Sporomusa carbonis: SCACP_20610
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Entry
SCACP_20610 CDS
T10996
Symbol
sigA
Name
(GenBank) RNA polymerase sigma factor SigA
KO
K03086
RNA polymerase primary sigma factor
Organism
scao Sporomusa carbonis
Pathway
scao02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
scao00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
SCACP_20610 (sigA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
scao03021
]
SCACP_20610 (sigA)
Transcription machinery [BR:
scao03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
SCACP_20610 (sigA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
Sigma70_r1_1
Exonuc_VII_L
Motif
Other DBs
NCBI-ProteinID:
XEQ93201
LinkDB
All DBs
Position
complement(2053262..2054368)
Genome browser
AA seq
368 aa
AA seq
DB search
MADKKNMPGEQVNELLHKGKKRGMLTYAEIMDTMQTEDMSPDEIDDMYEIFSNKGIEIVD
EVPDVEMIEGPDISEIEATAEEVDIDLTIPEGISIDDPVRMYLKEIGRVPLLTADEEIRL
AKRMEQGDEEAKRRLAEANLRLVVSIAKRYVGRGMLFLDLIQEGNLGLIKAVEKFDYNKG
YKFSTYATWWIRQAITRAIADQARTIRIPVHMVETINKLIRVSRQLLQELGREPSPEEVA
KAMDVSVERVREIMKIAQEPVSLETPIGEEEDSHLGDFIEDQDAPAPAEAASFMLLKEQL
EEVLETLTPREEKVLRLRFGLDDGRARTLEEVGQYFGVTRERIRQIEAKALRKLRHPSRS
KKLKDFLE
NT seq
1107 nt
NT seq
+upstream
nt +downstream
nt
atggccgataagaaaaatatgccgggagagcaagtcaatgagcttttacacaaaggtaaa
aaacgtggtatgctgacatatgctgaaatcatggataccatgcagaccgaagacatgagc
cctgatgagattgacgatatgtacgaaatcttcagtaataagggtattgaaattgttgac
gaagttccggatgttgaaatgattgaaggcccagacatttctgagattgaagcaacggcc
gaagaagtagatattgatctcaccattcctgaaggcataagtattgatgacccggttcgt
atgtatctaaaggaaattggccgggtaccgctgttaacggccgatgaggagattaggctg
gccaaacggatggaacagggtgatgaagaggctaaacgccgtcttgccgaagctaattta
aggcttgttgtaagcattgccaagcgttatgttggccgtggcatgttatttcttgatctc
attcaggaaggtaatttaggcctgatcaaggctgtagaaaagtttgactataacaaaggt
tataaatttagtacttatgcgacatggtggatacgccaggcaataactagggctatagct
gaccaagcccgtactatccgtattcctgttcatatggttgagacaatcaataagcttatt
agagtgtccaggcaacttctgcaagaattgggacgtgaaccttcgccagaggaagttgcc
aaggccatggatgttagtgttgagcgggtgcgggagattatgaaaattgcccaggaacct
gtgtctttagaaacgccaatcggcgaagaagaagattcccatttaggggattttattgaa
gaccaggacgctccggccccggctgaagctgcgtcattcatgctacttaaagaacagcta
gaagaagtgcttgaaacacttacgccacgcgaggaaaaagtactgcgacttagatttggc
ctggatgatggccgggcccgcacccttgaggaagtaggccagtattttggtgttactcgt
gagcgcatccgtcagatagaagctaaagcattgagaaaacttcgtcatccgagccgcagt
aaaaaattgaaggattttctagaataa
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