Sporomusa carbonis: SCACP_16920
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Entry
SCACP_16920 CDS
T10996
Symbol
rimO
Name
(GenBank) Ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
scao Sporomusa carbonis
Brite
KEGG Orthology (KO) [BR:
scao00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
scao03009
]
SCACP_16920 (rimO)
Enzymes [BR:
scao01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
SCACP_16920 (rimO)
Ribosome biogenesis [BR:
scao03009
]
Prokaryotic type
ribosomal protein modification factors
SCACP_16920 (rimO)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM_2
Motif
Other DBs
NCBI-ProteinID:
XEQ92841
LinkDB
All DBs
Position
1710731..1712059
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AA seq
442 aa
AA seq
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MLKAGFVSLGCAKNLVDTEIMLGILSDNNIAITDDPHDADILIVNTCGFIDSAKEESIST
IIQMADFKREGKCRGVIVAGCLGQRYQQDLLDELPEVSAIVGTGAWHRIMEAVHAVLAGE
RVLLIGDTDTLYDETMPRISTTPSYSAYVKIAEGCSNCCSYCVIPLVRGSYRSRPLESVV
NEVKRLAEQGVKEINLIAQDTTSYGRDRYGEPQLTALLNELVKIEGIIWIRLLYCYPKYF
NDELIELIANQPKICKYIDLPLQHADDEILSAMNRRDKRADIEKLLGKIRVAIPGVVIRT
SFIVGFPGETDKHFESLKQFMLEQKFERVGVFTYSQEEGTPAGIMKQQVPDNVKEERYHE
LMALQCQISEDLNRDMEGRVLTVLIEGHNSEQPDVAFGRSYREAPDVDGRIYVEDAADLQ
PGDLVRAEVVQGFTYDLLAERK
NT seq
1329 nt
NT seq
+upstream
nt +downstream
nt
atgctaaaagcaggatttgttagtttaggatgcgccaaaaaccttgtcgacaccgagatc
atgctgggaattttgtctgataataatatagctattaccgatgatcctcatgatgctgac
atattaattgttaatacctgcggttttattgattcagctaaagaagagtcaatctctact
attattcagatggctgatttcaaacgtgaaggtaaatgtcgtggtgttatcgtagctggg
tgtttaggacagcgttatcaacaggatctactggatgaattgcctgaagtatcggcaatt
gtcggtacaggagcttggcaccggattatggaagctgttcatgcagttctggccggcgag
cgggttttgctcattggtgacactgatacactgtatgacgaaactatgccgcgtatttcc
accacaccgtcttatagtgcatatgtaaaaattgctgaaggatgcagcaactgttgctca
tattgtgtaattccgctggtgcgcggcagttaccgcagccgcccgctggaatctgttgtg
aatgaagtaaaaaggctggccgagcagggagtaaaagagatcaaccttattgcccaagat
actaccagctatggccgggatcgttatggcgagccacaattgacagcattacttaatgaa
ttggtaaaaattgaaggtattatctggataaggttattatactgctatcctaaatatttt
aatgacgagcttattgaacttattgctaatcagcctaaaatctgtaagtatatcgatttg
ccgctccaacatgccgatgatgaaatattatcggcaatgaaccgccgtgacaagcgtgcc
gacattgaaaagttgttaggcaaaattcgggtcgctattcccggcgtagttatccgcacc
tcctttattgtcggtttcccgggtgagacggataaacactttgaatcgcttaaacaattt
atgcttgaacagaaatttgagagggttggtgtgtttacttattcccaggaagagggcact
cctgcaggaatcatgaaacaacaagtgcctgacaatgtcaaagaggaacggtatcatgaa
ctgatggcgttacagtgccagatttccgaagatttaaaccgtgacatggaaggccgggta
ctcacagtcttaattgagggccataattccgaacagcctgatgttgcgttcggcaggtcg
taccgggaagcgcctgatgtcgatggacgtatttatgttgaagatgccgcggatttacag
ccgggagatctagtgcgagcagaagttgtgcaggggtttacttacgatttgttggccgaa
agaaagtga
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