Sporomusa carbonis: SCACP_19800
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Entry
SCACP_19800 CDS
T10996
Name
(GenBank) hypothetical protein
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
scao Sporomusa carbonis
Pathway
scao03410
Base excision repair
scao03430
Mismatch repair
scao03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
scao00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
SCACP_19800
03430 Mismatch repair
SCACP_19800
03440 Homologous recombination
SCACP_19800
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
scao03400
]
SCACP_19800
DNA repair and recombination proteins [BR:
scao03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
SCACP_19800
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
SCACP_19800
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
SCACP_19800
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecJ_OB
DHH
DHHA1
Motif
Other DBs
NCBI-ProteinID:
XEQ93128
LinkDB
All DBs
Position
complement(1980508..1982580)
Genome browser
AA seq
690 aa
AA seq
DB search
MARLQKAWKLFPVKHELAAKLSRKLNISEFIAQTLINRGVTDEKSATQFLYSGSEYILNP
YLLKNMDIAVSRIVRAINSDEKITVYGDYDVDGITSCAIVYKTLSRLGANINFYIPDRQS
EGYGLNASALDGLINTGTKLLITVDCGISAVKEVSAVLDCIDIIITDHHQPPPELPPALA
IINPKQPGCPYPEKNLAGVGVAFKLCQALWQKYYGTENKFFDYLDIVAIGTIADIVPLTG
ENRVLVKLGLAQLPTTSNLGIKALLEVCGLAGKKIDSSNVGFAIAPRLNAVGRVSQATAG
VELLITDDQNYAHELATLLDEENSSRQAIEKLILAKAEDQLAEVDLNAAKVLVLAGEDWH
SGVIGIVASRLVDKYFKPVIMISIHDGYGKGSCRSIPAFDIYAALTRCSDLLTQFGGHRQ
AAGLTIPVENIPNLCYRLNAIAAETLSAADYVPVLNIDSFLPLEEISSAFIEQLACLEPY
GFGNPSPLFACRNVQFKEKRLIGQQSRHLKLKLNNTTVNDVIAWNMGELSDSLSCEENID
LVFVPNINEWQGHKNLQLIAHDIRQSLSSKEIKAKLDQIAPDRDCIRQVYLTIKEFNKTG
QYNLSLQHVSSKILENYQTFLPEQVVDMALTILTELNLLTIEVGTEGVVTICLKPSPLKK
LNLSDSPTFCKCLKMREEYSTQHIQFEEVH
NT seq
2073 nt
NT seq
+upstream
nt +downstream
nt
atggctaggctgcagaaagcatggaagttatttcctgtcaaacacgaactggctgctaaa
ctcagccggaagctcaatatatcagaatttattgcccagactctcattaaccggggtgtt
actgatgaaaaatcagctacccagtttttatattccggttcagaatatatcttgaatcca
tacttgttgaaaaatatggatatcgctgtaagtagaattgtacgagccatcaattccgat
gaaaagattactgtttacggagactatgatgtagatggaattacatcatgtgccattgta
tacaaaaccctaagccggcttggtgccaatattaacttttatatccctgacaggcaaagt
gaaggctatggccttaatgcttcggctttagatggtctcataaatacaggtactaaactg
cttattacagtagattgcggtattagcgcagtaaaagaggtttcagcggtattagattgt
attgacataatcataactgatcatcatcaaccgccgcctgaattgccgcctgcattagca
ataattaaccccaagcaaccgggttgtccgtaccctgaaaaaaacctggcgggagtcgga
gtggcctttaagttatgccaagcgttgtggcagaaatattacgggacggaaaataagttt
tttgactatcttgatattgtagctattggaacaattgctgacatcgtgcctcttaccgga
gaaaaccgggttttagtaaaacttggtttggcgcaattgccaaccaccagcaacttggga
attaaagccttgttggaagtatgtggtttagccggcaaaaaaatcgatagcagcaacgtg
gggtttgccattgcgccgcgcctcaatgctgttgggcgtgttagccaggctacggcaggt
gtagaactgttaattaccgatgatcagaactacgcacatgaactggccactcttttagac
gaagaaaactcatcccgtcaagccatagaaaagcttatacttgccaaggctgaagaccaa
cttgcagaagtagatttgaacgcagctaaagtactggtgctggctggcgaagattggcat
tcaggagttatcggcattgtagcttcacgactcgtggacaaatattttaaaccggtaata
atgattagtatacatgatggttatggcaaaggctcctgccgcagtataccagcgtttgac
atttacgcagcactcacccgttgttcagatttattaacccagtttggcggccaccgtcag
gctgcaggattgacaattcctgttgaaaatatacctaacctttgctatcgtctgaatgct
attgctgccgagacattatccgctgctgactatgttcccgtgcttaacattgattcattt
ttaccactggaagaaatcagtagcgcatttattgaacaactagcttgtcttgaaccctat
ggttttggcaatcccagcccgctatttgcttgtagaaatgtccaatttaaagaaaaacga
ctcattgggcaacaaagccgccacctgaaacttaagttaaataataccacagttaatgat
gtaatcgcctggaatatgggagaattatcagatagtcttagctgcgaagaaaatatagat
ttggtatttgtgccgaatattaatgagtggcaagggcataagaacctgcaactgatcgcg
catgatatccgtcaatcacttagcagcaaagagataaaagctaagctggaccagatagcg
cctgaccgcgactgcattagacaagtgtacctgactattaaagaattcaacaaaacaggc
caatataatttgtctttgcaacatgtttccagtaaaattcttgaaaattatcaaactttt
ttgcctgaacaagttgttgacatggctttaacgatactcacggaattaaatctgctgaca
atagaagttggaactgaaggagtagttactatctgcctcaagccatcaccactaaaaaaa
cttaatctatcagattcgcctacattttgtaaatgtttgaagatgcgtgaagaatattca
actcagcatattcagtttgaggaggttcattaa
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