Serinus canaria (common canary): 108963869
Help
Entry
108963869 CDS
T05755
Symbol
SYVN1
Name
(RefSeq) LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase synoviolin
KO
K10601
E3 ubiquitin-protein ligase synoviolin [EC:
2.3.2.27
]
Organism
scan
Serinus canaria (common canary)
Pathway
scan04120
Ubiquitin mediated proteolysis
scan04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
scan00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
108963869 (SYVN1)
04120 Ubiquitin mediated proteolysis
108963869 (SYVN1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
scan04121
]
108963869 (SYVN1)
Enzymes [BR:
scan01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
108963869 (SYVN1)
Ubiquitin system [BR:
scan04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
108963869 (SYVN1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HAT_PRP39_C
zf-RING_2
zf-rbx1
zf-C3HC4
zf-C3HC4_2
zf-RING_UBOX
TPR_14
zf-C3HC4_3
zf-RING_16
zf-RING_11
zf-RING_5
zf-ANAPC11
TPR_16
zf-RING-like
zf-HC5HC2H
zf-Nse
Endonuclease_7
zf-C3H2C3
Motif
Other DBs
NCBI-GeneID:
108963869
NCBI-ProteinID:
XP_030097374
LinkDB
All DBs
Position
Unknown
AA seq
707 aa
AA seq
DB search
MWIILGLNPCFLGFQAEAMLCTALVMAGSLALTTAVVAHAYYLKHQFYPTVVYLTKSSPS
MAVLYIQAFVLVFLLGKFMGKVFFGQLRAAEMEHLLERSWYAVTETCLAFTVFRDDFSPR
FVALFTLLLFLKCFHWLAEDRVDFMERSPNISWLFHFRIVSLMFLLGILDFLFVSHAYHS
ILTRGASVQLVFGFEYAILMTMVLTIFIKYVLHSIDLQNENPWDNKAVFMLYTELFTGLI
KVLLYMAFMTIMIKVHTFPLFAIRPMYLAMRQFKKAVTDAIMSRRAIRNMNTLYPDATAE
ELQAMDNVCIICREEMVTGAKRLPCNHIFHTSCLRSWFQRQQTCPTCRMDVLRASLPPQP
PPEPPAPAPAPQNEAEVSKRWKLRGWAGAAAELARVPGLGGGGGLARAQHRPLRALPHRL
RLYEEFWVKYTRYLESRTVPGARSVFQRPAASHLPRKPNIHLWAAFEEKQGNVDEARRIL
RSFEAAVPGLAMVRLRRVSLERRHGRVAEAEALLLEAMRXQRGAAPGSFYAVKLXRQVCK
VQKNLGKARKVLVEALEKDPVRGRTPLHANLLEMEFGADVGQNEGNTISCFERALRSPLP
DEAKLLFSQRRVEFLEDFGSSIHSLLKAYDEHQKILKAHAARKRAPENGSEEPDDKRLRP
DDPSGLLGPLNFSGGDPNPSYNYWYQHGYGTYGYQSPWGYSHYYGQS
NT seq
2124 nt
NT seq
+upstream
nt +downstream
nt
atgtggattattttggggttaaatccctgttttttggggttccaggccgaggccatgctg
tgcacggcgctggtcatggccggcagcctggcgctcaccacggccgtggtggcccacgcc
tactacctgaagcaccagttctaccccaccgtggtttacctgaccaagtccagccccagc
atggccgtgttgtacatccaggccttcgtgctggtgttcctgctgggcaagttcatgggc
aaggtgttcttcgggcagctgcgggcggccgagatggagcaccttctggagcgctcgtgg
tacgcggtgaccgagacctgcctggccttcaccgtcttcagggacgacttcagcccgcgc
ttcgtcgccctcttcaccctcctcctcttcctcaagtgcttccactggctggccgaggac
cgggtggattttatggagaggagccccaacatctcgtggctcttccacttccgcatcgtc
tccctgatgttcctgctgggaatcttggacttcctctttgtcagccacgcctaccacagc
atcctgacccgcggcgcctccgtccagctggtcttcggcttcgagtacgccatcctgatg
accatggtgctgaccatcttcatcaagtacgtgctgcactccatcgacctgcagaacgag
aacccctgggacaacaaggccgtgttcatgctctacaccgagctcttcaccgggctgatc
aaggtgctgctctacatggccttcatgaccatcatgatcaaggtgcacaccttcccgctc
ttcgccatccgccccatgtacctggccatgaggcagttcaagaaggccgtcaccgacgcc
atcatgtcccgccgggccatccgcaacatgaacacgctgtatcccgacgccacggccgag
gagctgcaggccatggacaacgtgtgcatcatctgccgtgaggagatggtgacgggcgcc
aagcgcctgccctgcaaccacatcttccacaccagctgcctgcgctcgtggttccagcgg
cagcagacgtgccccacgtgccgcatggacgtgctgcgcgcctcgctgcccccgcagccg
cccccggagccaccggcaccggcaccggccccccagaacgaggccgaagtcagcaaacgc
tggaaacttcgaggatgggcgggcgcagctgcggaactggcgcgagtacctggactggga
ggtggcggcgggctcgcacgagcgcagcatcgtcctcttcgagcgctgcctcatcgcctg
cgcctctacgaggagttctgggtcaagtacacgcggtacctggagtcccgcacggtgccg
ggcgcccgcagcgttttccagcgccctgcggcttcacacctgccccgcaagcccaacatc
cacctctgggctgccttcgaggagaagcaaggcaatgtggacgaggcccggcgcatcctg
cgcagtttcgaggcggcggtgcccggcctggccatggtgcgcctgcgccgggtcagcctg
gagcgccggcacgggcgcgtggccgaggccgaggcgctgctgctcgaggccatgaggngc
caacgaggggctgcccctggctccttctacgccgtcaagctgngccggcaggtgtgcaag
gtgcagaagaacctgggcaaggcccgcaaggtgctggtggaggccctggagaaggacccg
gtgagggggagaacgccgctccacgccaacctgctggagatggagtttggggcggacgtg
gggcagaacgagggcaacaccatcagctgcttcgagcgcgccctgcgcagccccctgcca
gacgaggccaagctgctcttctcgcagcgccgcgtcgagttcctcgaggacttcggctcc
agcatccacagcctgctcaaggcctacgatgagcaccagaagatcctgaaggcgcacgcg
gcccggaaacgggcacccgagaatggctcagaagaacctgacgacaaacggctccgaccc
gacgacccctcggggctcctgggacccctcaacttctcagggggggaccccaacccctcc
tacaactactggtaccagcacggctacggcacctacggctaccagagcccctggggctac
agccactactacgggcagagctga
DBGET
integrated database retrieval system
