KEGG   Serinus canaria (common canary): 115485174
Entry
115485174         CDS       T05755                                 
Name
(RefSeq) collagen alpha-2(I) chain-like
  KO
K19720  collagen type III alpha
Organism
scan  Serinus canaria (common canary)
Pathway
scan04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:scan00001]
 09140 Cellular Processes
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    115485174
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   00536 Glycosaminoglycan binding proteins [BR:scan00536]
    115485174
Glycosaminoglycan binding proteins [BR:scan00536]
 Heparan sulfate / Heparin
  Extracellular matrix molecules
   115485174
SSDB
Motif
Pfam: Collagen
Other DBs
NCBI-GeneID: 115485174
NCBI-ProteinID: XP_030093470
LinkDB
Position
Unknown
AA seq 884 aa
MWGVGGTWVTRGVVGGTTGVFGAPPGCGDPPVPPLTPRLPQRSPPAASPPGGPRPPPPPP
PPAPRIRLRLGGARPGRASPAPPFSWPPHFLPLGTPGRGGGAVGRGLGGARLWAGAAFAV
LGALGALLLLGGRRAGLARLGGLLAASAFARAFPLFFDPYELGGRLPPPAARALFELPFP
CLGWGLALAPPARGAPLLLALGCCTWGGSWGPWGRWRRWGGPRRCCCCPRALFAALAAAL
ALGGLRRCGAGGGRGKRGGGARAGVRGCWGAGAVLSAGLQLFGALQAWGWALTPAPGPWA
WWGLQLGGRLAELAMGGALAALAFAPPRAAAPPRRPPGRGRGPHGRVPAPLPIDLRRSID
EALGAPGMFRAGNGGIGGTGGTGNTRISLVGNAAGTGNGGKTKSNGVSVLGSTGSTEISV
ISAAGSARSAGSTGSTGTGTGTSTSALPGGGSAAMPGLGTGSAGSASGTAGAAAAGGTGT
AGAGTAGTAGTAGKPGTAGTPDTTGKPGTAGTAGTAGTAGTPSTAGSAGKPGTAGAPGTA
GTAGKPGTAGTPGAAATPGTTGKPGTPGTTGKPGTAGTPGAAKTPGTTGKPGTTGKAGTP
GTTGKPGTVGTLAQPENLTQLAPLEHLAQPAHLAQLEHLAQLENLEQPEHLAQPAHWHSW
HSWHSHHPWHNQHTWHSWHSWHSHHPWHNQHTWHSWHSWHSHHTWHSWHGRRDRARHPRP
SQGQQNRGPRNWHCRHLRDGGTGHGPRHTWHTWHTWHPWHAGPCSAWHRWPVRPRLLWPS
WDTGAWRCCPPRCPPRCPPPPRAVPGRLLRGTLRGGSRRCPSARGPSRGGPSPGTPAQGP
PRAAPPPLRPSQSWAEGSPGPGRPPPRPPSPPRAAAAAAPAVTP
NT seq 2655 nt   +upstreamnt  +downstreamnt
atgtggggcgtggggggtacctgggtgacgcggggggtcgtgggaggaacaacgggggtg
ttcggggcgcccccgggatgcggggacccccccgtcccccctctgacgcctcgtctcccg
cagcgctctcccccggccgccagccctcccggggggccgcgcccccccccgccgccgcct
ccgcctgcaccccggatccgcctgcggctcgggggggcccgacccgggcgggcctccccc
gcgccccccttctcgtggcccccccacttcctgccgctgggcacccctggccgaggcggc
ggcgctgtggggcgcggcctggggggggcacgtctatgggcgggggcggccttcgccgtg
ctgggggcgctgggcgcgctgctgctgctgggggggcgccgggcggggctggccaggctg
ggggggctgctggccgcctccgccttcgcccgcgccttcccgctcttcttcgacccctac
gagctgggggggcgcctgccgccccccgccgcccgggcgctgttcgagctgcccttcccg
tgcctgggctgggggctggcgctggcgccccccgcgcggggcgcgccgctgctgctggcg
ctggggtgctgcacctggggggggtcctgggggccgtgggggcgctggcggcgctgggga
ggcccccggcgctgctgctgctgcccccgcgctctgttcgccgcgctggcggccgcgctg
gcgctgggggggctgcggcgctgcggggcgggcggggggcgcggcaagcgcggggggggg
gcgcgggcgggggtccgcggctgctggggggcgggggcggtgctgagcgcggggctgcag
ctcttcggggcgctgcaggcctggggctgggccctgacccccgcccccgggccctgggca
tggtgggggctgcagctgggggggcgcctggccgagctggccatggggggggcgctggcc
gcgctggccttcgcgcccccccgggcggccgcgcccccccggcgtccccctggacgtgga
cggggaccccacggccgggtaccggcccccctccccatcgacctgcgccgctccatcgac
gaggccttgggagcgccgggaatgttccgcgccgggaacggcggcatcgggggcaccggg
ggcaccgggaacaccaggatcagcctcgtagggaacgccgcgggcaccgggaacggtggg
aaaaccaagagcaacggggtcagcgtgctcgggagcaccgggagcaccgagatcagcgtc
atcagcgccgccggcagcgcccgcagcgccggcagcaccgggagcaccggcaccggcacc
ggcaccagcaccagcgccctgccggggggcggcagcgccgccatgccagggctgggcacg
gggagcgccgggagcgcctccggcacagccggggctgcggcagcgggcggcaccggcacc
gcgggggcgggcacggctggcacggccggcacggccggcaaacctggcacggcgggaacg
cctgacacaaccggaaaacctggcacagctggaacagccggcacagctggcacagctgga
acacctagcacagctggctcggctggcaaacctggaacagctggagcacctggaacagca
ggaacagctggcaaacctggcacagccggcacacctggcgcagctgcaacacctggcaca
actggaaaacctggcacacctggcacaactggcaaacctggcacagccggcacacctggc
gcagctaaaacacctggcacaactggaaaacctggcacaactggaaaagctggcacacct
ggcacaactggcaaacctggcacagttggaacactggcacaaccggaaaacctgacacag
ttggcaccactggaacacctggcacaaccagcacacctggcgcagctggaacacctggca
caactggaaaacctggaacagccggaacacctggcacaaccagcacactggcacagctgg
cacagctggcacagccaccacccctggcacaaccagcacacctggcacagctggcacagc
tggcacagccaccacccctggcacaaccagcacacctggcacagctggcacagctggcac
agccaccacacctggcacagctggcacggccggcgggacagagcgaggcacccccggccc
agccagggacagcaaaaccgcggccccaggaattggcactgccggcacctcagggacggg
ggcaccgggcacggcccgcgccacacctggcacacctggcacacctggcacccctggcac
gcagggccctgcagcgcctggcaccgctggcccgtcagaccccggctcctgtggcccagc
tgggacacgggggcctggcgctgctgccccccccggtgccccccccggtgccccccgccc
ccccgggctgtcccgggccgcctcctgcgggggaccctccgggggggatcccggcgctgc
ccctcggcccggggaccctcccggggggggccgagccccgggacccccgcgcagggccca
ccccgggcagcgccgcccccgctgcggccgtcgcagagctgggctgaggggagccccggc
ccgggccggccccccccgcgccccccgagccccccgcgggcggcggcggccgcagccccg
gcagtgacaccatag

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