Sporomusa carbonis: SCACP_16640
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Entry
SCACP_16640 CDS
T10996
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
scao Sporomusa carbonis
Brite
KEGG Orthology (KO) [BR:
scao00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
scao03016
]
SCACP_16640 (truB)
Enzymes [BR:
scao01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
SCACP_16640 (truB)
Transfer RNA biogenesis [BR:
scao03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
SCACP_16640 (truB)
Prokaryotic type
SCACP_16640 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
DKCLD
Motif
Other DBs
NCBI-ProteinID:
XEQ92813
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All DBs
Position
1682826..1683704
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AA seq
292 aa
AA seq
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MPNGIINVLKPPGMTSHDVVSFVRRQYGIKRVGHAGTLDPAAAGVLPVFLGNTTRLIEYL
ADADKSYRAEITFGFATDTGDDTGQIIASQPYTRPEANKIKEVLASFIGVNEQIPPMYSA
IKVDGKKLYELARLGQTVERKPRKIVISNIALVRECEKGIVFDVTCSKGTYIRTLCADIG
RRLNCLAVMSFLVRTRVGNFYLNQSLTLEEIIARKEQAIQNADSVLTHIPAIILSEQDSL
AVKNGRSIQCEKTGADLIKMYDKQNNFIGIGREICQAEGRAMLAPVKILSPG
NT seq
879 nt
NT seq
+upstream
nt +downstream
nt
atgcctaacggtatcattaatgtactaaagcctccaggcatgacatcacatgatgttgtg
tcttttgttcggaggcaatacggcataaaacgcgttggccacgcgggcaccttggaccct
gcggctgcgggggttttgccggtatttctaggtaacaccacccggcttattgaatatttg
gccgatgctgacaagagttatcgtgccgagattacttttggttttgcgaccgatactggt
gacgacacaggtcaaattattgccagtcaaccgtatacccgacctgaagcgaataaaata
aaagaagtattagcttcatttattggcgtaaatgaacaaattccgcccatgtattcggcg
atcaaggttgatggcaaaaagttgtatgaactagcgcgtttgggacagactgttgagcgt
aaaccgcgaaaaattgtaattagcaatattgcgcttgtcagagagtgcgaaaaaggtatt
gtgtttgacgtaacctgttctaaaggaacgtacattcggacgttatgtgctgatattggc
cgcaggttaaactgtttggcagtaatgagctttttagtcagaacgcgagttggcaacttt
tatttgaaccagtcattaacgctcgaagaaattatcgcccgaaaagaacaagctattcaa
aacgcggatagcgttcttactcatattcctgctataattttatctgagcaagattctttg
gcagtaaaaaacgggcgcagtattcagtgcgaaaaaacaggtgccgatttaataaaaatg
tatgataagcagaacaattttattggtatcggccgggagatatgtcaggctgaaggtcgt
gcaatgctggcaccggtaaaaatacttagtccgggctag
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