Sporomusa carbonis: SCACP_23100
Help
Entry
SCACP_23100 CDS
T10996
Symbol
recQ
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
scao Sporomusa carbonis
Pathway
scao03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
scao00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
SCACP_23100 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
scao03019
]
SCACP_23100 (recQ)
03400 DNA repair and recombination proteins [BR:
scao03400
]
SCACP_23100 (recQ)
Enzymes [BR:
scao01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
SCACP_23100 (recQ)
Messenger RNA biogenesis [BR:
scao03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
SCACP_23100 (recQ)
DNA repair and recombination proteins [BR:
scao03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
SCACP_23100 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
HTH_40
DEAD
Helicase_C
HRDC
RecQ_Zn_bind
ResIII
P-loop_SecA
Helicase_Sgs1
Motif
Other DBs
NCBI-ProteinID:
XEQ93436
LinkDB
All DBs
Position
complement(2277411..2279573)
Genome browser
AA seq
720 aa
AA seq
DB search
MLNTAQKLLKKYYGYDEFRPGQIKVISSLLSGKDTVAIMPTGAGKSLCFQIPAMLLPGVT
LVISPLISLMKDQVDALTEQGIPATYINSSLTNAEAGRRMHQMRAGRYKLVYVAPERLTA
DWFQVAVGELTISMVAVDEAHCVSQWGHDFRPSYRAIGPFIASLPARPVVGAFTATATPE
VKADIATLLALDRPVVHVTGFDRPNLFFSVVRGENKQAFIVNYVRANASQSGIIYAATRR
EVDGLYQLLCKKGYAAGRYHAGLSDEERISQQEKFLYDDIRVMVATNAFGMGIDKSNVRY
VIHYNMPKNMEAYYQEAGRSGRDGDPGECILLYGPQDPLLQRFLIDKSVEHPERKQHELK
KLQEMVDYCHTPDCLRHYILRYFGEQTADVCGCGRCGNCNADGEQVDITVDAQKVFSCIY
RMKERYGISVVADVLKGSKNKKVQQLGLDRLTTYGLMAERTLQDIKTLIQRLVATGYLRL
TESEYPVVKLAPEAVPVLKNQAQVWQKTFKERQHEADDTLFELLRQCRKRISERENVPPF
VVFADSTLKEMSQRRPADLSAMRQIKGVGEMKLQKYGQEFLAVITKYLAGNPAAGVTVAA
NLAALPAKKAAGKKSGSKADGEPSHLITLDMYRQGLDLPAIAKARDLAVSTVQNHLVRCA
GEGYAVDWDRLIPAEYEALIVEKIKELGGTQLKPLKEALPDEVGYAVIKAVLCKHFGVAQ
NT seq
2163 nt
NT seq
+upstream
nt +downstream
nt
atgcttaatacagcacaaaaattacttaagaaatattatggctatgacgagttccgacca
ggacaaatcaaagttattagcagcctattaagtggcaaggacactgtcgctattatgcct
accggggcgggaaagtctctgtgttttcagattccggccatgctgctgccgggagtgacc
ctggtcatttcgccgcttatttcgctgatgaaagatcaggtagacgcgctaaccgagcag
gggataccggctacctatattaatagttcgttgaccaacgcggaagccggcaggcgaatg
caccagatgcgggctggccgctataaactagtctatgtggcgcctgagcggctgactgcc
gactggtttcaggttgccgttggcgagcttactattagcatggtggctgttgatgaagcc
cattgtgtgtcgcaatggggtcatgattttcgtcccagctaccgggccattggtccattt
atcgccagtctgccggcacgtcctgttgttggcgcgtttaccgcgacagcaacgccggag
gtaaaagctgatattgctactttattggcgcttgaccgtccggtagttcatgttaccggc
tttgaccggcccaatttgttcttttccgtggttcgcggtgaaaataaacaggcttttatt
gtaaactatgtcagggctaacgccagccagtcaggaattatttatgccgccacccggcgg
gaagtggacggcttataccaactgctttgcaaaaaaggttatgccgccggtcgttatcat
gccggcttaagtgacgaagaacgcatatcacaacaggagaaatttctgtatgatgatatc
cgggtcatggtggccaccaacgcgtttggcatgggtattgacaaatcgaatgtgcgttat
gtcatacactacaatatgcccaaaaatatggaagcttactaccaggaggctggacggagc
ggccgggacggcgacccgggtgagtgcatattattatatggtccgcaagacccgttattg
caacggtttttgatcgataaatcggttgaacatcctgaacgtaaacagcatgaacttaaa
aaactgcaggaaatggttgactattgtcatacgcctgattgtttgcggcattatatttta
cgctattttggcgaacagacggctgatgtttgcggctgcggccgttgcggcaactgtaat
gccgatggcgaacaagtagatattactgttgatgcgcagaaagtcttctcttgtatttac
cgtatgaaagaacggtacggcatatcggtggttgccgatgtgctaaaaggttctaaaaat
aaaaaagttcagcagctgggattggaccggctgacaacttacggcttgatggctgaacgc
acgctccaagacatcaagacactgattcaacggttggtggctacgggttatttgcggctg
accgagagtgagtatccggtggttaaactggcgccagaggcggtgccggtattgaaaaac
caggcccaagtgtggcaaaagacgtttaaagagcgtcaacacgaggccgacgatacttta
tttgaacttttgcgtcaatgccggaaacgtatctcggaacgggaaaatgtaccgcctttt
gtggtatttgccgacagtactctaaaagaaatgagccagcgtcgcccggcagatttgtcg
gctatgcggcaaatcaaaggtgttggtgagatgaaactgcaaaaatatggccaagaattc
ctggcggtcattaccaagtacttagccggtaacccggccgcaggtgttaccgtagccgcc
aatctggcggctctgcctgccaaaaaagctgccggtaaaaaatccggcagcaaagcggat
ggggagccaagtcatttaataacactggatatgtaccgtcaggggcttgatcttccggca
attgctaaggcacgggatttagctgtcagcacggtacagaatcacctagtccgttgtgcc
ggtgaaggttatgccgtcgactgggacaggcttattccggcagagtatgaagcattgatt
gttgaaaaaataaaagaattgggtggaacccagctgaagccactcaaagaagctttgcct
gacgaggtcggatatgctgttatcaaagcggtattgtgcaagcatttcggtgtggcacag
taa
DBGET
integrated database retrieval system
