Sporomusa carbonis: SCACP_04540
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Entry
SCACP_04540 CDS
T10996
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
scao Sporomusa carbonis
Pathway
scao03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
scao00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
SCACP_04540 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
scao03021
]
SCACP_04540 (rpoA)
03400 DNA repair and recombination proteins [BR:
scao03400
]
SCACP_04540 (rpoA)
Enzymes [BR:
scao01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
SCACP_04540 (rpoA)
Transcription machinery [BR:
scao03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
SCACP_04540 (rpoA)
DNA repair and recombination proteins [BR:
scao03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
SCACP_04540 (rpoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
SAM_EPH
HHH_5
RAD51D_N
Motif
Other DBs
NCBI-ProteinID:
XEQ91646
LinkDB
All DBs
Position
485352..486311
Genome browser
AA seq
319 aa
AA seq
DB search
MIEIEKPKIEIVEISEDNRYGKFVWEPLDRGFGITLGNSLRRVLLSSLPGAAVTSVKIDG
VLHEFATIPGVREDVTDIILNLKELCLKMHSDEPKVLLVEAFEEGDVTAGDIKADADIDI
LNPELHLATVGAGGKLRMEIMVEKGKGYVPADKNKKPDHVIGIIPVDSIFSPIVRVNYNV
TDTRVGNVTNYDKLTLEVWTDGSMRPEEAVSKAAGIMVSHLKLFQNIAGEPPEEDEGQGL
VSEEPAEGKNRVMEMTIEDLDLSVRSYNCLKRAGINTVAELTQKSEEDMMKVRNLGRKSL
EEVKKKLIEMGLALAENED
NT seq
960 nt
NT seq
+upstream
nt +downstream
nt
atgattgaaatcgaaaaaccgaaaatcgaaatagtggaaataagcgaagacaaccgttat
ggcaaattcgtatgggaacccttagaccggggctttggcatcacactgggcaacagtctg
agaagggtacttttatcgtcattgccgggtgcagccgtaacatcagtaaaaattgacggc
gtgcttcacgagtttgccactattcccggtgttcgggaggacgtcaccgacattatttta
aacctaaaagaactgtgcctgaaaatgcatagtgatgaaccgaaagttttactggtagaa
gcgtttgaagaaggcgatgtcacagctggcgacatcaaggccgacgccgatattgatatc
ttaaaccctgagctccacttggcgacagttggtgctggcggcaaactccgcatggaaatc
atggttgaaaaaggcaaaggctatgtacccgctgataagaacaaaaagcccgaccatgta
atcgggattattccagttgactccatcttctcaccgattgtacgcgtcaattacaacgtt
actgatacgcgtgtcggcaatgtaaccaactatgacaagctgacattagaagtatggacc
gacggcagtatgcgtcccgaagaagcggtcagcaaagctgctggcatcatggtgtcgcac
ctgaaattatttcaaaatattgccggagaacctccagaagaggatgagggtcagggattg
gtgtctgaagaaccggctgaaggcaaaaacagggtaatggaaatgaccattgaggatctg
gacctctcggtgcgttcttacaactgtttaaaacgggccggaatcaatacagtagctgag
cttactcaaaagagcgaagaagacatgatgaaagttcgcaacttagggcgtaaatcactg
gaagaagtcaagaaaaagcttattgagatgggtcttgcactggctgaaaacgaagattaa
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