Serinus canaria (common canary): 108962376
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Entry
108962376 CDS
T05755
Name
(RefSeq) spectrin beta chain, non-erythrocytic 2-like isoform X1
Organism
scan
Serinus canaria (common canary)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Spectrin
PH_9
PH
Motif
Other DBs
NCBI-GeneID:
108962376
NCBI-ProteinID:
XP_018772003
LinkDB
All DBs
Position
Unknown
AA seq
2086 aa
AA seq
DB search
MSGSTARKVQPFTISTRLSLPKCAADFPGDACPGIALASALDSHRGLRRSINERISLYLA
HARAGPAAPAGHPRSPSPGEDGGPDEDRLNRSSLARSIKKIPLSNWYGDAGTGEAGGPGD
PARAGSERNHNNNNSRTGKAQFKVFLRKDVDAEDKQQEPGTVQASVFCSPVDRCSPLYAL
AASPVSSPQKESPKGKESAATPRCSGRSGVGAAPLLDLSPLIAQFNREMLQAESWVRGKL
RDLKDGCDLQDWEEVAQTLQRDMKDFENTLIKLSQMGEQLMWRASPSAEAVRRQLLALQD
QWQLLKQTAASQSKALGGLRTLQDFNRKAERLEAWIKHKEEKPSLAAFLQESPDKIQLTR
RILDLKQEEQQFQSLHKELNSLAQKLEKQGKNESRNVSARRKHLNKAWLRLQGTLKEHHE
ALQLALEVASFLQQADILLGVIHTKQSSICSTGKPGEGEPCQDRDVRDIASQVMMLDVTV
SQLLNLQPSLAARVTSKHRDVKDSWAQLQQALRTGKVPAWASSSPGGKASAPNVEPRGDD
SSHGAVGKEAAAKWTRGLGSKVPKDVLEKMAENKKGEESSPGSPAVGQPALGGDNKRRRK
AEAERGIRQLETQVQDVCQVVNTTLSPYKESVGMGVPPCPVANLEAARMRQETLAPSSSA
RAVLLEGPGQGRPPGSPQVEAMLRELGELWEDLQRRHQENGVVLQEIDKALRLVGELDQA
ERWLQDVAGLLVEPAAMRSPAELRQDLEEMSRLEKQLLLCGLKLQALREEAAGEVPTEHE
GARKMQRKVEMVEEKLAHVQAALRHRAADLRDSLVLSEFLQDLQEEEARSQQGSAAPGSG
RCGSQGCFPLLSAQAEKSPSSEDMSRPLGELQEAVEMLNDAAKERERVMEVAAETESLEH
LVAKMSPQLEALQCRAKALSEDIALAEKSFTTVKSEKDLQGLQGLLSCQQEMEHAASQTL
QGQLEELERAAARLQELCPARQCPVSRELQETLWAWAGLRELLRETRLRVQQASRLRHFF
KDYLAMISWTEDTRAQIFSESPSSSSISETPCEELERRIEEKLKEFEALAAAGQQLVSEE
HYLSATIKERLEELQSMLGWVLVRWRAQRHQQQDLGSRQEDRRELENLSSTSPTGQEQHV
SRVPPHLESIHSPVKFMPSSLLEPVQRLEPKLPEKTAISPPTSPLSDAPSGVEQSWGEPS
SKTDGDVESPKEAGTWDPAETSTLLLPPRGPCGLGGTVNLILSIGKKGEKKKAQLLASSE
RPGEEALPAVQVEARKTCTAKRPPAAVRRPAAASGGMAAVSHTLPKAGAGCLFHSLQRRE
QARAEQARLLTLRGIMGDSSLRPTPEECHGPSNTWPQKCGWRKGGPGAAAAGPQLGELLL
YVRNPLVQDIDAECGAAPQKPCLPHPKITCPRVSLGSVLSLELPRDAVVLGCHRGAEARQ
QEAEGKEQRQDQGVRPWKPSGTHGVGWQEDRHSPQGPSKRLGMSPKSEQETWFEEVSFKP
SYSQQRAHRAGKEHRNPQQPGSTSKDLLDLRPSRPARVGMGDELATRFGQDDSPTASGRA
RHHRAAWLELGSSPASTPGRAGAIPSPACAQQPASSSQPRGSPASPAAPTQLSVFEWALG
SPQPQSPALGTKEVCHPAHRQFEEEEEELQAIWDGAHERGAQSSPGGSCASHRTGSRAGS
LPSPSATAGGPLILSSANNVLVAKFTLPTAAQLLHSPSGAQSPSVVHSSSGSPSGLRVSP
HVEQLVSAAPLDASSAWDQRRHQQEERENSKVLPGKMEFQMMEGTLERKHVLQTGGRKAS
CRTWGLFHAVLMRQTLCFYQDRRDSLKSSVVALPLNLSGAVCTPDAEYTKKTNCFRLQLQ
DGSEYLLRAPTQPLMNEWVSKLQQNSGFPKVDYFQAAAQCVEGTGGTGSFSKVSSPGISH
LQGHHQVTSTKSQEIVVLPCASPLLQRPLGSQDGPVDGTVTAAENAQGTGHKEQQWSSRA
SPGLWDNICPEDDYGLVANKRRSYSFTSATYQKISPLAVPQEPAEAGSSYSVTLYIGEQV
SAVPRARCHSFVAPTGSPRDTRGEKTTSPPRTKNKSVFKKFFGKKE
NT seq
6261 nt
NT seq
+upstream
nt +downstream
nt
atgtcgggcagcacggcgaggaaggtgcagcccttcaccatcagcaccaggctctcgctg
cccaagtgtgccgcggacttccccggagacgcctgccccggcatcgccctcgcctccgcg
ctggacagccaccgcggcctccgccgcagcatcaacgagcgcatctccctctacctggcc
cacgcccgggccggccccgccgcccccgccgggcacccccgcagccccagccccggtgag
gacgggggccccgacgaggaccggctgaaccgcagttccctagcccgctccattaagaag
atcccgctgtccaactggtacggggacgctggcacgggagaggcagggggacccggggac
cccgcccgcgccggcagcgagaggaaccacaacaacaacaacagtaggacagggaaagct
cagttcaaggtgttcctcaggaaggatgtggatgcagaggacaagcagcaggagcctggg
actgttcaggccagtgttttctgctctccagtggacagatgttctcccttgtatgcgctg
gcagcatccccggtgtcatcaccccagaaagagagccctaagggcaaggagtctgctgca
acaccgagatgcagtgggcgaagtggtgtgggagcagcccctctccttgacctgagtcct
ctgatagcccagttcaaccgggagatgctgcaggcagagagctgggtgcgaggcaagctg
cgggacctgaaggacggctgtgacctccaggactgggaggaggtggcccagaccttgcag
cgggacatgaaggattttgagaacacactgataaagctcagtcagatgggtgagcagctg
atgtggagggcaagccccagtgcagaggccgtgcggaggcagctgctggccctgcaggac
cagtggcagctcctgaagcagacggctgccagccagagcaaagccctgggggggctgcgg
actctgcaggactttaacaggaaagctgagcggctggaggcatggatcaagcacaaggag
gagaagccctctctggcagccttcctgcaggaaagcccggataagatccagctcactcgc
cgcatccttgacttgaaacaggaggagcagcagttccagagtctgcacaaggagctgaac
agcctggctcagaagctggaaaaacaaggcaaaaatgagagcagaaatgtctcagcccgg
cgcaagcacctcaacaaagcgtggctgcggctgcaggggaccctgaaggagcaccacgag
gctctgcagctggccctggaggtggcctccttcctccagcaagcagacatcctgctcggg
gtcatccatacaaagcagagcagcatctgcagtacagggaagccaggggagggcgagcct
tgccaggatcgggatgtcagggacatagccagccaggtgatgatgctggatgtgacagtg
tcccagctcctaaacttgcagcccagcctggcagcccgagtcacctcaaagcacagagat
gtaaaggacagctgggcgcagctccagcaggcactgaggacaggcaaggttccagcatgg
gcaagcagttccccggggggcaaagcctcagctccgaatgttgagcctcgaggagacgac
agcagtcacggggctgtgggtaaggaagcagcagccaaatggacaagaggactcggcagc
aaggtaccaaaagatgtgctggagaagatggcagagaacaagaaaggagaggagagcagc
cctggctccccagcagtgggacagcccgctcttggaggggacaacaaaaggaggagaaag
gcagaggctgagcgggggattcggcagctggagacccaagtgcaggatgtttgccaggtg
gtgaacacgactctgtccccatacaaggagagtgtgggtatgggagtccccccatgtcca
gtggcaaacctggaggcagcaaggatgcggcaagagaccctggcccccagctccagtgcc
agggctgtgctcctggaggggccaggacaaggcaggcctcccgggagccctcaggtggag
gccatgctgcgggaactgggggagctgtgggaggacctgcagaggaggcaccaggagaat
ggcgtggtgctgcaagaaatcgataaggccctgaggctggtgggggagctggaccaggct
gagcggtggctgcaagatgtggctgggttgctcgtggagcccgctgccatgagaagccca
gcggagctgcgccaggacctggaagaaatgagccggctggagaagcagctcctgctctgt
ggcctcaagctgcaggcactgcgggaagaagcagcaggcgaggtgcccactgagcacgag
ggggcaaggaagatgcagaggaaagtggagatggtggaggagaagttggcacacgtgcag
gcagccctgcggcaccgggcagcagatctgagggactccctggtgctgtctgagttcctg
caggacctgcaagaggaggaggcacggagccagcagggatctgcagcgccagggagtggg
cgttgtggctcgcagggctgttttcccctgctctcagcccaggctgagaagtctccaagc
agtgaggacatgagccggcccttgggagagctgcaggaggccgtggagatgctgaatgac
gcggcgaaggagcgggagcgggtcatggaggtggcagcagagacggagagcctggagcat
ctggtggcaaagatgtccccacagctggaggcccttcagtgcagagccaaggcgctgtct
gaggacattgccctagcagagaagagcttcaccacagtgaagagtgagaaggacctgcaa
gggctgcagggtttgctaagctgccagcaggagatggagcatgcagcgtcacagaccctg
caagggcagctggaggagctggagagggcagctgcccgcttgcaggagctgtgtcccgct
cggcagtgccccgtcagccgggagctgcaggagactctgtgggcctgggcagggctgcga
gagctgctgcgggagacccggctccgcgtgcagcaggccagccggctccggcacttcttc
aaggattatttagccatgatctcctggactgaagacacacgggctcagatcttctctgaa
agcccaagcagctccagtatctcagagactccatgtgaggagctggagaggagaatcgaa
gagaaactcaaggagtttgaggcactagcagcagcagggcagcagctggtgtctgaggag
cactacctgagtgcaacaataaaggagcgcttggaagagctgcagagcatgctgggctgg
gtgctggtgcgctggcgagcgcagaggcatcagcagcaggatctggggagcagacaggag
gacaggagggagctggagaacctctcaagcacatcccccactggtcaagagcagcatgtc
tcacgtgttccaccccacctggaaagcatccacagcccagtgaagttcatgccctcctcc
ctcctcgagcctgtgcaaagattagagccaaagcttccagagaaaacggccatctcccca
cccacctcacccctctcagatgccccgtcaggagtggagcagagctggggggaacccagc
agcaaaacagacggtgatgtggaatcccccaaggaggctggcacctgggatcctgctgag
acctccacgctgctgctgccaccgcggggcccctgtggtctcgggggcacggtcaacctc
atcctcagcattggcaagaagggcgagaagaagaaggcacagctgctggccagcagcgag
cggccaggcgaggaggcactgccagcggtgcaggtggaggccaggaaaacctgcaccgca
aagcggccgcccgctgctgtccggcgccctgcagcagccagcggtgggatggcggctgtg
tcccacaccctgcccaaggccggcgctggctgtctcttccacagcctgcagcggcgcgag
caggccagggcagagcaggcccggctgctgactctgcggggcatcatgggcgacagctcc
ctgcggcccacgcctgaggaatgccacggccccagcaacacgtggccccagaagtgtggc
tggaggaagggcgggccgggggcagctgctgctggacctcagcttggggagctgctcctc
tacgtcaggaacccgctggtgcaggacatcgatgccgagtgcggggcagcccctcagaag
ccctgcctccctcaccccaaaatcacatgcccccgtgtttccctgggctccgtgctcagc
cttgagctgccacgggatgcagtggtcctgggatgccaccgaggggctgaggcacggcag
caggaggcagaggggaaggagcagaggcaggatcaaggggtgaggccatggaagccctca
ggcacacatggagttggatggcaggaagataggcacagtccccaggggcccagcaagagg
ctggggatgtcccccaagagcgagcaagaaacgtggtttgaggaggtgagcttcaagccc
agctacagccagcaaagagcacaccgtgctgggaaggagcaccggaacccgcagcagcct
ggcagcaccagtaaagaccttctggacctgaggccgagccggccggcccgtgtcggcatg
ggggacgagctggccacccgctttggccaggatgacagccccactgcctctggcagggcc
aggcatcacagagccgcttggctagagcttggatcatcccctgccagcaccccaggcagg
gctggagccatccccagccctgcctgcgcacagcagccagccagcagcagccagcccaga
gggtccccggcttcccctgccgcccccacccagctctctgtctttgagtgggcactgggg
tctccacagccccagagccctgcactgggcactaaggaagtttgccaccctgcccacagg
cagtttgaggaagaggaggaggagctgcaggccatctgggatggggcacacgagcgaggg
gcacagagctcgccaggaggcagctgtgccagccacaggacgggcagcagggcaggcagc
ttgcccagccccagtgccacagccggcgggcccctcatcctctcatcagccaacaacgtg
ctggtggccaagttcacccttcccactgctgctcagctgctccacagcccatcgggagcg
cagagccccagcgtggtgcacagtagcagtggcagtcccagtgggctcagggtttccccc
cacgtggagcagctggtgtctgcagcccccttggatgcctccagtgcctgggatcaacgg
aggcatcagcaagaggagagagaaaacagcaaggtcctgcctggtaaaatggagtttcag
atgatggagggtacgctggaaaggaagcatgtattacagacaggagggagaaaggccagc
tgccggacctggggcctcttccacgccgtgctgatgaggcagacactgtgcttctaccag
gaccgcagggacagcctcaagagctccgtggtggcccttcccctgaacctctccggggca
gtctgcaccccagatgctgagtacaccaagaagaccaactgcttcaggctccagctgcag
gatggctctgaatacctcctaagggcccccacccagcccctcatgaacgaatgggtctca
aagctgcagcaaaactcaggtttccccaaagtggattacttccaggcagcagcacagtgt
gtcgagggcactggtggtactggcagtttcagcaaggtctccagccctgggatctcccac
ctccagggacatcatcaggtcaccagcaccaagagccaggagattgtggtgttaccctgt
gcaagcccactactgcagcggcctctgggcagccaggatggcccagtcgatgggactgtg
acagcagcagagaatgctcaggggactgggcacaaggagcagcagtggtcatccagggca
tcccccgggctgtgggacaacatctgcccagaggatgactatgggctggtggccaacaag
aggaggtcctactccttcacatcagccacctaccagaagatcagcccgctggctgtgccc
caggagccggcggaggcgggcagcagttactcggtcacactgtacataggagagcaggtg
tcggccgtgccccgggcacgctgccactccttcgtggccccaacagggagcccccgtgac
acgcgaggggagaagaccaccagcccccctcgcaccaagaacaaatctgtcttcaagaag
ttctttgggaagaaagagtga
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integrated database retrieval system
