Serinus canaria (common canary): 103827310
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Entry
103827310 CDS
T05755
Symbol
IFT88
Name
(RefSeq) intraflagellar transport protein 88 homolog isoform X1
KO
K16474
intraflagellar transport protein 88
Organism
scan
Serinus canaria (common canary)
Brite
KEGG Orthology (KO) [BR:
scan00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
scan03037
]
103827310 (IFT88)
Cilium and associated proteins [BR:
scan03037
]
Primary cilia and associated proteins
Intraflagellar transport (IFT) complex B1
103827310 (IFT88)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_2
TPR_1
TPR_12
TPR_7
TPR_19
TPR_14
TPR_8
TPR_6
TPR_16
ANAPC3
TPR_11
TPR_17
TPR_10
TPR_9
TPR-S
TPR_15
TPR_21
DUF2989
NatA_aux_su
DUF6584
Motif
Other DBs
NCBI-GeneID:
103827310
NCBI-ProteinID:
XP_009101067
UniProt:
A0A8C9MQY4
LinkDB
All DBs
Position
Unknown
AA seq
816 aa
AA seq
DB search
MMQNVHPATENNEDDLYSGYNDYNPMFDTEDLENDVAFQQAARTSHGRRPPVTAKIPGTS
SPRPLATGFGSKATLTSSMGRPVTGTIQDGISRPMTAVQAAGYTKAAVRGSSFDPLGQAR
GPASPLEKKTSDSLEEKMRQLEKKVNELVEESCVANSCGDLKLALEKAKEAGRQERELLR
QREQIAPPESINLDLTYTVLLNLASQYVANEMYAEALTTYQVIVKNKMFSNGGILKVNMG
NIYLKQRNYSKAIKFYRMALDQITSSHKQMRIKIMENIGVAFIKTGQYVDAISSFEEIMS
ISPNLKAGFNLILCYFAIGNGEQMKKAFKNLIEVPLEVDYEDKYISLNDDLHTNLLLEAI
KNDSLSQIERERKSLAEEYIMTAAKLIAPAIETSFAVGYDWCVDAVKASHYVELANDLEI
NKATTYLRQQNFNQALETLKMFEKKDSRVKSAAATNLSFLYYLGNELEQATNYADLAVNS
DRYNPAALTNKGNTVFANGDCEKAAEFYKEALRNDSLCTEALYNLGLAYKKLNRIDEALD
CFLKLHAILPNSAQVLYQLASLYQIMEDPNQAIEWLLQLISVVPTDPHVLSKLGNLYDTE
GDKSQAFHYYCESYRYFPSNIEVIEWLGAYYIDTQFCEKAIEYFERAALILPTQVKWQLM
VASCYRRSGNYQKALEKYKVIHRKFPENVECLRFLVRLCTDMGLKEVQEYITKLKKAEKL
KEIREQRIKSGREGSARGRKEGSGDSGGTKGERLSAKLKVLPGTSEPYESSSSKEIDASY
ADPLGPQPERPKTAARKRMEEDDFADEELGEDLLPE
NT seq
2451 nt
NT seq
+upstream
nt +downstream
nt
atgatgcaaaatgtgcatccagctactgagaataatgaagatgatctctattctggctac
aatgattataatcccatgtttgacacagaggatttagaaaatgatgtagcttttcaacag
gcagcgagaacaagtcatggaagaagaccccctgtgacagccaaaattcctggtacatca
agtccaagacctctagctactggatttgggtcaaaggcaactttaacttcatctatggga
agacccgtgacaggaactatacaggatgggatttctcgaccaatgacagcagtgcaagct
gcaggttacactaaagctgctgtgagaggttcttcatttgatcctcttggccaagcaaga
ggtcctgcttcacctttggaaaagaaaacttcagacagtttagaagagaagatgaggcag
ttggaaaaaaaagtgaatgaactggttgaagaaagctgtgttgccaatagctgtggagat
ttgaaattggctctggagaaagcaaaagaagctggaagacaggaaagagaattgttgaga
caacgtgaacaaatcgctcctccagaaagtatcaacttagacctcacttacacagttctc
ctcaatctggccagtcagtatgttgctaatgaaatgtatgctgaagcactgactacttac
caagttatagtgaagaataagatgttcagcaatggaggtatactgaaggtaaatatggga
aatatatatttaaaacaacggaactattccaaagctatcaaattctaccgtatggctcta
gaccagattactagttcccacaaacagatgaggataaaaataatggaaaatattggagtt
gcatttattaaaactggccaatacgttgatgccatttcttcatttgaagaaataatgagc
atatccccaaacctgaaggcaggcttcaacctgatcctatgttactttgctattggaaat
ggtgagcaaatgaagaaagccttcaaaaacctcatcgaagttcccttggaagtggattat
gaagataaatacatttcactaaatgatgatctacatacaaatctactgcttgaagccatt
aaaaatgacagtttaagtcaaatagaacgtgagaggaagtccttggcagaggaatacatc
atgacagctgctaaactcattgcaccagcaatcgagacatcttttgcagtaggctatgac
tggtgtgttgatgcagtgaaagcttcccactatgtagaattagccaatgatctggaaata
aataaagccactacttacttgaggcaacagaattttaaccaggcactggagactttgaaa
atgtttgaaaaaaaggatagcagagtaaagagtgcagctgcaacaaacctttcattcctt
tattatttggggaatgaattggaacaagcaactaactatgcagatttagcagtaaattct
gataggtacaatccagcagctctaactaacaaaggaaatactgtttttgcaaatggagac
tgtgaaaaagcagctgaattttataaggaagctctcaggaatgattccttatgcactgaa
gcactttataatcttggtttagcttacaagaagttaaacaggatagatgaagctttggat
tgttttctgaaactccatgcaatccttccaaatagtgcccaagtcctttaccaactagca
agcctataccagatcatggaagatcccaatcaagccatagagtggctgctgcagttgatc
agtgtagtaccaactgatccacatgtactttcaaagctagggaatttatatgatactgaa
ggcgataaatcccaggcttttcattattactgtgagtcgtaccggtatttcccttccaac
attgaggtcattgaatggcttggagcgtattacattgacacccaattctgtgaaaaagcc
attgagtactttgaaagggcagcacttatcctgccaacacaagtgaagtggcagctgatg
gttgccagttgctacagaagaagtggcaactaccagaaagctctggagaaatacaaagtc
attcacagaaaattcccagagaatgttgaatgcctcagatttttagttcgtctctgcaca
gacatggggctgaaagaagtccaggaatatataacaaagctcaagaaggcagaaaaatta
aaagaaatcagagagcagcgcattaaatctggcagagagggcagcgcacgtggccgcaaa
gagggaagtggtgatagtggaggtaccaaaggggaaagactgagtgccaaactaaaagtt
ctgcctggaacaagtgaaccctatgaaagtagcagcagtaaagaaatagatgcctcctac
gcagatccacttggcccacaaccagaaagaccaaaaacagcagcaagaaaaagaatggag
gaagatgattttgctgatgaagaactaggagaggatctgcttccagaatag
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