Serinus canaria (common canary): 108963412
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Entry
108963412 CDS
T05755
Symbol
COL13A1
Name
(RefSeq) collagen alpha-1(XIII) chain isoform X1
KO
K16617
collagen type XIII alpha
Organism
scan
Serinus canaria (common canary)
Brite
KEGG Orthology (KO) [BR:
scan00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
scan00536
]
108963412 (COL13A1)
Glycosaminoglycan binding proteins [BR:
scan00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
108963412 (COL13A1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
Motif
Other DBs
NCBI-GeneID:
108963412
NCBI-ProteinID:
XP_018779473
LinkDB
All DBs
Position
Unknown
AA seq
736 aa
AA seq
DB search
MLEEKSWKGVDEAAFDRGCVAPPRSGDGERCCRLPLLLGSGLPGVSLLSLVLSLLLYFRT
SDLQSRVSHLEADRPTQLPAWLSADQMETAILGRVDQLLNEKLKFHLPRHREVRDTHQRC
NCPAGPPGDKGAMGIPGRPGLKGQSGEKGAPGEAGMSIIGPRGPPGQPGTRGFPGFPGPI
GLDGKPGHPGQKGEMGAAGPRGQPGPPGQKGEKGQCAEYPHREYLSTTLAALRSNQILTL
KGEQGQAGIQGPPGPPGPPGPPGPAGPEGIPGRPGPVGPPGRAGEPGKPGRDGKGLPGPP
GPKGDTGIQGYPGRKGAPGVAAAGMKGEPGTPGEKGDSGVPGRMGPPGLPGKRGQRGEKG
RAGDPGIPGLPGPKGEKGIAENALVGAKGEPGPPGLPGPPGPKGEAGDIGQPGAAGSQGE
KGERGSPGDQGPVGPRGPKGEPGKDEMMDYDGNISEALQEIRTLALMGPPGRPGVAGPPG
PPGQKGEIGLPGPPGHDGEKGPRGKPGEMGPPGPQGLPGKDGPAGMKGEPGHAGGRGEKG
EKGDPGQAGSPGLDGPTGEKGEQGDQGIPGPSGLPGPIGLPGLTVSGPPGPQGPPGPPGL
QGVPGPKGEAGIDGVKGEKGAQGEKGDRGPLGLPGASGLDGRPGPAGIPGPIGASGPAGP
KGERGSKGDPGVAGPMGPAGLPGLQGLPGDKGVRGERGKKGSRGSKGDKGDQGAPGLDAP
CPLGEDGLPVQGCWNK
NT seq
2211 nt
NT seq
+upstream
nt +downstream
nt
atgttggaggagaagagctggaaaggcgtcgacgaagcagcttttgacagggggtgtgtg
gctccccccaggagcggcgatggggagagatgctgccgcctccctctcctgctgggctcg
gggctgcccggcgtgtccctgctctctctggtgctcagcctcctgctgtactttcggacc
tccgatctgcagtcccgcgtgtcccacttggaagcggacagacccacacagctccctgcc
tggctctcagcagaccaaatggagacagctattttgggaagagttgaccaactgctcaat
gagaaattaaagttccacttgccaagacatcgagaagttcgagacacacaccagcgatgc
aactgcccggcaggtccacctggggacaaaggtgcgatgggaatccctgggcggccggga
ctaaaggggcaatctggagagaagggtgctccaggagaagctggcatgtccatcatcggc
ccccgtggtccacccggacagcctggaacaagaggttttcctggattcccgggccctatt
ggcttggatggcaaaccggggcatcctggacagaagggagagatgggtgctgcaggtccc
aggggacaacctggacccccaggacaaaaaggagagaagggtcagtgtgcagagtacccg
cacagggagtacctaagtaccacacttgcagccctgcgctctaaccagatccttacgctg
aagggtgaacaaggacaggcggggatccaaggtcccccggggccccctggtccaccaggg
ccccctggaccagctggacccgaaggaatcccaggacgtcctgggccagttggaccccct
ggcagagcaggagaacctggaaagcctggcagagatggaaagggcttacctgggcctcct
ggaccaaagggggacactgggattcagggataccctggcagaaagggcgctcccggggtg
gcggccgcagggatgaagggcgagcctgggactccaggagaaaagggagattctggagtg
ccagggaggatgggccccccaggtttgccagggaagagggggcagcggggtgagaaggga
cgagctggtgaccctggaattcctggacttcctggcccaaagggagagaagggaattgct
gagaatgccttggtgggagctaaaggagaacctggccctccaggtctgcctggaccccct
ggaccaaagggagaagcaggtgacattggtcagcctggtgctgcaggatcccagggagaa
aagggggaacgtggttcaccaggagaccagggacccgtgggcccaaggggccccaaagga
gagcctggcaaggatgaaatgatggactatgatgggaacatcagtgaagctctccaggaa
atacgaactttggctttgatgggacccccaggacgtccaggtgtggctggacctccaggg
ccaccaggacagaagggtgaaattggcttgccaggtcctccaggccacgatggagaaaag
ggaccacgtggcaagcctggagaaatgggccctcctgggcctcagggcctgccagggaag
gatggacctgctgggatgaagggagaaccaggccatgctgggggcagaggagagaagggt
gagaagggagatccaggacaagcaggctccccgggtctggatggccccactggagagaag
ggcgaacaaggtgaccaagggataccaggaccatcaggattgccagggcccattggactt
ccaggattgacagtgtctgggccccctggaccccagggccctccaggacctccaggtctt
cagggtgtcccaggacccaagggggaagcagggattgatggagtgaaaggagagaagggt
gcccagggtgaaaaaggagacagagggccactgggattacccggtgcttcaggtttagac
ggcaggcctggaccagcgggtattccaggaccaattggggcttcgggaccagcaggacca
aaaggagagaggggcagtaaaggagatcctggagttgcaggaccaatggggccagcaggg
cttcctggtttacaaggcctacctggtgacaagggagtccggggggagaggggcaagaaa
ggctctagagggtctaaaggggataagggagaccaaggagcacctggattagatgcaccc
tgtccgttgggagaagatggccttccagttcaaggctgctggaataagtga
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