| Entry |
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| Symbol |
COL13A1
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| Name |
(RefSeq) collagen alpha-1(XIII) chain isoform X1
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| KO |
| K16617 | collagen type XIII alpha |
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| Organism |
scan Serinus canaria (common canary)
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| Brite |
KEGG Orthology (KO) [BR:scan00001]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:scan00536]
108963412 (COL13A1)
Glycosaminoglycan binding proteins [BR:scan00536]
Heparan sulfate / Heparin
Extracellular matrix molecules
108963412 (COL13A1)
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| SSDB |
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| Motif |
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| Other DBs |
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| LinkDB |
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| Position |
Unknown
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| AA seq |
736 aa
MLEEKSWKGVDEAAFDRGCVAPPRSGDGERCCRLPLLLGSGLPGVSLLSLVLSLLLYFRT
SDLQSRVSHLEADRPTQLPAWLSADQMETAILGRVDQLLNEKLKFHLPRHREVRDTHQRC
NCPAGPPGDKGAMGIPGRPGLKGQSGEKGAPGEAGMSIIGPRGPPGQPGTRGFPGFPGPI
GLDGKPGHPGQKGEMGAAGPRGQPGPPGQKGEKGQCAEYPHREYLSTTLAALRSNQILTL
KGEQGQAGIQGPPGPPGPPGPPGPAGPEGIPGRPGPVGPPGRAGEPGKPGRDGKGLPGPP
GPKGDTGIQGYPGRKGAPGVAAAGMKGEPGTPGEKGDSGVPGRMGPPGLPGKRGQRGEKG
RAGDPGIPGLPGPKGEKGIAENALVGAKGEPGPPGLPGPPGPKGEAGDIGQPGAAGSQGE
KGERGSPGDQGPVGPRGPKGEPGKDEMMDYDGNISEALQEIRTLALMGPPGRPGVAGPPG
PPGQKGEIGLPGPPGHDGEKGPRGKPGEMGPPGPQGLPGKDGPAGMKGEPGHAGGRGEKG
EKGDPGQAGSPGLDGPTGEKGEQGDQGIPGPSGLPGPIGLPGLTVSGPPGPQGPPGPPGL
QGVPGPKGEAGIDGVKGEKGAQGEKGDRGPLGLPGASGLDGRPGPAGIPGPIGASGPAGP
KGERGSKGDPGVAGPMGPAGLPGLQGLPGDKGVRGERGKKGSRGSKGDKGDQGAPGLDAP
CPLGEDGLPVQGCWNK |
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| NT seq |
2211 nt +upstreamnt +downstreamnt
atgttggaggagaagagctggaaaggcgtcgacgaagcagcttttgacagggggtgtgtg
gctccccccaggagcggcgatggggagagatgctgccgcctccctctcctgctgggctcg
gggctgcccggcgtgtccctgctctctctggtgctcagcctcctgctgtactttcggacc
tccgatctgcagtcccgcgtgtcccacttggaagcggacagacccacacagctccctgcc
tggctctcagcagaccaaatggagacagctattttgggaagagttgaccaactgctcaat
gagaaattaaagttccacttgccaagacatcgagaagttcgagacacacaccagcgatgc
aactgcccggcaggtccacctggggacaaaggtgcgatgggaatccctgggcggccggga
ctaaaggggcaatctggagagaagggtgctccaggagaagctggcatgtccatcatcggc
ccccgtggtccacccggacagcctggaacaagaggttttcctggattcccgggccctatt
ggcttggatggcaaaccggggcatcctggacagaagggagagatgggtgctgcaggtccc
aggggacaacctggacccccaggacaaaaaggagagaagggtcagtgtgcagagtacccg
cacagggagtacctaagtaccacacttgcagccctgcgctctaaccagatccttacgctg
aagggtgaacaaggacaggcggggatccaaggtcccccggggccccctggtccaccaggg
ccccctggaccagctggacccgaaggaatcccaggacgtcctgggccagttggaccccct
ggcagagcaggagaacctggaaagcctggcagagatggaaagggcttacctgggcctcct
ggaccaaagggggacactgggattcagggataccctggcagaaagggcgctcccggggtg
gcggccgcagggatgaagggcgagcctgggactccaggagaaaagggagattctggagtg
ccagggaggatgggccccccaggtttgccagggaagagggggcagcggggtgagaaggga
cgagctggtgaccctggaattcctggacttcctggcccaaagggagagaagggaattgct
gagaatgccttggtgggagctaaaggagaacctggccctccaggtctgcctggaccccct
ggaccaaagggagaagcaggtgacattggtcagcctggtgctgcaggatcccagggagaa
aagggggaacgtggttcaccaggagaccagggacccgtgggcccaaggggccccaaagga
gagcctggcaaggatgaaatgatggactatgatgggaacatcagtgaagctctccaggaa
atacgaactttggctttgatgggacccccaggacgtccaggtgtggctggacctccaggg
ccaccaggacagaagggtgaaattggcttgccaggtcctccaggccacgatggagaaaag
ggaccacgtggcaagcctggagaaatgggccctcctgggcctcagggcctgccagggaag
gatggacctgctgggatgaagggagaaccaggccatgctgggggcagaggagagaagggt
gagaagggagatccaggacaagcaggctccccgggtctggatggccccactggagagaag
ggcgaacaaggtgaccaagggataccaggaccatcaggattgccagggcccattggactt
ccaggattgacagtgtctgggccccctggaccccagggccctccaggacctccaggtctt
cagggtgtcccaggacccaagggggaagcagggattgatggagtgaaaggagagaagggt
gcccagggtgaaaaaggagacagagggccactgggattacccggtgcttcaggtttagac
ggcaggcctggaccagcgggtattccaggaccaattggggcttcgggaccagcaggacca
aaaggagagaggggcagtaaaggagatcctggagttgcaggaccaatggggccagcaggg
cttcctggtttacaaggcctacctggtgacaagggagtccggggggagaggggcaagaaa
ggctctagagggtctaaaggggataagggagaccaaggagcacctggattagatgcaccc
tgtccgttgggagaagatggccttccagttcaaggctgctggaataagtga |
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