Serinus canaria (common canary): 115483849
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Entry
115483849 CDS
T05755
Name
(RefSeq) LOW QUALITY PROTEIN: laminin subunit beta-1-like
KO
K06243
laminin, beta 2
Organism
scan
Serinus canaria (common canary)
Pathway
scan04510
Focal adhesion
scan04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
scan00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
115483849
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
115483849
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Laminin_EGF
Laminin_N
LAMININ_IV_B
F5_F8_type_C
Ferritin
Alanine_zipper
Motif
Other DBs
NCBI-GeneID:
115483849
NCBI-ProteinID:
XP_030083909
LinkDB
All DBs
Position
Unknown
AA seq
1832 aa
AA seq
DB search
MDLLTLAFLLVRGLVAGGWQEPDLSHGCARGSCYPATGNLLVGRATHLSATSTCGLDGPQ
EYCIVSHLQDSEKCFTCDSRDPSLPESHRIENVIYLSSPHDKRTWWQSENGVEHVSIRLD
LEGEFHFTHLIMKFKTFRPAAMLVERSADFGRTWKVYRYFAYNCSKLFPGIPSHPLGLVD
EVLCDQRYSEIEPSSHGEVIFKVLDPSIPVADPYSPDIQDLLRVTNLRVNLTKLHTLGDN
LLDSRREVLHKYYYAVDELVLRGSCFCHGHAAHCAPAPGAPTPSVPGMIHGRCVCEHHTQ
GLNCERCEDFYHDLPWRPAKGSSTNACRRCDCNEHSRRCHFDMAVFLATGNTSGAVCDDC
QHNTMGRHCHLCKPFYYRHPRSDIRSPTACAPCDCDPAGSLDGGACDGHTDVALGMIAGQ
CRCKENVAGPRCDRCRHGTYGLSNGDPQGCQPCRCDPRGTVAGSSPCDPISGDCYCKRFV
AGRSCSQCVPEFWGLSYDLGGCRPCACDFGGAYNNRCSMEDGACPCRPHIMGRQCDQVQP
GFFCAPLDYYTYEAEQATGHGHSHPQLPGAIRVEVPQDCLEYDTREPAGRKGRSRHQHSP
LRPPQPPVPSRRGRQQPPKLDVEEVVRDSAGRMVTWTGLGFARVRDGAGLTFRVDNVPYP
MDYELLLRYEPESAEDWEAVVSVSSRVLPTSSRCGNLLPSEQMYRESLPHSQRYVLLSRP
FCFEPSTPYEVTMRLQRAGVTQRHPGAFILIDSLVLLPRVSELPGFHGAEAAVRQEELER
YQCLEVFRMAPPHPLAEACARLVCSVSALMHGGALPCQCDPQGSRSSECQVQGGQCECKP
HVIGRRCDHCAPGSFGFGPLGCSPCTCSPEGSVSQLCDKVSGQCQCQAGTVGRQCDQCQP
GHWGFPVCRPCQCNGHAEECDPRTGTCLHCRDHTSGRHCERCQDGYYGNPVLGSGQQCRP
CPCPGYPGTRHYHGSACHADDETHHIVCLCAPGYAGPRCDRCSPGYFGAPXDGGGECRPC
QCNNNIDTSDPEGCDPRTGQCLRCLYHTAGPRCAHCQLGYYGNALQRSCRRCGCDPRGTL
ASHCTNGTCDCDRGTGACACRPNVVGKSCDRCAPHFWSLGGPRGCEPCGCHPTHALHPAC
DTVTGQCQCRPGFGGRVCSQCQEHHWGDPEQECRACECEPLGAESPQCEQDNGQCRCRLG
FGGLRCDRCQRGYQEPFPQCSPCHPCFERWDLAVGSLREGLQRLGAQVQALREGGSALPL
SPRRLWELEEALGHVEQLLGEGHSPGSPLLNGLPRQLGSTRMELDSFGKHLQELEQHLDQ
LAQADMQHHDRLAELSRELGGLNRTTSHLQILLGTVAAAGFSECYRSILASTEASRQAEV
VANGTAGELRRAQVTQRATERVLQQRGDTFRRSTAAARKSLRETQKRVMGLNIARINEKI
CGAPGDRSCKHASCGGALCRDSAGTRHCGGTGCAGALPVSARALSSAHNASQQLEVALGQ
LGVVAQKPGAPQMQEVQELARGARSRAEEALGRSQAARSRAEKATAQLRDFIRRIKAFLA
EEGADPGSIELVARQVLNISLPSSPGQIQELLWEMRESISQLEGVDAVLNSTVEGLAVAR
DLLAKGQEARERAEGIRDELAEIQQALEVARTQAMTAGSTLQSARDAIQVAENRAREAER
RLQVLDRKESQAQRRLRGLAQRITTLQEHGRDAHHMAQQAKDGAQRATITSGTLSQDLAQ
VTQRYVVLKNRVGMLDRVSGGALQRVSQLMAEAQDLLDKASNSKRKLEDLEQRFGTNERM
MAAKVTRLQALEQQVTGLLQEIRERANAYATC
NT seq
5499 nt
NT seq
+upstream
nt +downstream
nt
atggacctcttgacgcttgctttcctcctggtcaggggactggtggctgggggctggcag
gagcctgacctgagccacggctgcgcccgtggcagctgctacccagccactgggaacctg
ctggtggggcgagccacccacctgagtgccacctccacctgtgggctggatgggccccag
gagtactgcatcgtcagccacctccaggactcggagaaatgtttcacctgtgactcacgt
gacccatccctgcctgagagccaccgcattgagaatgtaatttacctgagcagcccccat
gacaaacggacctggtggcagtcagagaatggtgtggagcatgtcagcatccgcctggac
ctggagggcgagttccacttcacccacctcatcatgaagtttaaaaccttccgccccgcg
gccatgctggtggagcgctcagccgactttgggcgcacctggaaggtgtaccgctacttt
gcctacaactgctccaagctcttccctggaatccccagccaccccctggggcttgtggat
gaggtgctgtgtgaccagcgctactctgagattgagccgtccagccatggggaggtcatc
ttcaaggtgctggacccctccatccccgtagcagatccctacagcccagatatccaggac
ctgcttcgtgtcaccaacctgcgggtgaacctcaccaagctgcacactctgggggacaac
ctgctggactcacggagggaggtgctgcacaagtactactacgctgtggatgaactggtg
ctgcgtgggagctgcttctgccatggccacgctgcccactgtgccccagcaccgggtgcc
ccaacaccctctgtccctggcatgatccatgggcgctgtgtctgtgagcaccacacgcag
gggctgaactgtgaacgctgcgaggatttctaccacgacctgccctggcgcccggccaag
ggctccagcaccaatgcctgtcgccgctgtgactgcaacgagcactcacggcggtgccac
tttgacatggctgtgttcctggccacggggaacaccagtggggctgtatgtgatgactgc
cagcacaacaccatgggccgtcactgccacctctgcaagcccttctactaccggcaccct
cgctctgacatccggtcccccactgcctgtgccccgtgtgattgtgacccagcaggctcg
ctggatggaggtgcctgcgacgggcacacagacgtggcgctgggcatgattgcggggcag
tgccgctgcaaggagaacgtggccggcccccgctgtgaccgctgccggcacggcacctat
ggcctcagcaacggcgacccacagggctgtcagccatgcaggtgtgacccgcggggtaca
gtggcaggcagttccccatgtgaccccatcagtggggactgctactgcaaacgcttcgtg
gctgggcgttcctgcagccaatgtgtgcccgagttctggggtctgagctacgacctgggg
ggatgccggccctgcgcctgcgacttcgggggagcctacaacaaccggtgctccatggag
gatggggcatgtccctgccgtccccacatcatggggcggcaatgtgaccaggtacaaccc
ggcttcttctgtgcccccctcgactactacacctatgaggccgagcaggccaccggccat
ggccacagccaccctcagctcccgggtgccattcgggtggaggtgccccaggactgcctg
gagtatgacaccagggagccggcggggcggaagggacgctcacggcatcagcacagcccc
ctccgtcctccccagccccctgtaccctcgcgccgcggccgccagcagccccccaagctg
gatgtggaggaggtggtgcgggacagtgccgggcgcatggtgacgtggacaggcttgggg
ttcgcccgggtgcgggacggggctggcctgacattccgcgtggacaacgtgccctacccc
atggactacgagctgctgctgcgctacgagcccgagtcagccgaggactgggaggccgtg
gtcagtgtcagctcccgggtgctgcccaccagctctcgctgtgggaacctgctgccctcc
gagcagatgtaccgcgagagtctgccccacagccagaggtacgtgctgctgtcccggccc
ttctgcttcgagcccagcaccccctatgaggtgaccatgcggcttcagcgggctggtgtc
acccagcgccaccctggtgccttcatcctcattgactcgttggtgctcctgccacgggtg
tcagagttgccagggttccatggggcagaggcagcagtgcgccaggaggagctggagcgg
taccagtgcctggaggtgtttcgcatggccccccctcaccccctggctgaggcctgtgcc
cgcctggtctgcagcgtctcagccctgatgcacggcggggcactaccctgccagtgcgac
ccacagggctcccgcagcagcgagtgccaggtgcaaggcgggcagtgtgagtgcaagccc
cacgtcattggccgacgctgcgaccactgtgccccaggcagcttcggctttgggcccctg
ggatgcagcccctgcacctgctccccagagggctcggtgtcccagctgtgtgacaaggtg
agcgggcagtgccagtgccaggccggcactgtgggccggcagtgtgaccagtgccagccc
ggccactggggcttccctgtctgccggccctgccagtgcaacgggcatgccgaggagtgt
gatccccggacgggcacctgcctgcactgccgcgaccacacgagcggccggcactgtgag
aggtgccaggatggttactatgggaaccctgtgctgggctcggggcagcagtgccggccc
tgcccctgccctggctaccctggcacacggcattaccatgggagcgcctgccatgcggac
gatgagacacaccacatcgtctgcctctgcgcccctggatacgcggggccccgctgcgac
cgctgctcccctggttactttggggctccangagatggagggggggagtgccggccctgc
cagtgcaacaacaacatcgacaccagcgacccagagggctgcgacccccgcacgggacag
tgcctgcgctgcctgtaccacacggctgggcctcgctgtgcccactgccagctgggctac
tatggcaatgccctgcagcgcagctgccggcgctgtggctgtgacccacggggcacactg
gcctcccactgcaccaatggcacctgcgactgtgaccgtggcacaggagcctgtgcctgc
cggcccaatgtcgtgggcaagagctgtgatcgctgcgcaccccacttctggagcctgggg
gggccaaggggctgtgagccctgtggctgccaccccacacatgccctgcaccctgcctgt
gacacagtgacagggcagtgccagtgccggcctggcttcgggggtcgtgtctgttcccag
tgccaggagcaccactggggagaccctgagcaggagtgccgagcctgtgagtgtgagccg
ctgggtgctgagagcccacagtgcgagcaggacaacgggcagtgccgctgccggctggga
ttcggggggctgcgctgtgaccgctgccagcggggctaccaggagcccttcccccagtgc
tcaccctgccacccttgcttcgagcgctgggacctggccgtgggcagcctgcgggaaggg
ctgcagcgcctcggggcacaggtgcaggcactgagggaggggggctctgcactcccactc
agcccccgtcgcctgtgggagctggaggaggctctggggcacgtggaacagctgctggga
gaggggcacagccctggtagtcccctcctcaatggactgcccaggcagctgggtagcacc
aggatggagctggacagctttgggaagcacctccaagagttggagcaacatctagaccag
ctggcgcaggcggatatgcagcaccatgaccggctagctgagctgagccgtgagctggga
ggtctcaaccgaaccacctcccaccttcagatcctcctcggcactgtagcggcagccgga
ttcagcgagtgttaccgcagcatcctggcatcgacggaggcctcgcggcaggcggaggtg
gtggccaatggcacagctggcgagttaaggagggcgcaggtgacgcagcgggcgactgag
cgggtgctgcagcagcggggcgatactttccgccgtagcacagccgcagcccggaaatca
ttgcgggagacacaaaaacgggtgatgggactcaacattgccaggatcaacgagaagatt
tgtggggcacccggagaccggagctgcaagcacgcatcttgcggaggagccttgtgccga
gacagtgcggggacaaggcattgcggtggcactgggtgtgcaggggcactgcctgtctca
gctcgagccctcagcagtgctcataatgcctcacagcagctggaggtggcattagggcag
ctgggtgttgtggcacagaagccaggtgcccctcagatgcaggaggtgcaggagctggca
cggggggcacgcagcagggcagaggaggcgctggggcgctctcaagccgctcgcagccgt
gcagagaaggcgacggcccagctgcgggacttcatccgccgaatcaaggcctttctggca
gaggagggagctgacccaggcagcattgagctggtggcccggcaggtgctgaacatctcc
ctgcccagcagccctggacagatccaggagctgctgtgggagatgcgggagagcatcagc
cagctagagggggtggatgcagttctcaacagcacagtggaggggctggctgtggcacgg
gatctgctggcaaagggacaggaggccagggagcgagcagaaggcataagggatgagctg
gcggagatacagcaggcactggaggtggcacggacacaggccatgacagcagggagcacc
ctgcagagcgccagggatgccatccaggtggctgagaacagagccagggaggcggagcgc
aggctgcaggtgctggacaggaaggagtctcaggcgcagaggcggctgcgggggctggca
cagcgcatcaccaccctgcaggagcacggccgggatgctcaccacatggcccagcaagcc
aaggatggggcacagcgtgccaccatcacctcggggacgcttagccaggacctggcccag
gtaacacagcgttatgtggtgctgaagaaccgggtgggcatgctggacagggtgtctggt
ggggccctgcagcgtgtgtcgcagctgatggcagaggcccaagacctcctggataaggcc
agcaacagcaagaggaagctggaagacctggagcagcgctttgggaccaatgaacggatg
atggcggcaaaggtgacacgactgcaggctttggagcagcaggtcactgggctgttgcag
gagatccgggagagggccaacgcttacgccacctgctag
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