Sporomusa carbonis: SCACP_09440
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Entry
SCACP_09440 CDS
T10996
Symbol
groL
Name
(GenBank) 60 kDa chaperonin
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
scao Sporomusa carbonis
Pathway
scao03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
scao00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
SCACP_09440 (groL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
scao03019
]
SCACP_09440 (groL)
03110 Chaperones and folding catalysts [BR:
scao03110
]
SCACP_09440 (groL)
03029 Mitochondrial biogenesis [BR:
scao03029
]
SCACP_09440 (groL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
scao04147
]
SCACP_09440 (groL)
Enzymes [BR:
scao01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
SCACP_09440 (groL)
Messenger RNA biogenesis [BR:
scao03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
SCACP_09440 (groL)
Chaperones and folding catalysts [BR:
scao03110
]
Heat shock proteins
HSP60 / Chaperonin
SCACP_09440 (groL)
Mitochondrial biogenesis [BR:
scao03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
SCACP_09440 (groL)
Exosome [BR:
scao04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
SCACP_09440 (groL)
Exosomal proteins of other body fluids (saliva and urine)
SCACP_09440 (groL)
Exosomal proteins of breast cancer cells
SCACP_09440 (groL)
Exosomal proteins of colorectal cancer cells
SCACP_09440 (groL)
Exosomal proteins of bladder cancer cells
SCACP_09440 (groL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
FRP
Motif
Other DBs
NCBI-ProteinID:
XEQ92128
LinkDB
All DBs
Position
974559..976199
Genome browser
AA seq
546 aa
AA seq
DB search
MAKQILFDEEARRALERGVNALANAVKVTLGPKGRNVVLDKKFGAPAITNDGVTIARDIE
LEDPFENMGAQLVKEVATKTNDVAGDGTTTATLLAQAMIREGMRNVAAGANPMILKKGIQ
KAVDVLVEEIKKSAKKVETKDAIAQVASISAADEEIGKLIAEAMEKVGKDGVITVEESKT
MGTDLEVVEGMQFDRGYISPYMITDTDKMEAVLNDPYILITDRKIGAVADLLPVLEKVVQ
QGKELLIIAEDVEGEALATLVVNKLRGTFRAVAVKAPGFGDRRKAMLEDIAIITGGAVIT
EELGRKLDSVQLSDLGRARQVRVSKEETTIVDGNGQADDIKKRVNQIRAQIEETTSDFDK
EKLQERLAKLAGGVAVIQVGAATEVELKEKKLRIEDALNATRAAVEEGIVAGGGTTFIDI
QASLDNLKLDGDEQTGVQIVKRAIEEPVRQIANNAGLEGSVVVENVKKVGKGMGFNALTE
EYVDMIAAGIVDPAKVTRSALQNAASIAAMVLTTETLVADKPEKEAGAAPGGMGGMGGMG
GMGGMM
NT seq
1641 nt
NT seq
+upstream
nt +downstream
nt
atggctaagcaaattctgtttgacgaagaagcccgccgggcgctcgaaagaggcgtaaat
gctctggctaatgctgttaaagtaactttaggacctaaaggccgcaacgttgtgcttgat
aaaaagtttggcgctccagcaattaccaatgacggcgtaaccatcgcccgtgatattgag
ctggaggatccgtttgaaaatatgggtgcgcaactggttaaagaagttgccaccaaaacg
aatgacgtagccggtgacggtactaccaccgctactcttttggctcaagctatgattcgc
gaaggcatgcgtaacgttgcagccggcgctaaccccatgatcctgaaaaagggcattcaa
aaagctgttgatgtgcttgttgaagaaatcaagaaaagcgccaagaaagttgaaaccaag
gacgctattgctcaagttgcctccatttcggctgcagacgaagaaattggcaagctgatt
gccgaagctatggaaaaagtcggtaaagacggcgttattaccgttgaagagtccaaaacc
atgggcaccgacctcgaagttgttgaaggtatgcaatttgaccgtggctacatttctccg
tatatgattaccgacacggataaaatggaagcagtcctgaacgatccatacattcttatc
actgaccgcaagatcggtgctgttgccgacctgttgccggtactggaaaaagttgttcag
caaggcaaagaactgctcattatcgctgaagatgttgaaggcgaagccttggctacgctg
gttgtcaacaaactccgcggcaccttccgcgctgtagctgttaaagctcctggtttcggt
gatcgcagaaaggctatgcttgaagatattgccattatcaccggcggtgctgttatcact
gaagaattgggccgcaaacttgacagcgtacaactgtccgatctgggccgtgcgcgtcaa
gtgcgcgtatctaaggaagaaaccactattgttgacggcaatggtcaagccgacgatatc
aaaaagcgtgttaaccaaatccgcgctcaaatcgaagaaactacttccgactttgacaaa
gaaaaactgcaagagcgtctggccaaacttgctggtggcgtagctgttatccaagtcggc
gctgctaccgaagttgaactcaaagaaaagaaactgcgcattgaagacgcccttaacgca
acgcgcgctgctgttgaagaaggtattgttgccggtggcggcaccaccttcatcgacatt
caagctagcttagacaacttgaagcttgacggcgacgaacaaaccggtgttcaaatcgta
aaacgcgccatcgaagaaccggtacgtcaaattgccaataacgctggtttggaaggttcg
gtcgttgtcgagaatgttaagaaagtcggcaaaggtatgggcttcaacgctctgaccgaa
gaatatgtagacatgattgctgctggtattgttgacccagccaaagttacccgctcggca
ctgcagaacgctgccagcatcgcggctatggttcttaccaccgaaactcttgtcgctgat
aagcctgaaaaagaggctggtgctgctcctggcggtatgggcggcatgggtggtatgggc
ggcatgggcggcatgatgtaa
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