KEGG   Sporomusa carbonis: SCACP_12370
Entry
SCACP_12370       CDS       T10996                                 
Name
(GenBank) hypothetical protein
  KO
K18831  HTH-type transcriptional regulator / antitoxin HigA
Organism
scao  Sporomusa carbonis
Brite
KEGG Orthology (KO) [BR:scao00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:scao03000]
    SCACP_12370
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:scao02048]
    SCACP_12370
Transcription factors [BR:scao03000]
 Prokaryotic type
  Helix-turn-helix
   Other families
    SCACP_12370
Prokaryotic defense system [BR:scao02048]
 Toxin-antitoxin system (TA system)
  Type II TA system
   HigB-HigA
    SCACP_12370
SSDB
Motif
Pfam: HTH_3 Peptidase_M78 HTH_26 HTH_19 HTH_24 HTH_31 HTH_Mga HTH_Crp_2 DUF4344
Other DBs
NCBI-ProteinID: XEQ92392
LinkDB
Position
1274073..1275143
AA seq 356 aa
MDEKYQAVIAIPPGETLAEMLEDREMSQKDLANRTGLTPKHINEIIQAKAPITVDTALKF
EAVLGTPASFWTNLEANYQETLARLSVEAALESEIPLLGQIPYAELAKLGLVKVTRNNRE
RVLSAREFFSVASLERLPEIVPAAFRTATAHEASPLALAAWLRCGERAAQAMSVSSFQKD
KLKASLPALRSLTLQPQQTIQSKLQEICSESGVAVVFVPHLPKTYVHGAAYWLSPQRAVV
QMSFRRKYADVFWFSFFHEIGHILLGHSKKEVFISYDTPGTASLKEEGEADRFAADVLIP
SSAYRAFVKKGDYSVFAIRAFADEINIHPGIVVGRLQHDRHLIYQQANQLREQYEF
NT seq 1071 nt   +upstreamnt  +downstreamnt
atggatgaaaaataccaagctgttatcgcaatacctccgggagaaacactggctgaaatg
ctggaagaccgggagatgtcacaaaaagatttagccaatcgcaccggtctcacgcctaag
catattaacgagatcattcaagcaaaagctccgattaccgtagatacagctcttaagttt
gaggcagtgctgggaactcccgcatctttttggactaacctggaggcaaactatcaagaa
acattagcccgtttgtcagttgaggccgcactggaaagtgaaattccactgctcggtcaa
attccgtatgcggaattagcaaagcttgggctggtaaaggtaacccggaataaccgggaa
cgagtgctttcagcacgcgagtttttttctgtcgcgtcgcttgaaagattgccggaaatt
gttccggccgcgttccgcacagctaccgcgcatgaagcgtctccgctcgccctggcggca
tggcttcgctgtggtgagcgggcagcacaggcaatgtctgtgtcttcttttcaaaaagac
aaactgaaagcttcactaccggcgcttcgttcattaacattgcagccgcagcaaacgatt
cagtccaagctgcaggagatctgcagcgaaagcggtgtggctgttgtttttgtcccgcat
ctgccgaaaacctatgttcacggtgcggcatattggctaagtccccagcgggccgttgta
cagatgagctttcggagaaaatatgctgacgtcttctggttttcgttcttccatgaaatt
ggccatatcttattaggccacagtaagaaagaagtttttatcagctatgacactcctggg
actgctagcctgaaagaagaaggggaagcagaccgatttgccgctgatgtactcatccct
tcatcagcctatcgggcatttgtaaaaaaaggggattactccgtgtttgctatccgggct
tttgctgacgaaattaatattcatcccggaattgttgtgggacggcttcagcatgatcgc
catttaatctatcagcaggctaaccagttaagagaacaatatgaattttag

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