Serinus canaria (common canary): 103827415
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Entry
103827415 CDS
T05755
Symbol
RB1CC1
Name
(RefSeq) RB1-inducible coiled-coil protein 1 isoform X1
KO
K17589
RB1-inducible coiled-coil protein 1
Organism
scan
Serinus canaria (common canary)
Pathway
scan04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
scan00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
103827415 (RB1CC1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
scan01009
]
103827415 (RB1CC1)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
scan04131
]
103827415 (RB1CC1)
03029 Mitochondrial biogenesis [BR:
scan03029
]
103827415 (RB1CC1)
Protein phosphatases and associated proteins [BR:
scan01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
103827415 (RB1CC1)
Membrane trafficking [BR:
scan04131
]
Autophagy
Autophagosome formation proteins
ULK complex
103827415 (RB1CC1)
Mitochondrial biogenesis [BR:
scan03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
103827415 (RB1CC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ATG11
ATG17_like
TBK1_ULD
DUF5959
Motif
Other DBs
NCBI-GeneID:
103827415
NCBI-ProteinID:
XP_030085904
LinkDB
All DBs
Position
Unknown
AA seq
1598 aa
AA seq
DB search
MKLYVFLVNTGTTLTFDTELAVQNVADLKHAIQTKYKIAIQHQVLVVNGGECMAPDRRVC
SYSAGTDTNPIFLFNKEMILCERPPAIPKTTFSAENEMELKVEESLMMPAVFHTVASRTQ
LAVEMYEVAKKLCSFCEGLVHDEHLQHQGWAAIMANLEDCTYSYQKLLYKFENVYSSYLQ
SIDDIKLKLTHLGSAVSIMAKIPLLECLTRHSYRECLGRLESSPDNGGAESEETEDGKSP
ELVLYPDVSKVNSKSMLTSFCKSVERSALEGTDPENVKDDKESGQSAAVQDNEMSVQLKD
DDQPSFNVSLLDWINVQDRPNDVESLVRKCFDSMSRLDPRIIQPFLAECRQTIAKLDNQN
MKAIKGLEDRLYALDQMIASCSRLVNEQKELAQGFLANQKRAENLKDPSVLPDLCLSHAN
QLMIMLTNHRKLLDIKQKCTTAKQELANNLQVRLKWCCFVMLHADQDGEKLQALLRLVTE
LLERVKVVEALSTVPQMYCLAVVEVVRRKMFIKHYREWAGALIKDGKHLYEAEKAKRESF
GKLFRKSFLRNRLFRGLDSWPPSFCTRKPRRFDSELPDISLSDLQFLQSFCPSEVQPLLR
VPILCDFEPLHQHVRALHNLVKAAQSLDEMSQTITDLLNEQKASNSQASPQSATTPRMES
TPGTTIATSSRTPPSLSLQGPLCPPVCPPAPLEELSPDSIDAHTFDFETIAHPNLEQALK
QGSLDLDSLAESPESDFMSAVNEFVIEENPVSPNVISDPQSPEMMVESLYSSVINAIDSR
RMQDTSACVKDVSVENASLSVCVEKCRVIAQDSKVHLRGIKEDLCHFRTLVQREQCDFSN
SLKCTSLEIVNTIEKVKLSLEKTLNDKHQNELQSLKSEYEAKINKLLEDGEENKKKIKKL
KGDLLGLEEVLQNKNDEFAIVKNEKEAVVCLQNEKDQKLLELECQMETQNSEIKELRQSR
EIVLEDLKKLHLENNEKLQLLRAELESLEQSHLKELESNLQARHLQEFEKVLAEHKDCLD
KLKKENEHRLEQMQESHEVVIKEKQQQVDELQLKVSDLSDLRCKLEVELALKEAETDEMK
LLLEESRNQQQETLRSQVDKETESLRKEIDKLNNKIQISSDEHQVGLSELRTLMTIEKDQ
CISELVNRYEEETNLLRTELNKVTLLHQKTAEAEKRLSEQIAELQSKLELEMTALEKEKT
EKLSLCEQQEKYEAIIHKLKEEKELLISNQEQDRQLLIQKLNCEKEDAVQTACKELELQR
EAAEKGLLEKILQLEMQVNQSPPAESSAESNLVAELQEKLQEEKMKFLEQLEEQEKRKNE
EMQNIRTSLTAEQQTNFNTVLAREKMKKENIINDLSDKLKVLTQQQEKDKDLIETLSEDR
ARLLEEKKKLEEEVNKLRSSNFSPSTYLAAASEACGACAADVPTDTERLVADFGAEGRMD
STMETSMMAVHENVHMSEEKQRIMLLERTLQLKEEENKRLNQRLMSQSMSSVSSRHSEKI
AIRDFQVGDLVLIILDERHDNYVLFTVSPTLYFLHSESLAALDLKPGECASGASRRPWVL
GKVMEKEYCQAKKAQNRFKVPLGTKFYRVKAVPWNKKV
NT seq
4797 nt
NT seq
+upstream
nt +downstream
nt
atgaagctatatgtatttttggtcaacactggaactacccttacatttgatactgaactt
gctgtacaaaatgtggctgatctgaaacatgcaattcaaacaaagtataagattgccatt
cagcaccaagtactggttgtcaatggaggagagtgcatggcgccagacagaagagtgtgt
agttacagtgctggaacagacaccaacccaatttttttattcaacaaagaaatgatcttg
tgtgaacgtccaccagctatccccaaaaccacgttttcagcagagaatgagatggaattg
aaagtagaagaatctcttatgatgcctgcagtgtttcatacagtagcatcacgaacacag
cttgctgtggaaatgtatgaggttgccaagaagctttgctccttttgtgaaggtcttgta
catgatgaacatcttcagcatcaaggctgggctgctataatggccaacttggaagattgt
acatactcttaccaaaagctgctttacaagtttgaaaatgtgtattcaagctatttgcag
tccatagatgatatcaaattgaaacttacacacttgggttctgctgtttctattatggcc
aagataccgctgctggagtgcctaacaagacatagttacagagagtgtttaggaagactg
gagtcttcacctgacaatggaggagcagaaagtgaagaaactgaggatgggaaatctcct
gaattggtgctttatcctgatgtatctaaagtgaacagtaaatcaatgttaacatcattt
tgcaagtcagttgaacgttcagctttggaaggcacagatcctgaaaatgtaaaagatgat
aaggaatctggtcaaagtgctgctgtccaggacaatgaaatgtcagtacaattgaaagat
gatgatcagccttccttcaatgtgtctttgttagactggattaatgttcaagatagacct
aatgatgttgaatccctggtcagaaaatgttttgattccatgagcaggcttgatccaagg
atcatccaaccctttctggcagaatgtcgccaaactatcgccaaactagataatcagaac
atgaaggccattaaaggtcttgaggatagactctatgcattggaccagatgatagcaagc
tgcagcagactggtgaatgaacaaaaagaacttgctcagggatttttggctaatcagaag
agagctgagaacttgaaagatccttctgtgctgcctgatttgtgtttgagtcatgcaaat
cagctgatgattatgttaactaatcacagaaaactgttagatattaaacagaagtgtacc
actgccaaacaggaacttgcaaataatctgcaagtcagactgaagtggtgttgttttgta
atgcttcatgctgaccaagatggagagaaactacaagcactgcttcgtcttgtaacagag
ctcctagaaagggtcaaagttgtagaggctctcagcactgttcctcagatgtactgttta
gctgttgttgaagttgtgaggagaaaaatgttcataaaacactacagggagtgggctggt
gctttaataaaagatggaaaacatctatatgaagctgaaaaggcaaaaagggaatctttt
ggtaaactctttaggaagtcttttctaaggaatcgtttgtttagaggacttgactcctgg
cctccatccttttgtacacgaaaacctcgcagatttgatagtgagcttccagatatctcg
ttgagtgacttgcagtttttgcagtctttctgtccttcagaagtacagccattactcagg
gttcccatactttgtgactttgaacctcttcaccagcatgtacgtgctctacataacctg
gtcaaggcagcacagagtttggatgaaatgtcacaaactattacagacctgctgaatgag
caaaaggcctccaacagtcaagcatcgccacaatctgctaccacaccaaggatggaaagt
actccaggaaccacaattgctacctcttcaagaactcctccatcactcagtcttcagggt
cctctgtgtcctcctgtgtgtcccccagctccattggaagaattgtctccagacagcatt
gatgctcacacgttcgattttgaaactattgcccatccaaacttggagcaagctcttaag
caaggatcattagacttggattcattggcagagagtccagaatctgactttatgtcagca
gttaatgaatttgtaatagaagaaaatccagtgtctcctaatgtcataagtgacccacaa
agcccagaaatgatggtggaatccctttattcttcagttatcaatgcaatagacagtagg
cgtatgcaagatacaagtgcttgtgtaaaggatgtttcagtagaaaatgcttctctcagt
gtttgtgtggagaagtgtagggttattgctcaagactcaaaggtacatctaagaggcatt
aaagaagatctttgccatttcagaacacttgtacaaagagaacagtgtgacttttctaat
tctttaaaatgtacttccttagaaatagtaaatacaattgaaaaggtaaagctttcactt
gaaaaaacgctaaatgataaacatcaaaatgaattacagtctttgaaaagtgagtatgaa
gctaaaattaataaattattggaggatggtgaagaaaataaaaagaaaataaaaaagtta
aagggtgacttgttaggtcttgaggaagttcttcagaataagaatgatgaatttgcaata
gtaaagaatgagaaagaagctgtagtttgccttcagaatgaaaaagaccagaaattactt
gaattggaatgccaaatggagacacaaaattctgaaatcaaggaactgaggcagtcacgt
gaaattgtacttgaagacttgaaaaaacttcatcttgaaaacaatgagaaactacaactc
ctgagggcagaacttgagagtttagagcaaagccatttaaaagaactggaaagcaaccta
caagccaggcatttacaggaatttgagaaggtcctagctgagcacaaggactgtttggat
aaattaaaaaaagagaatgagcatagacttgaacaaatgcaggaatctcatgaggtagtt
atcaaagagaagcaacaacaagtagatgagttacaactgaaggtttcagatctgtctgat
ttgaggtgcaaactagaagttgaacttgccctgaaagaggcagaaactgatgaaatgaag
cttcttttggaagaaagcagaaaccagcaacaagagaccttaagatctcaggttgacaag
gaaactgaaagcttaagaaaggagatagataaattaaacaataaaatacaaatcagcagt
gatgaacatcaagtgggcttatcagaactaaggactctgatgacaattgagaaagatcag
tgtatttctgagctagtaaataggtatgaagaagaaacaaatttacttagaactgaatta
aataaagtaacgcttcttcatcaaaaaactgctgaggcagaaaaaagactttcagagcaa
attgcagaactgcaaagtaagttagagttggaaatgactgccctagagaaggaaaaaaca
gaaaaactgtctctctgtgagcagcaggaaaaatatgaagctatcatccataagctaaag
gaagagaaagaactgttaatatctaatcaagaacaagacaggcagttgctcattcagaag
ctcaattgtgaaaaagaggatgcagtacaaactgcttgtaaagagttggaattacagagg
gaagcagctgaaaaagggcttttggaaaaaatactgcagcttgagatgcaagtgaatcag
agtcctcctgctgaatcatctgctgaatcaaacctagttgctgaacttcaggagaagctt
caggaagaaaaaatgaagttcttagagcagcttgaagaacaagagaaaagaaagaatgaa
gaaatgcagaacatcagaacatcactcactgcagagcagcagaccaactttaacactgtt
ctagcaagagagaaaatgaaaaaagaaaacataattaatgatcttagtgacaaattaaaa
gtgcttacacaacagcaagaaaaagataaggatttgattgaaacactttctgaagataga
gctcgcttacttgaagagaagaagaaacttgaagaagaagttaataaactgagaagcagt
aatttttctccatcaacctacttggcagcagcgtcagaagcttgtggagcctgtgcagct
gatgtgcccacagacacagagagattggttgctgactttggggctgaggggaggatggat
tccacgatggaaaccagtatgatggctgtgcatgaaaatgttcatatgtctgaagaaaag
cagaggataatgttgctagaaagaactttacagttgaaagaagaggaaaataagagatta
aatcaaagattgatgtcccaaagcatgtcatcagtatcctcgagacattctgaaaaaata
gcaattagagattttcaggttggcgatttggtactcattatcttggatgaaaggcatgac
aactacgtgttgtttactgttagtccaaccttgtatttcttgcactcagagtcccttgct
gcactggatctcaaaccaggtgagtgtgcatcgggtgcatctaggagaccatgggtgcta
ggaaaagtgatggaaaaggagtattgccaggcaaaaaaggcacaaaacagattcaaagtt
cctttgggtacaaaattctacagagtgaaagcagtaccatggaacaagaaagtataa
DBGET
integrated database retrieval system
