Sporomusa carbonis: SCACP_08330
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Entry
SCACP_08330 CDS
T10996
Symbol
dinG_2
Name
(GenBank) 3'-5' exonuclease DinG
KO
K10844
DNA excision repair protein ERCC-2 [EC:
5.6.2.3
]
Organism
scao Sporomusa carbonis
Pathway
scao03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
scao00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
SCACP_08330 (dinG_2)
09124 Replication and repair
03420 Nucleotide excision repair
SCACP_08330 (dinG_2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
scao03021
]
SCACP_08330 (dinG_2)
03036 Chromosome and associated proteins [BR:
scao03036
]
SCACP_08330 (dinG_2)
03400 DNA repair and recombination proteins [BR:
scao03400
]
SCACP_08330 (dinG_2)
Enzymes [BR:
scao01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
SCACP_08330 (dinG_2)
Transcription machinery [BR:
scao03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
SCACP_08330 (dinG_2)
Chromosome and associated proteins [BR:
scao03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
SCACP_08330 (dinG_2)
DNA repair and recombination proteins [BR:
scao03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
SCACP_08330 (dinG_2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C_2
DEAD_2
DEAD
HBB
ResIII
Helicase_C
IMS_C
PhoH
Motif
Other DBs
NCBI-ProteinID:
XEQ92018
LinkDB
All DBs
Position
870885..873263
Genome browser
AA seq
792 aa
AA seq
DB search
MSANRVVKISVRNLVEFVLRSGDLVATFTGSLRMMDGSKIHRKIQQTQGSEYEPEVSLSI
LVERPGVTLHISGRADGVIVTKDETGNEQVTIDEIKSITADLEGIEECYNPLHWAQAKCY
AYIYAVQHGLEKINVQISYCQVTTLEIKSFKQLYSAGELAEFFNQLITQYVMWAERVGDW
IEVRDNSARLLDFPFASFRHGQRQLAVAVYKALSMGLKLYAQAPTGTGKTMATIFPAVKA
MGMGHVEKIFFLTAKTVTRQLAEEAFDRLRQTGLKFKTLTLTAKEKICFMPGAACTPEEC
PYAEKYFDKIGPVLNDCWRLEAFTREVIEQYARKHMVCPFELSLDLAVWADAVICDYNYV
FDPAVCLKRFFYENNGQYCFLVDEAHNLVDRAREMFSAKIMKQTFLDLRKDVKEKLPRLA
KAAGKINSYLVKIGKLCVEKSAVGQPDYCVREEPLTDILPLLRKFASLAEEWLASNEPAD
FREKLLDTYFEVNAFLRTSEMYDERYVTYVEKAGKDVKLKLFCVNPSELLRQALARGRAA
VFFSATLTPLNYFLKMLGGAEGDGKIAVPSPFTHNNLCLLVADNISTTYKTREKTYDVVV
ESITAAIGARTGNYLVFFPSYRYMEEVYQRFCLKNPLIRVIRQVGEMTEEERTEFLRQFS
GDNAATLVGFAVLGGVFGEGVDLTGERLVGAVVVGVGLPQVCLEREIIRNWFNKDKYQGF
EYAYVYPGMNKVLQAAGRVIRTEDDQGLVLLIDDRFSQPRYRRLFPREWHGAINVKSVGN
IADAAKEFWAKG
NT seq
2379 nt
NT seq
+upstream
nt +downstream
nt
atgtctgcaaacagagtggtaaaaatttcagtacggaatttagttgaatttgtgcttcgg
tccggagatttggtagcaacttttaccggtagcttgcgtatgatggacgggagcaaaatt
catcgtaaaattcaacagacgcaaggttcagagtatgagccggaggtaagtttatcgata
ttggtggaaaggcctggcgtgacattacatatcagcgggcgggctgacggcgtgatagtc
actaaggatgaaaccggtaacgaacaggtgacaattgacgaaattaagtcaataactgcc
gatcttgaaggaattgaggaatgttataatccgctgcactgggcgcaagctaagtgctat
gcttatatctatgcagtacagcatggtcttgaaaaaatcaatgttcagatttcctactgt
caggttactacattagaaatcaagagttttaaacagttgtactctgcgggagagctggca
gagtttttcaaccagctgataactcaatatgtaatgtgggcggaacgggtgggagactgg
atagaagtacgcgacaattccgcccggctgttagactttccctttgcatcttttcggcat
ggccagcggcagctggctgttgctgtatataaggcattgagtatggggcttaagctgtat
gcccaggcgcctaccggcacaggcaagacaatggcaactatatttcccgctgtcaaggcc
atgggaatgggacatgtagaaaaaatttttttcctcacggctaagacggtaacacgccaa
ctggcagaagaagcctttgataggctgcggcaaacaggtttaaaatttaaaactttgaca
ttgactgccaaagaaaaaatatgctttatgcctggagcggcgtgtactcctgaagagtgc
ccatatgcggaaaagtattttgacaaaattggcccggtattgaacgactgctggcggctt
gaagcttttacccgcgaagtaatcgagcaatatgcccgcaagcatatggtttgtccgttt
gaattgtccctggacttggccgtgtgggccgacgcagtcatatgtgactataactacgta
tttgacccggccgtctgtctcaaacgttttttttatgaaaataacgggcaatattgtttt
cttgttgatgaggcccataatcttgttgatcgggcacgtgaaatgttttcagcaaaaata
atgaagcagactttccttgatttaaggaaggatgttaaggaaaagctgccacggctggct
aaagccgcagggaagataaactcgtatctggtgaagattgggaagctgtgtgtggaaaaa
tcggcagtgggacaacctgactactgtgtgcgagaagagccgttaactgatatcttgcca
ctgctaagaaagtttgcaagtttggccgaagagtggctggccagcaatgaaccggcagat
tttcgcgaaaaacttttggatacttatttcgaagttaatgcgtttttgcggacttctgag
atgtatgatgaaagatatgtgacgtacgtcgaaaaggcgggaaaggacgtaaaactcaag
ctcttttgcgttaacccttcggagttattgcggcaggctttggcgcgggggcgggcggca
gtctttttttctgctactttaacaccgcttaattactttttgaaaatgttgggcggtgcc
gaaggggatggaaaaatagcagtgccttctccgtttactcataacaatctatgtttgctt
gtggctgacaatattagcactacttataaaacacgggagaagacttatgatgttgttgtc
gaaagcataactgcggcaattggcgccagaaccggaaactatttggtattttttccgtca
tatcggtatatggaggaagtgtatcagcggttttgtttgaaaaacccgttgatacgggtg
atccggcaagttggtgaaatgacggaagaggaacgtaccgagtttttacgccagttctcc
ggtgacaacgcggctacacttgtgggatttgctgtacttggcggggtatttggcgaaggg
gttgatctaaccggcgagcggctcgtcggggctgttgtcgtcggcgtgggcttgccgcag
gtttgcctggagcgggaaattatccggaactggtttaataaagataaataccagggattt
gagtacgcctatgtttatccgggaatgaacaaagtcctgcaagcggcggggcgggtaatt
cgtaccgaagatgaccagggattggtcctcctgattgacgataggttttctcagcccagg
tataggaggctatttccgcgagaatggcatggagccataaatgtcaaaagcgttggcaat
attgctgatgcggcaaaagagttttgggctaagggataa
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