Serinus canaria (common canary): 108962240
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Entry
108962240 CDS
T05755
Name
(RefSeq) protocadherin beta-15-like
KO
K16494
protocadherin beta
Organism
scan
Serinus canaria (common canary)
Brite
KEGG Orthology (KO) [BR:
scan00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
scan04515
]
108962240
Cell adhesion molecules [BR:
scan04515
]
Cadherins
Protocadherins
108962240
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
Cadherin_CELSR2_9th
Motif
Other DBs
NCBI-GeneID:
108962240
NCBI-ProteinID:
XP_030085226
LinkDB
All DBs
Position
Unknown
AA seq
859 aa
AA seq
DB search
MLGAAEDCGWRFWRAMACGRRSGDRKRQVILLILCVCVCQSEAETLRYSVPEEMERDSFV
ANIAKDLGVPLSQLAARKARVVSEGDEQFFRLNQNTGVLTAKESLDREEICPQSDTCTLV
FKIFFENPLQLIRGEVEVRDVNDNSPVFPEKEMVLKILETASPGSRFPLESAQDKDVGIN
SLQNYSLAPNPHFSLAIGTAKDGVKDLELVLQRQLDREEQGELNLLLTATDGGSPPRSGT
AQVRIMVLDANDNIPVFERETYEVRLAENSPLEQLVVRVTAADTDEGSNGEVGYAFTQTS
ERSRQLFQLNPTTGEIRVAGKLDFEETKSHKMVVKATDGGGLSAHCKVQVEVLDVNDNTP
EIALTSLSTSIPEDAPPRTVVALFSVRDRDSGDNGRXXXXXXXRTECSIDGDLPFSLTPT
FDNYYELRTNAALDRERTAEYNITITATDWGRKRLSSQESIFVQISDVNDNPPEFTQEVY
TMSVTENNSPMLRIGSMKATDADAGINARVNYALVRQEGKEQHEVSVNAENGDVYILRPL
DYEKVRAFEVTVRAADGGSPPLSAQAVLHIVVRDENDNAPVLLHPAPESSAAAELVPRWA
PSGYLVAKVVAVDADAGQNAWLSYELAKATEPGLFRVGLHSGEVRTARAVTERDAARQRL
IVLVRDRGQPSRSATATLAVALVDGFSEAYLRVSEEAPAAEPDGPLTLYLIGSLVCVSAL
FLATAVAAAVVKVRRARRSETETLPTFPTTATESSAGSLPRSYVYDVCFAAGTVNSEFRF
LRPLFPCFPAGLPPGPSEQRSSVCSQDAANLGAEGDWAAQDSAPFSEDTGPRAAGAVCPA
NRELELNVSSEQNPWLAHQ
NT seq
2580 nt
NT seq
+upstream
nt +downstream
nt
atgctgggagccgccgaggactgtggatggcggttttggagagcgatggcctgtgggaga
cggagcggagacagaaagaggcaagtgatcttgcttattctgtgtgtttgcgtgtgtcag
agcgaggctgaaaccctccgctactccgtgccggaggaaatggagagggactcctttgtc
gccaatatcgccaaggacctgggggttcctctgagccagcttgcggctcgcaaagcccgc
gttgtgtccgaaggggacgagcagtttttccggctcaatcaaaacaccggagtcctgacg
gcaaaggaatcgctggaccgagaggagatctgtcctcagagcgatacctgcacgctcgtc
tttaagatattctttgaaaatccgttgcagcttatccgcggggaggtggaagttcgtgac
gtaaacgacaactcgcccgtgttcccggagaaggagatggttttaaagattctggaaaca
gcatctcctggctcccgttttcccctggaaagcgcccaagacaaggacgtgggcattaac
agtttgcagaactacagccttgcccccaatcctcatttctccctcgctattggaacagcg
aaagatggagtaaaagacctggaacttgtcctgcagcgccagcttgatcgtgaagagcag
ggagagctgaatttacttctgaccgccaccgacggggggtcaccacccaggtcgggcacg
gctcaggtccggatcatggtgctggatgccaatgataacattcctgtcttcgaaagggag
acctacgaggtgcgcctggctgagaacagccccctggagcagctggtggtcagagtcact
gccgctgataccgacgaagggtccaacggggaggttggttatgcctttacccagacatcg
gagcgatcccggcagctcttccagctgaacccgaccaccggtgaaatacgagtagcaggc
aagctggattttgaggaaacaaaatcccacaagatggtggtgaaagccacggacggcgga
gggctatctgcgcactgcaaagtacaggtggaggtcctggacgtgaatgacaacaccccg
gagatagcgctcacctccctcagcacctccattcccgaggacgccccgccacgcaccgtg
gtggccctgttcagtgtgcgggaccgggactcgggagacaacggcaggnnnnnnnnnnnn
nnnnnnnncaggacggagtgttccatcgacggggacttgccgttcagtctcacccccact
tttgataattactacgaactgagaacaaacgcggctctagacagggagaggacggcggag
tataacatcaccatcacagccacggactggggcaggaagcggctgagctctcaggaaagc
atcttcgtgcagatctcggatgtgaacgacaatcccccagagttcacccaggaggtttac
accatgtctgtcacggaaaacaacagccccatgctccgcatcggcagcatgaaggccacg
gacgccgacgcaggaataaatgcccgtgtgaattacgcactggtgaggcaggagggcaaa
gagcagcacgaagtgtcagtcaacgctgaaaacggggatgtttatatcctccgcccgctg
gactacgagaaggtgcgcgccttcgaggtgacagtgcgcgcagccgacggcggctccccg
ccgctcagcgcccaggccgtgctgcacatcgtcgtgcgcgacgagaacgacaacgcgccc
gtgctgctgcacccggcccccgagagcagcgcggccgcagagctggtgccgcgctgggca
ccgtccggctacctggtggccaaggtggtggcggtggacgcggacgcggggcagaacgcg
tggctgtcctacgagctggccaaggccacggagccggggctgttccgcgtggggctgcac
agcggcgaggtgcgcacggcgcgggccgtgacagagagggacgcggcccggcagaggctc
atcgtgctggtgcgggaccgcgggcagccctcgcgctctgccaccgccaccctcgccgtg
gcactggtggatggcttctccgaagcctatttaagggtgagcgaggaggcaccggccgcc
gagcccgacgggccgcttactctgtacctcatcggctccctggtctgcgtgtcggcgctg
ttcctcgccaccgcggtggccgccgcggtagtgaaggtgcggcgggccaggcggagcgag
acggagactttgcccacgttcccgacgactgccacggagagcagcgcgggctccctgccc
cgcagctacgtgtacgacgtctgcttcgcagccggcaccgtcaacagcgagttccgtttc
ctcaggccgctcttcccctgcttccccgccgggctgccccccgggcccagcgagcagcgg
agctcggtgtgctcgcaggatgcggccaacctcggggccgagggcgactgggctgcgcag
gacagtgctcccttctctgaagatacagggcccagagctgcaggcgcagtttgccctgca
aacagggagctggagctaaatgtcagttctgagcaaaacccttggctcgcccatcaataa
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