Serinus canaria (common canary): 115484024
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Entry
115484024 CDS
T05755
Symbol
IRX5
Name
(RefSeq) LOW QUALITY PROTEIN: iroquois-class homeodomain protein IRX-5
KO
K24889
iroquois-class homeodomain protein IRX
Organism
scan
Serinus canaria (common canary)
Brite
KEGG Orthology (KO) [BR:
scan00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
scan03000
]
115484024 (IRX5)
Transcription factors [BR:
scan03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain TALE
115484024 (IRX5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Homeobox_KN
Homeodomain
Motif
Other DBs
NCBI-GeneID:
115484024
NCBI-ProteinID:
XP_030083284
LinkDB
All DBs
Position
Unknown
AA seq
471 aa
AA seq
DB search
MSYPQGYLYQPSASLALYSCPAYSTSVISGPRTDELGRSSSGSAFSPYAGSTAFNAPXPG
YNSHLQYGTDPAAAAAAAFTSYVGSPYDHTPGMAGSLGYHPYAAPLGSYPYGDPAYRKNA
TRDATATLKAWLNEHRKNPYPTKGEKIMLAIITXMTLTQVSTWFANARRRLKKENKMTWT
PRNRSEDEEEEENIDLEKNDEDEPQKLEEKGDPGTPDTGAVDPKAAPGCERLQESPAPXE
AESGLSDSDCKELAEERLDGPPVPTRRPAPRWTVSGGPGPPPAAARXPPPYRPPSAAAGP
PHAADLHPLLPAANGASVIHSPQQAALAKPKLWSLAEIATSADKAKEAGGEAAPPGPXVL
GGSGPSRSPPRPRSPSAQCPFPNGAVLPRPLYYTXPFYPGYTNYGSFGALHGHPAGGPAA
TAPGAHFNGLNQTVLSRAESLAKDTKMIRSQSQVDLCKDSPYELKKGMSNI
NT seq
1416 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtatcctcagggttacttgtaccagccgtcagcgtccttggctctctattcctgc
ccggcgtacagcaccagcgtgatctccggacccaggaccgatgaacttgggagatcttct
tcgggctccgctttttccccttatgccggatctaccgcctttaacgcccctntcccgggt
tacaactcccacctccagtacggcaccgacccggccgccgccgccgccgccgccttcact
tcctacgttggctcgccctacgaccacacgccgggcatggccggttccctggggtaccac
ccgtacgcggcgccgctcggctcctacccctacggggaccctgcgtaccgcaagaacgcg
acgcgggacgccacggccaccctcaaggcctggctcaacgagcaccggaaaaacccctac
cccaccaagggcgagaagatcatgctggccatcatcaccnaaatgaccctcacccaggtc
tctacctggttcgccaacgcgcggcgacggctcaagaaggagaacaaaatgacttggacc
ccacgaaaccgcagcgaggacgaggaggaagaggagaacatcgacctggagaaaaacgac
gaggacgagccccagaaactggaggagaagggggaccccgggactccggacacaggagcg
gtggatcccaaggcagcgccgggctgcgagcgcctccaggagtccccggcccccngggaa
gccgagagcggcctcagcgactcggattgcaaagagctagcggaggaacggctcgacggg
ccgcccgtccccacaaggcgcccggcgccccgctggaccgtgtccggcgggccggggccg
ccgccggcggcggcgaggnagcccccgccgtaccgcccgccctccgccgccgccgggccg
ccgcacgccgccgacctgcacccgctgctgcccgccgccaacggcgcctctgtcatccac
tcgccgcagcaggcggccctcgccaagcccaagctctggtcgttggccgagatcgccacc
tcggcggacaaggcgaaggaggccggcggcgaggcggcgccccccggcccgnccgtgctg
ggcggcagcggcccgtctcgctcgccgccgcggccgcgctcgccctccgcgcagtgcccc
ttccccaacggggcggtcctgccccggccgctctactacacgncgcccttctaccccggc
tacacgaactacggctccttcggggccctgcacgggcaccccgccggcggccccgccgcc
accgcccccggcgcccacttcaatggattaaatcagactgtcctcagcagagccgagagc
ctggctaaagacactaaaatgatcaggagccagtcccaagtagacctttgcaaagactca
ccttacgaactgaagaaaggtatgtccaacatttaa
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