagctgacattgatgatatt
gtggcagctgagtgtgtgtactgtggtgagctgatgatccggtccattgacaagcctttt
attgatccccagaagtatgaagaggagatgcaaagctggctgtaa
DBGET
integrated database retrieval system
