Sporomusa carbonis: SCACP_22140
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Entry
SCACP_22140 CDS
T10996
Symbol
polA_1
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
scao Sporomusa carbonis
Pathway
scao03030
DNA replication
scao03410
Base excision repair
scao03420
Nucleotide excision repair
scao03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
scao00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
SCACP_22140 (polA_1)
03410 Base excision repair
SCACP_22140 (polA_1)
03420 Nucleotide excision repair
SCACP_22140 (polA_1)
03440 Homologous recombination
SCACP_22140 (polA_1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
scao03032
]
SCACP_22140 (polA_1)
03400 DNA repair and recombination proteins [BR:
scao03400
]
SCACP_22140 (polA_1)
Enzymes [BR:
scao01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
SCACP_22140 (polA_1)
DNA replication proteins [BR:
scao03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
SCACP_22140 (polA_1)
DNA repair and recombination proteins [BR:
scao03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
SCACP_22140 (polA_1)
NER (nucleotide excision repair)
GGR (global genome repair) factors
SCACP_22140 (polA_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_polI_exo1
HHH_5
HHH_2
HHH
Motif
Other DBs
NCBI-ProteinID:
XEQ93342
LinkDB
All DBs
Position
complement(2176712..2179354)
Genome browser
AA seq
880 aa
AA seq
DB search
MPQRFIIIDGSSLVHRAFHALPMLRTASGLYTNAVYGFTTMLVKLMTDYKPDLMAVAFDK
GRVTFRTETYQQYKAQRQATPGELSEQFPLVRELLKALGITTIEQQGYEADDILGTLAEK
AARQSYEVVIVTGDRDALQLIGAQTKVLLTKKGISEMEVVDVAALKEKYGLTPSQIIDLK
GLMGDKSDNIPGVPGIGEKTAGKLLAEFGSLENILANIDHVSGKKIQENLRQYAEQAVLS
KQLATIVRDMPIEFNPEFFRINPDKQVMKELFDKFEFKSLLAKIDVLFPGNGNKDSGKVT
VAAVELPAAVIAAGRDDVAAVYAAAKQTGHISCYPQPAGHLPLAGLAGLAITCSDKTVYI
PADSEGWPVVFDLLADSDIELVTYDAKSLYNACKLNGTALNAKVSDVLIAAYLLEPTAAA
YPLDVLAEKYLGKTTNLPAGDKYLTAKPDFAVWASGIIGQMGTVLVDKLSASGLDKLFNQ
IEMPLVEVLSAMEFSGIKVDRMYLKEMAVNIAAKVEQLLNEIYILAGEEFNVNSTKQLGV
ILFEKLKLPVIKKTKTGYSTDAEVLEKLAGQHPLIDKLLEYRLLTKLKSTYLDGLEILIH
PETGRIHTTFNQTVTATGRLSSSEPNLQNIPIRSDIGRKIRELFVPGEGYQYIMSADYSQ
IELRILAHMAGDDSLLEAFRHNQDIHTRTAAEVFGVAMAEVTPEMRARAKAVNFGIVYGI
SDYGLSRDIGVSRKEAGHYINSYFAKYQGVKKYIDDVVAGAHRDGFVTTMFGRRRHLPDI
NSSNFNQRSFAERTAMNTPIQGAAADIIKIAMNRVYNALKTEGLKTRLLLQVHDELVLEV
TESELERVTTLVKQAMEQAVDLNVPLLAEVKTGSNWAEAK
NT seq
2643 nt
NT seq
+upstream
nt +downstream
nt
atgccccaaagatttattataattgatggcagcagtttggtacaccgggcatttcatgcg
ctccctatgctgcgcacagccagtgggctgtatactaatgctgtgtacggatttaccact
atgcttgttaaactgatgacagattataagccggatttaatggcggtggcttttgataaa
ggccgggtgacattccggacagaaacatatcagcaatacaaggcgcagcgacaggctacg
ccaggggaactgtccgaacagtttccactggtgcgtgagctgttaaaggcacttggtata
actactattgaacaacaaggttatgaagcagatgacattttgggaacactagccgagaaa
gcagctcggcaaagttacgaggttgttattgtaaccggcgaccgtgatgcgctacagctt
atcggagcacaaaccaaagtcctgcttactaaaaaaggtatatcagagatggaagttgtt
gatgttgccgccctgaaagagaaatatgggcttacgcccagtcaaattattgatttaaaa
ggtctgatgggagacaaatctgataatattcccggcgtgcctgggattggtgaaaaaact
gccggcaaattgttagctgaatttggttcgctggaaaatattttggctaacatagatcat
gtatcaggaaaaaaaattcaagagaatttgcggcaatatgccgagcaagccgttttgtca
aaacaattggctacaattgttcgcgatatgcccattgagtttaaccctgaattctttagg
attaatccagataaacaggttatgaaggagttatttgacaaatttgaatttaaaagtttg
ttggccaagatcgatgttttatttcctggaaacggcaataaggattcgggaaaggttaca
gtggcagccgtcgagttgccggccgcagttattgctgccggccgcgacgatgttgcagct
gtatatgcggcagctaagcaaacaggtcatataagctgttatccgcaaccggccggccat
ttgccactggccggtttggccggtcttgccattacttgcagcgataaaacggtgtatatt
ccggctgattccgaaggttggccggttgtttttgatttgctggccgacagtgatatagag
ctggtcacctatgatgctaaaagtttatataatgcctgcaaactgaatgggacggcgcta
aatgccaaagtgtccgatgttcttattgctgcctacctgcttgagccgacggcggcagcg
tatccgttggatgttctggcagaaaagtatctagggaaaacaacgaatttgcctgccggt
gataaatatttgactgctaagcctgacttcgccgtctgggccagtggcattattgggcag
atggggactgttcttgttgacaagctgtctgcttccggcttggataagctgtttaatcaa
atagaaatgccacttgtcgaagttttgtcggcaatggagttttccggcatcaaagtagac
cggatgtacctgaaagaaatggcggtaaacattgcggccaaggtagaacagttgctgaac
gaaatttatattctagccggagaagaatttaatgttaattcgactaaacagcttggtgtt
attttgttcgaaaaactcaagctgccggttattaaaaagacgaaaaccggttactctact
gacgctgaagtattggaaaagttagcaggacaacatccgcttattgataaactactcgaa
tacaggctgttgaccaaacttaaatcaacttatcttgatggcttggaaattttgatacac
cctgaaacgggaagaattcacaccacctttaaccagacggtcacggcaaccggcaggctg
agcagttcggagcctaacttgcagaacattcccatacgttcagatattggacgaaagata
agagaattatttgtcccaggtgaaggctatcaatatattatgtctgccgactactcacaa
atcgagcttagaatattggcccatatggccggtgatgacagtttgcttgaggcattccgc
cacaatcaagatatacatacgcggacagctgccgaagtatttggcgttgctatggcagag
gttacgccggaaatgagggccagagctaaagcagttaacttcggtattgtttatggaatc
agtgactatggcttatcgcgggatatcggtgttagccgcaaagaagccggtcactatatt
aatagctattttgccaaatatcagggtgttaaaaaatatatagacgatgttgtagccggt
gcccaccgggatggttttgtgactacgatgtttggacgacgccgtcatttacctgatatc
aatagcagcaacttcaatcaacggtcatttgctgaacgtacggccatgaatactccgatt
cagggcgcagctgccgatataatcaaaattgccatgaatagggtttataacgctcttaaa
actgaaggtctaaaaaccaggctactcctccaggttcatgacgagttagtgcttgaggtt
acagaatctgaacttgaacgggtaactacgcttgtcaagcaggctatggagcaagctgtt
gatctcaatgttccgttgttggccgaggtaaaaaccggcagcaattgggccgaagccaaa
taa
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