Entry |
|
Symbol |
SOX1
|
Name |
(RefSeq) LOW QUALITY PROTEIN: transcription factor SOX-1
|
KO |
K09267 | transcription factor SOX1/3/14/21 (SOX group B) |
|
Organism |
scan Serinus canaria (common canary)
|
Brite |
KEGG Orthology (KO) [BR:scan00001]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:scan03000]
115484864 (SOX1)
Transcription factors [BR:scan03000]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
115484864 (SOX1)
|
SSDB |
|
Motif |
|
Other DBs |
|
LinkDB |
|
Position |
Unknown
|
AA seq |
367 aa
MYSMMMETDLHSPGGAQAPRPLSGQTXAGGGGGGGGGGXKQANQDRVKRPMNAFHGGRGA
EAEMAHGNPKCTLGDSKRLGPSGNHVEAEKRPFIDEXKRLRALHMKEHPDYNTGPXAETK
TLLKKDKYSLAGGLSAGSAGGGPAGVGVGMGVGVSPGGVGQRLESPGGTASGGYAHMNGW
ANGAYPGSVAAAAAAAAMMQEAQLAYSQHPGSGAPAPPHPHHPHHPHNPQPIHRYDMGAL
QYSPXLQSQGYMSASPSGYGALPYGSQPHQNSAAAAAAAAAAAAASSGALGALGSLVKSE
PSVSPPVTSHSRAPCPGDLREMISMYLPAGEGGDPAAAAAQSRLHSLPQHYQSASTGVNG
TVPLTHI |
NT seq |
1104 nt +upstreamnt +downstreamnt
atgtacagcatgatgatggagacggacttgcactcccctggcggagcccaggccccccga
cccctctcggggcagaccngagcgggaggcggcggaggcggcggcggcggcggtnngaaa
caagcgaaccaggaccgggtcaagagacccatgaacgcctttcatggtggtcgcggggca
gaggcggagatggcccatggaaacccaaaatgcacactcggagatagcaagcgcttgggg
ccgagtggaaatcatgtcgaggccgagaagagaccgttcatcgacgagnggaagcggctg
cgagcgctgcacatgaaggagcacccggattataataccggccccnnggcggaaaccaag
accctgctgaagaaggacaagtactcgctggccgggggcctgagcgccggctcggccggg
ggaggcccggccggcgtcggcgtgggtatgggcgtcggcgtcagcccgggcggcgtcggg
cagcggctagagagccccggcggcacggccagcggcggctacgcgcacatgaacggctgg
gccaacggcgcctacccgggttcggtggcggcggcggcggcggcggcggcgatgatgcag
gaggcgcagctcgcctacagccagcacccgggcagcggggcacccgcaccaccccaccca
caccacccgcaccacccgcacaacccgcagcccattcaccgctacgacatgggtgccctg
cagtacagccccnntctccaatcgcagggctacatgagcgcctcgccctcgggttacggc
gccctgccctacggctcccagccccaccagaactcggcggcggcggcggcggcagcggca
gcggcggcggccgcctcctcgggtgcgctgggcgccctgggctcgctggtgaagtcggag
cccagcgtgagcccccccgtcacctctcactcgcgggccccgtgccccggggacctgcgg
gagatgatcagcatgtacttaccggccggggaaggcggggatccggcggccgctgccgcc
cagagccggctccactccctgccccagcactaccagagcgccagcacgggggtgaacggc
accgttcccttgacgcatatctga |