Serinus canaria (common canary): 115485316
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Entry
115485316 CDS
T05755
Symbol
VPS16
Name
(RefSeq) LOW QUALITY PROTEIN: vacuolar protein sorting-associated protein 16 homolog
KO
K20180
vacuolar protein sorting-associated protein 16
Organism
scan
Serinus canaria (common canary)
Pathway
scan04140
Autophagy - animal
scan04148
Efferocytosis
scan05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
scan00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
115485316 (VPS16)
04148 Efferocytosis
115485316 (VPS16)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
115485316 (VPS16)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
scan04131
]
115485316 (VPS16)
Membrane trafficking [BR:
scan04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
115485316 (VPS16)
Hops complex
115485316 (VPS16)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vps16_N
Vps16_C
Motif
Other DBs
NCBI-GeneID:
115485316
NCBI-ProteinID:
XP_030094878
LinkDB
All DBs
Position
Unknown
AA seq
828 aa
AA seq
DB search
PGRKLELYSMEWGLREDLRDCVVAAAPYGGPIALLRNSRRDKTPSARPLLEIYSASGLLL
ASVPWKSGQLVHLGWTAGEDLLCIQEDGTVLVYNLFCEFKRHFSMGNEVLQNHVLEAQVF
HTEFGTGVAILTGALRFSLATNIDDLKLRRLPEVPGLQKPPPCWTVLAQDRVTMVLLAMG
QELFLLDNTSCSVLTPPGLIPSLSSDPPRGAFPALVSFTQRHLALFSDCGSVWMGAASLK
EKFCEFNTGIRSPPKQMVWCTRPRSRQRAVVLAWERQLMVVGNSSESIRFVLDEDSYLVP
ELDGVRILSRSSHEFLHEIPEASQEIFRIASMAPGALLLEAQKEYEKESQKADEYLREIR
EQQLLPEAVGQCIEAAGYEHEPDTQKSLLRAASFGKCFLDKFPPEGFVRMCQDLRVLNAI
RDYQIGIPLTFTQYKQLTIEVLLDRLVLRRLYPLAIRICEFLRLPEMQGVSRILAHWXCY
KVQQKDKSDEEVAQAINQKLGDTAGISYXDIATRAYDCGRAELAIKLLEYEPRSGEQVPL
LLKMKRSKLALGKAIESGDTDLVYTVVLHLKNELNRGSFFMTLQNQPVALSLYRQFCRHQ
ERETLKDLYNQDDNHQELGNLHVLGATARGSRIEGRVAALQNALDEFYKAKNDFAAKATE
EQIKLLRLQRHLQEELDKPYLDLSLHDTVATLILDGHHKRAEQLYRDFRIPDKRYWWLKI
NALATRGDWEEMEKFSKSKKSPIGYLPFVEVAVKHHNRYEAKKYAPRVPPEQRVKAFVLV
GDLEQAAEAAIERKNEAEMSLVLSGAPPAPTGXLAERLNRARAQLLKK
NT seq
2487 nt
NT seq
+upstream
nt +downstream
nt
cccggcaggaagctggagctctactccatggaatgggggctgcgggaggatctccgtgac
tgcgtggtggcagctgccccatatgggggtcccatagctctgctgaggaattcccggcgg
gacaagacccccagtgcccgcccgctcctggagatctactcggcctcggggctgctcctg
gccagtgtcccgtggaagagcggccagctggtgcacctgggctggacagcgggggaggac
ctgctgtgcatccaggaggatgggactgtcctggtctacaacctgttctgcgagttcaag
cggcacttcagcatgggaaacgaggtgctgcagaaccacgtgctggaggcgcaggttttc
cacaccgagttcgggacgggcgtggccatcctgacgggagcgctgcgcttctccctcgcc
accaacatcgacgacctcaagctgcgccgcctgcccgaggtccctgggctgcagaagccc
cccccgtgctggaccgtgctggcccaggacagggtgaccatggtgctgctggccatggga
caggagctcttcctgctggacaacacctcctgctccgtgctgacgccccccgggctgatc
ccctcgctgtcctctgaccccccgcgcggggccttccctgcgctggtgtccttcacccag
cggcacctggcgctcttctccgactgcggctccgtctggatgggcgcggcctcgctcaag
gaaaagttctgcgagttcaacaccggcatccgatccccgcccaagcagatggtttggtgc
acgcggccccgcagccggcagcgagccgtggtgctggcctgggagcggcagctgatggtg
gtgggcaactcctcggagagcatccgctttgtcctggatgaggattcctacctggtgccc
gagctggacggggtcaggatcctgtcccgcagctcccacgagttcctgcacgagatccca
gaggccagccaggagattttccgcatcgcctccatggctccgggcgctctgctgctggag
gcacagaaggagtacgagaaggagagccagaaggctgacgagtacctgcgggagatccgg
gagcagcagctgctccccgaggccgtgggccagtgcatcgaggccgcgggctacgagcac
gagcccgacacccagaaatccctgctgagggcagcttccttcgggaagtgtttcctggat
aagttccctccggaggggttcgtgcgcatgtgccaggacctgcgggtcctcaacgccatc
cgggactaccagatcgggatcccgctcaccttcacccaatacaaacagctcaccatcgag
gtgctgctggacaggctggtcctgcgccgcctgtaccctctggccatccgcatctgcgag
ttcctgcgcctgccggagatgcagggcgtcagccgcatcctggcacactggngctgctac
aaggtgcagcagaaggacaagtcggacgaggaggtggcccaggccatcaaccagaagctc
ggggacacggcgggcatctcctacntcgacatcgccacgcgcgcctacgactgcggccgc
gccgagctggccatcaagctgctggagtacgaaccccggagcggggagcaggtgccgctg
ctgctgaagatgaaacggagcaaactggccctgggcaaggccatcgagagcggggacact
gacctggtgtacacggtggtgctgcacctcaagaacgagctcaaccgaggctccttcttc
atgaccctgcagaaccagcccgtggccctgagcctgtaccgccagttctgccggcaccag
gagcgggagacgctgaaggatttgtacaaccaggatgacaaccaccaggagctgggcaac
ctgcacgtgctgggggctactgccagagggtcacggatcgagggccgcgtggccgccctg
cagaatgccctggatgagttctacaaggccaagaatgatttcgctgccaaggccacggag
gagcagatcaagctgctgcggctgcagcggcacctgcaggaggagctggacaagccctac
ctggacctgtccctgcacgacaccgtggccaccctcatcctggacgggcaccacaagcgc
gccgagcagctctaccgggacttcaggatcccagacaagaggtactggtggctgaagatc
aacgccctggccacccgcggggactgggaggagatggagaagttctccaagagcaagaag
tcgcccattgggtacctgcccttcgtggaggtggcagtgaagcaccacaaccgctacgag
gccaagaagtacgcgccgcgtgtgccacccgagcagcgcgtcaaggccttcgtcctcgtg
ggggacctggagcaggcggccgaggcggccatagagcgcaagaacgaggccgagatgagc
ctggtgctgtccggtgctcccccggcaccgacggggnncctggcagagcggctcaaccgg
gcccgggcacagctcctcaagaagtga
DBGET
integrated database retrieval system
