Sporomusa carbonis: SCACP_31780
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Entry
SCACP_31780 CDS
T10996
Symbol
degU_3
Name
(GenBank) Transcriptional regulatory protein DegU
KO
K07692
two-component system, NarL family, response regulator DegU
Organism
scao Sporomusa carbonis
Pathway
scao02020
Two-component system
scao02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
scao00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
SCACP_31780 (degU_3)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
SCACP_31780 (degU_3)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
scao02022
]
SCACP_31780 (degU_3)
Two-component system [BR:
scao02022
]
NarL family
DegS-DegU (multicellular behavior control)
SCACP_31780 (degU_3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Response_reg
GerE
HTH_40
Sigma70_r4_2
Sigma70_r4
HTH_24
DUF6115
Sigma70_ECF
CENP-B_N
HTH_38
HTH_23
HTH_11
Mga
B12-binding
DUF433
HTH_10
HTH_29
HTH_20
Motif
Other DBs
NCBI-ProteinID:
XEQ94279
LinkDB
All DBs
Position
complement(3105651..3106322)
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AA seq
223 aa
AA seq
DB search
MPIKLLIADDHALLRQGIKNVLSLEPDFLVIGEAADGEETIKQVESLKPDIILLDVNMPR
LNGLEVTRRLKAADANVKVIILTIHDDEGYVLEVIKAGAVGYLLKDIEPGMLVKAIRTVF
EGQSFIYPTLAQRLFGEISRQAEKKHETAAMLERRKEERLTYREVEVLQLIGQGMSNQEI
AQKLYLSEKTVKNHLTNIFRKINVVDRTQAVLYAIKHKIVVLE
NT seq
672 nt
NT seq
+upstream
nt +downstream
nt
ttgccgattaaactcttaattgccgatgatcatgcgctgttaaggcaagggatcaaaaat
gtgctgtcattggaaccggattttctggtaattggtgaggcggctgacggagaagagacc
attaaacaggtcgaaagccttaagcctgatataattttacttgatgtcaacatgccgcgc
ctcaacggcttggaggtcacccggcggctcaaggctgctgacgccaatgtaaaagttatc
atccttaccatccatgatgacgaagggtatgtgctggaagtcatcaaagccggtgcggtg
gggtatctgctgaaagatatcgaaccaggtatgttggttaaagccattcgtaccgttttt
gaggggcagtcgttcatttatccgacgttggcgcagcgcttgtttggcgaaatttcccgc
caggcggagaaaaagcatgagacggcggccatgctcgaacgccgcaaggaagaacggttg
acataccgagaggttgaagtgttgcagcttatcggtcaggggatgagtaatcaggagatt
gcgcaaaaactttatctgagtgaaaaaacggtgaagaatcatcttactaatattttccgt
aagattaatgttgttgatcgtactcaggctgtactttatgcaataaagcacaaaattgtg
gttttggaataa
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