Sporomusa carbonis: SCACP_15990
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Entry
SCACP_15990 CDS
T10996
Symbol
topA
Name
(GenBank) DNA topoisomerase 1
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
scao Sporomusa carbonis
Brite
KEGG Orthology (KO) [BR:
scao00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
scao03032
]
SCACP_15990 (topA)
03400 DNA repair and recombination proteins [BR:
scao03400
]
SCACP_15990 (topA)
Enzymes [BR:
scao01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
SCACP_15990 (topA)
DNA replication proteins [BR:
scao03032
]
Prokaryotic type
DNA Topoisomerases
SCACP_15990 (topA)
DNA repair and recombination proteins [BR:
scao03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
SCACP_15990 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
Zn_ribbon_recom
Toprim_4
Toprim_2
Motif
Other DBs
NCBI-ProteinID:
XEQ92748
LinkDB
All DBs
Position
1621812..1623929
Genome browser
AA seq
705 aa
AA seq
DB search
MTKALVVVESPAKAKTIEKFLGKNYLVKASMGHLRDLPKSQFGVDIEHGFEPKYINIRGK
GELIKSLKEAAKNADTVYLATDPDREGEAIAWHLAHILNIPEQTTCRIEFNEITKPAIQQ
AVKKPRPINMPRVYAQQARRILDRIVGYKLSPLLWRKVRKGLSAGRVQSVAVRLICDREK
EIQAFIPEEYWTITAKLKEKPNSKAFDAELATIDGKKLDVNNEAQAQRIVVELNQAEFIV
SDVKQRERKRNPYPPFITSSLQQEAARKLGFTSRKTMMVAQQLYEGLDIGQAGQVGLITY
MRTDSTRVAETAQQEARNYIESKFGSDYLPDKAPVYANKKSQDAHEAIRPTTLGLPPEAV
APSLSKDQLKLYTLIWERFIASQMNPAIYDTLTVEITAGRYKFKATGSQLKFPGFLAAFS
GAIGKGKEVEQNSDSDLDNEATLPELKSGQILKLYKLLPNQHFTEPPPRYTEASLVKVLE
EKGIGRPSTYAPTIETIVERGYVERIDKKFQPTELGFVVLDLLKQYFNKIVDVEFTAGME
DQLDDIAEGNVSWFEVLEQFYGPFANDLSFAEEAIGHVELPVEVSDVACENCGRMMVIKQ
GRYGSFLACPGFPACRNTKPVLKDIGVKCPKCGGAIVERQTKRRRIFYGCENYPECDFTT
WDMPLKENCPVCGAYMIRHKYKNGGFATICSSESCSSRQTSDNKE
NT seq
2118 nt
NT seq
+upstream
nt +downstream
nt
gtgaccaaagctctagttgtcgtagagtccccggctaaagccaagacaatcgaaaaattt
cttggaaaaaattatttagttaaagcttccatggggcatttgcgtgacttgcccaaaagc
cagtttggcgtagatattgagcatggctttgaaccgaaatatattaacatcagaggtaag
ggcgaactgataaaaagcctgaaagaagctgccaaaaatgccgatacagtttatctcgcg
actgaccctgaccgagaaggcgaagcgattgcctggcatttagctcacatcttaaatatt
ccagaacaaactacttgccggattgaattcaatgaaatcaccaaaccggctattcaacaa
gcggttaaaaaaccgcgacccatcaacatgccgcgagtgtatgcccagcaggccagacgc
atacttgaccggatcgttggttacaaactgagcccgcttttatggcgtaaagtgcgcaaa
ggtttgagcgccgggcgggtacagtcggtagctgtcaggttaatttgtgatcgggaaaaa
gaaatccaagcgttcattcctgaagagtattggacaattaccgctaaactcaaagaaaaa
cctaattccaaagcatttgatgcagaactggcaacaattgacggcaagaaattagacgtc
aataacgaagctcaggctcagcgtattgttgttgaactaaatcaggctgaatttatagtc
agtgatgttaaacagcgggagagaaaacgcaatccctatccaccatttatcaccagcagc
cttcagcaagaagcagctcgtaaattaggatttacctcccgcaaaaccatgatggttgcc
caacaactatatgaaggtcttgacattggccaggccgggcaggtcggccttattacctat
atgcgtaccgattcgactcgggtggctgaaactgctcaacaggaagccagaaattatatt
gagtccaaatttggttcagattatctgccagacaaagcgccggtttatgccaataagaag
tctcaggatgctcatgaggccattcggccgactactctcggtttgccgcctgaagccgtt
gcgccaagtctcagtaaagaccaactaaaactctatacgcttatatgggaaagatttatt
gccagccagatgaacccagccatttatgatacactcactgtggagattactgctggtcgc
tataaatttaaagcgactggatcacagcttaaatttcctggatttttggcggcttttagc
ggtgctattggcaaaggtaaagaagttgagcaaaattccgatagtgatttggataatgaa
gctactctacctgaacttaaatctggccaaattttaaagctgtataagttgctgcccaac
cagcattttactgagccgccgccccggtatactgaagcgtcgttggtcaaagtgcttgaa
gaaaaaggtattggtcgtcctagtacttatgctccgacgattgagactattgtcgagcgg
ggttatgttgaacgtattgataaaaaattccagccaactgaacttggctttgtcgtactt
gacctcttaaagcaatattttaacaaaattgttgatgtcgagtttacggccggaatggaa
gaccaattagatgacatagctgaagggaatgtctcgtggttcgaggttttagaacaattt
tacggtccgtttgctaacgacttgagttttgccgaagaagctatcggtcatgtagagctg
ccggtagaggtatctgatgttgcctgtgaaaattgtggccggatgatggtcataaaacag
ggacgctatggtagctttttggcctgtccgggattccccgcttgccgcaacaccaaacct
gtcttaaaagatatcggtgtaaaatgtccaaaatgtggcggtgctattgttgagcggcag
actaagaggcgtagaatcttttatggttgtgaaaactatccggaatgcgattttactact
tgggatatgcctttaaaagaaaattgtcctgtgtgtggggcgtatatgattaggcacaaa
tacaaaaatggcggttttgctacaatatgcagcagtgaatcctgctcttcaaggcaaact
tctgataataaagagtag
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