Serinus canaria (common canary): 103826770
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Entry
103826770 CDS
T05755
Symbol
GTF2H1
Name
(RefSeq) general transcription factor IIH subunit 1
KO
K03141
transcription initiation factor TFIIH subunit 1
Organism
scan
Serinus canaria (common canary)
Pathway
scan03022
Basal transcription factors
scan03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
scan00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
103826770 (GTF2H1)
09124 Replication and repair
03420 Nucleotide excision repair
103826770 (GTF2H1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
scan03021
]
103826770 (GTF2H1)
03400 DNA repair and recombination proteins [BR:
scan03400
]
103826770 (GTF2H1)
Transcription machinery [BR:
scan03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
103826770 (GTF2H1)
DNA repair and recombination proteins [BR:
scan03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
103826770 (GTF2H1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PH_TFIIH
BSD
GeBP-like_C
Motif
Other DBs
NCBI-GeneID:
103826770
NCBI-ProteinID:
XP_030096005
LinkDB
All DBs
Position
Unknown
AA seq
548 aa
AA seq
DB search
MATSSEEVLLIVKKVRQKKQDGALYLMAERIAWAPEGKDRFTVSHMYADIKCQKISPEGK
AKIQLQLVLHAGDTTNFHFSNESTAVKERDAVKDLLQQLLPKFKRKANKELEEKNRMLQE
DPVLFQLYKDLVVSQVISAEEFWANRLSLNAGDNSAAPNKQDVGISAAFLADVRPQTDGC
NGLRYNLTSDIIESIFRTYPAVKMKYAENVPHNMTEREFWTRFFQSHYFHRDRLNTGSKD
LFAECAKLDEKGLKAMVSQGVKNPLIDLTALEDKTLDEGYGVASVASTSNASKSARESSN
AAIIKRFNHHSAMVLAAGLRKQEAQNDHYSETSSTDGNSRDSDFFQPPLKKVKLQEAIEY
EDLSKNNSVKTIALNLKKSDRYYHGPTPIQSQQYATSQDIINSFQSIRQEMEAYVPKLTQ
VLSSGDAASTIAVLSPGGALMQGGTQQAINQMVPNDIQSELKHLYVAVGELLRHFWSCFP
VNTPFLEEKVVKMRSNLERFQVTKLCPFQEKIRRQYLSTNLVSHIEEMLQTAYNKFHTWQ
SRRMLKKT
NT seq
1647 nt
NT seq
+upstream
nt +downstream
nt
atggcaacgtcatctgaagaagtgttgctgatagtgaagaaggtgcgccagaaaaagcag
gatggggccctgtacctgatggccgaacgcattgcctgggcacccgagggcaaggaccgc
ttcaccgtcagccacatgtatgcagacatcaaatgccagaaaatcagtccagaaggcaaa
gctaaaattcagctgcagctggtattgcatgcaggggacacaaccaacttccacttctcc
aatgaaagcacagcagtgaaggagcgagatgcggtcaaggatcttcttcaacagctcttg
cccaagttcaaaaggaaagctaataaagaacttgaggagaagaacagaatgctgcaagaa
gatccggttttgtttcagctctataaagaccttgttgtgagccaagtaatcagtgctgaa
gaattctgggccaaccgtttaagcctgaatgcaggggataattctgcagcacctaataag
caggacgtgggcatctctgcagcattcctggctgatgtacggcctcagacagacggctgc
aatgggctgaggtacaacttgacttcggatattattgaatccatatttcggacataccct
gcagtaaaaatgaaatatgcagagaatgttccacataacatgactgagagagaattctgg
acacgattttttcagtctcattattttcatcgggacaggctcaatacaggctcaaaagac
ctctttgcagaatgtgccaaactggatgagaaagggttaaaagcaatggtgtctcaagga
gtgaaaaaccctctgatagatttaacagctttggaagataaaacattagatgaaggctat
ggtgttgcttctgtggcctctacatcaaatgcctcaaagtctgctagagaaagcagcaat
gctgccatcataaaacgctttaatcatcacagtgccatggtccttgcagctggcctcagg
aaacaagaagcacaaaatgaccattacagtgagaccagcagtacggatggaaactccagg
gattcagatttctttcagccaccactgaaaaaggtaaaactgcaggaggccattgaatac
gaagatttatcaaagaataatagcgttaaaactattgcactaaacttaaagaagtctgat
aggtattaccatggtccaactccaattcaatcacagcaatatgcaactagtcaggatata
attaattcatttcagagtattagacaagaaatggaagcatatgtacccaaactaactcag
gttctttcaagtggtgatgctgccagcactattgcagtcctgtcacctggaggagcactt
atgcagggtggaacacagcaagccataaaccagatggtgccaaatgacattcagtctgaa
ttaaaacacttgtatgtggcagtaggggaactgctacgacacttctggtcctgctttcct
gttaacacaccattcctagaagaaaaggttgtgaaaatgaggagcaacttggaaagattt
caggttacaaagctctgcccattccaagaaaagattcggagacaatatttaagcacaaac
ttggtaagtcatatagaagagatgctgcagacagcctacaataagttccacacgtggcag
tcccggcgcatgctgaagaagacgtga
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