Sporomusa carbonis: SCACP_01360
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Entry
SCACP_01360 CDS
T10996
Symbol
spoVD_1
Name
(GenBank) Stage V sporulation protein D
KO
K08384
stage V sporulation protein D (sporulation-specific penicillin-binding protein)
Organism
scao Sporomusa carbonis
Pathway
scao00550
Peptidoglycan biosynthesis
scao01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
scao00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
SCACP_01360 (spoVD_1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
scao01011
]
SCACP_01360 (spoVD_1)
Peptidoglycan biosynthesis and degradation proteins [BR:
scao01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
SCACP_01360 (spoVD_1)
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Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
PASTA
PBP_dimer_2
Beta-lactamase2
DUF1002
Motif
Other DBs
NCBI-ProteinID:
XEQ91341
LinkDB
All DBs
Position
174266..176248
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AA seq
660 aa
AA seq
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MAAMPVHIQRRLALFLTFAMLAIALLVVRIAWIQFGEGQQLSAKVRDQLKESRVLQSPRG
TIYDRGGRELAVSNMAKSLYADPREVKDIDATAGLLAPVLGVSPADIKARLMVDGSFIWL
KRTLEPEQAKRVEALIKDYHLSGLDFVEESKRYYPNDSLAAHVLGFVGTDDVGLEGIEMV
LDKTIKGQEIKQVINTDSYGTPIFNSIFSFIPKKQGRSVYLTIDSTIQYIVEKALDNAMA
HTGAKAATIIVMQPKTGEILAMASRPTYNPNQFYNYSPAEWKNRAVSIVYEPGSTFKAVV
AAAALQEGKVRPNERFIDKGYVEVSGRRIKNWSDESYGEVSFTDIIKNSINTGFVEIGMR
LGAAKLTNYVRAFGFGKATGIGLAGEEEGILFDPKDMRDSDLATMSIGQSIAVTPLQMIT
AISAIANDGVLLKPRIIREYRNADGTLAESFEPVVVRQVISPETAHTLTTLLEKVVSEGG
GQKAKVKGYRFAGKTGTAEKLKSNGIGYESGHYIASFAGFGPVEDPQVAALIVIDDPAGM
YYGGEIAAPVFNEIMSQIMRYLAIRPQDDGTLLPPAKPADAKEQLPHAGPTSEGPPPVVP
PGQVLVPALNGKTIRETGDELHRLGLTFVPVGTGTAVKQNISPNTPVKPGTEVIVYFEPK
NT seq
1983 nt
NT seq
+upstream
nt +downstream
nt
atggcggctatgccggtacatattcaacgacgcctggctttgtttttaacctttgcaatg
ttggcgattgctcttcttgtggtaagaattgcctggattcagttcggtgaaggccagcaa
ctaagcgctaaggtgcgtgaccagcttaaagaaagccgggtgctgcagtcgccacgtggt
actatctatgaccggggcgggcgggaattggcagtaagcaatatggccaaatcactttac
gctgatccgcgcgaggtcaaagatattgatgcgacagccggcctgctggcgccggttctt
ggtgtcagtcctgctgatattaaagcaaggttaatggtcgacggcagttttatctggctt
aagcgaacgcttgaaccagaacaagctaaaagagtggaagcgctgatcaaagactaccac
ctttccggacttgattttgtggaagaaagcaaacgctattatcccaatgacagtttggca
gcgcatgtattagggtttgtcggcaccgacgatgttggtcttgaaggtattgagatggtg
cttgataagacgattaagggacaggaaattaagcaagttattaataccgacagttacggt
acgccgatattcaattcgatattttcatttattccgaagaagcagggccgttcagtatat
ttaacgattgacagcacgattcaatacattgtggaaaaggcacttgacaatgcgatggct
catacaggcgccaaggcggccacgataattgtcatgcaacctaaaacaggtgaaattttg
gctatggctagccgcccgacctataatcccaatcagttttacaattatagtccggctgag
tggaagaaccgggcagtatcgattgtctatgaaccggggtcgacttttaaagccgttgta
gcggcagctgccttgcaagaaggtaaagtacgtccgaatgaacggtttatcgataaaggc
tatgtggaggtatcggggcggcggataaaaaattggagtgatgaaagttacggtgaggta
tcatttaccgatattattaaaaactcaattaataccggctttgttgaaatcggcatgcgc
ttgggggcagccaaattaacaaattatgtgcgggcttttggttttggtaaagcaacaggc
attgggctagccggagaggaagaaggcatattatttgatcctaaagacatgcgggacagt
gacttggcaaccatgtccatcggccagagtattgccgtaacaccgctgcaaatgattacg
gcaatatcggcgattgccaatgacggtgtattgttaaagccccgtattatccgcgaatat
cgtaatgccgacggtacgttggccgagtctttcgaaccggtagtcgtccgacaggtcatt
agtccggaaacagcacacacgctaaccacattgctggaaaaagttgtaagtgaaggtggt
ggccaaaaggccaaagtcaaagggtatcgttttgcagggaaaacgggtacggcagaaaaa
ttaaagtctaacggcattggttatgagtcaggacactatattgcttcttttgccggcttt
gggccggtagaagacccgcaagtggctgcgcttattgtcattgatgatccggcaggcatg
tactacggcggggaaattgccgcaccggtatttaatgaaatcatgtcccaaattatgcgg
tatctggctatccggccacaggacgacggtacgcttttaccaccggctaaaccggctgat
gctaaggagcaattgcctcatgcagggccaacttccgagggaccgccgccggttgtgccg
cccgggcaagttctggttccggctcttaacggcaagacaattcgggaaacaggggatgag
cttcatcgtttggggcttacttttgtacctgttggcaccggcacggccgtaaaacagaac
attagccccaatacgcctgtcaaaccgggaactgaagtaatcgtctactttgaacctaag
taa
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