Sporomusa carbonis: SCACP_18740
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Entry
SCACP_18740 CDS
T10996
Symbol
ispH
Name
(GenBank) 4-hydroxy-3-methylbut-2-enyl diphosphate reductase
KO
K02945
small subunit ribosomal protein S1
K03527
4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase [EC:
1.17.7.4
]
Organism
scao Sporomusa carbonis
Pathway
scao00900
Terpenoid backbone biosynthesis
scao01100
Metabolic pathways
scao01110
Biosynthesis of secondary metabolites
scao03010
Ribosome
Module
scao_M00096
C5 isoprenoid biosynthesis, non-mevalonate pathway
Brite
KEGG Orthology (KO) [BR:
scao00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
SCACP_18740 (ispH)
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
SCACP_18740 (ispH)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
scao03011
]
SCACP_18740 (ispH)
Enzymes [BR:
scao01000
]
1. Oxidoreductases
1.17 Acting on CH or CH2 groups
1.17.7 With an iron-sulfur protein as acceptor
1.17.7.4 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase
SCACP_18740 (ispH)
Ribosome [BR:
scao03011
]
Ribosomal proteins
Mitochondria/ Chloroplast
Small subunit
SCACP_18740 (ispH)
Bacteria
SCACP_18740 (ispH)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LYTB
S1
S1_RRP5
Spt6_S1
S1_2
OB_RRP5_4th
S1_RRP4
Motif
Other DBs
NCBI-ProteinID:
XEQ93022
LinkDB
All DBs
Position
complement(1889173..1891134)
Genome browser
AA seq
653 aa
AA seq
DB search
MKIYMAEHRGFCYGVKRAVDMALNSVDKDRPVHTLGPIIHNPQMVSHLKHKGIESADKLE
DIPAGKVIIRSHGVGPDVYLKAKDKNLEIVDATCPHVKKAQQAAYELLKSGYQVVIVGEC
HHPEVQSIIAWSNNQAKVVETPDEANQLPHYPRLGVVSQTTFAADEFQTIISILKTKCDE
LKIERTICTATDLRQKAAIDLAKKVDVMIVVGGKSSANTARLASVCRDAGHKAYHIESAS
ELKSEWFAGVQSAGITAGASTPDWVIEEVYAKMEQMTMNEVVTPEPGSIVKGTVVGVRHD
EVFVDIGYKAEGVIHLSELAYPVPEQAADVVSQGQIIDVLVIDADSIDGQVKLSKIKADK
IIAWDKLEKAFSDKQPVEVKITEVVKGGLAAAVFGVKAFIPASQVDLKYVENLQSFVGQT
VQTLPIEVDREKQKAVLSRKQLLVAEKEAKEKELFAKLTVGQTITGKVSRLASFGAFVDV
GGVDGLIHISDLSWQRVKTPQEIVNVGAEVKVVVLKVDPETKKLSLSLKDIERDPWYDEA
DKLIVGSVVTGKVTKIAKFGIFVAIKNGLEGLVHISEVADRRVTNAEDVVNVGQQVAVKI
LSVDKEHKRIGLSMVQAEQDKERAEFSDYLAKQAPSPGVTLGDKFGHLFKRED
NT seq
1962 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatatacatggccgaacaccgtggcttttgctatggtgtaaaacgggctgttgat
atggcgctaaattctgttgacaaagatcgtccggtacataccttgggaccgattatccat
aatccgcagatggtcagccatctgaagcacaagggcattgaatcagcagacaaactggaa
gatataccggcaggtaaagttattatccgctcgcacggtgtaggaccggacgtatatctt
aaagctaaagacaaaaatctggagatcgttgatgctacctgtccgcatgtaaaaaaagcc
cagcaagccgcctatgaactgctgaagagcggttatcaggtcgtaattgtcggcgaatgc
caccacccggaagtccaaagtataattgcttggtcaaacaatcaggcaaaagtggtggaa
acacctgatgaggccaaccaattgccgcactatccccgattgggtgtagtttctcagact
acttttgccgctgatgaatttcagaccatcatcagtattttaaagacaaaatgtgatgaa
ttgaaaattgaacgcaccatctgtacagcaactgatttacgccaaaaggcagcaatagat
ctggcgaaaaaagttgatgttatgattgtcgtgggcggaaaaagcagtgcgaatactgcc
cgactggcttctgtatgccgggatgcaggccacaaagcctatcatattgaatcagccagt
gagttaaaatctgaatggtttgctggcgtgcaatctgccggaattacggctggtgcgtct
acacctgattgggttattgaggaggtatatgcaaaaatggaacaaatgacaatgaatgag
gtagttacaccggagcctggcagcatcgtaaaggggactgtagtgggtgtccggcacgac
gaagtttttgtcgacattggttataaggctgaaggagttatccacctgtccgaactggcc
tatcctgttccggaacaagccgcagatgttgtaagccaaggtcaaataatcgatgtattg
gtaattgacgctgacagtattgatggtcaggttaagctgtcaaaaatcaaagcagataaa
ataatcgcatgggataaattagaaaaggctttttcagacaaacagccggtagaagttaag
attaccgaagtcgtcaagggtggcctagccgcagcggtgtttggcgtgaaagcctttatc
ccggcatcgcaggttgatctgaagtatgttgaaaatttacagtcgtttgtcgggcagact
gttcaaactctacctattgaagtcgacagggagaagcaaaaggcagtattatcccgcaaa
caactgcttgttgcagaaaaagaggcaaaagagaaagagttgtttgcaaagttgacagta
gggcagactattaccggcaaagtaagccgtttggcaagttttggcgcatttgtcgatgtt
ggtggagttgatggtcttattcatatttcagacctttcatggcaacgtgttaaaactccg
caggaaatcgtaaatgttggtgctgaggttaaagttgttgtactcaaggttgaccctgaa
accaaaaagctgtcacttagccttaaggatattgagcgtgatccttggtatgatgaggcc
gataaattgattgttggctcggtagtgaccggcaaagttactaaaattgccaaatttggc
atatttgttgcaattaaaaacgggcttgaaggattggtacatatttcggaagtggctgat
aggcgggtgaccaatgctgaagatgtggtaaacgttggtcagcaggttgctgtcaaaata
ttaagtgttgacaaagagcataagcgcatcggtctcagcatggtacaggctgagcaggac
aaagagcgggctgaatttagcgattatttggctaaacaggctccatcgcctggtgttacg
cttggcgacaaatttggccatttatttaaacgggaggactaa
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