Sporomusa carbonis: SCACP_34520
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Entry
SCACP_34520 CDS
T10996
Symbol
rocR_3
Name
(GenBank) Arginine utilization regulatory protein RocR
KO
K06714
arginine utilization regulatory protein
Organism
scao Sporomusa carbonis
Brite
KEGG Orthology (KO) [BR:
scao00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
scao03000
]
SCACP_34520 (rocR_3)
Transcription factors [BR:
scao03000
]
Prokaryotic type
Helix-turn-helix
Other families
SCACP_34520 (rocR_3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
HTH_8
AAA_5
Mg_chelatase
HTH_30
GAF_PdtaS
AAA
bpMoxR
AAA_19
HTH_1
HTH_50
MCM
AAA_2
AAA_3
Motif
Other DBs
NCBI-ProteinID:
XEQ94553
LinkDB
All DBs
Position
3407546..3408955
Genome browser
AA seq
469 aa
AA seq
DB search
MRDWEDRLLFLETMTGYIQDALYVIDKHGNELFYNNKIERFEPAHRQNMLAELLAVFKSG
QPVLDKYQKYMTVDHREVHMLSSFVPIKRNGEIIAVCSINKNITEMANLLNKVIDLQGQL
QHHTQTAKQSGTGATYTFSDILGTSSQIQAVIDKAKKAALGCAPVLLTGETGTGKELFAQ
SIHNYGQAAAEPFVAVNCAAIPETLLEGIIFGTVKGAFTGAENTPGLLEQAGGGTLFLDE
VNSMSLVLQSKLLRALEEKRVRRLGDRKEIPIYCRIISATNVDCRTLLREGKMREDFYYR
IAVVNLTIPPLRERSEDVLLLAENLLKRFNKIYGKRITSLAPEVASIFAAHKWPGNVREL
YHVLEYAVSFGDNETVLTPNHLPDYLRNFYSPPQYFSPPANLPMSALPDILAATEKRLIL
NALALHKGNITKAAETLGIHRQNLQARMKKLNILKKVNFFEASSCESEF
NT seq
1410 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgattgggaagataggcttttgttcctggaaactatgaccggatatatccaggat
gccttatatgttattgataagcatggcaatgaactattctacaataataaaattgaacgg
ttcgaaccggctcaccgccaaaatatgctggccgaattactggcggtatttaaaagtggc
caaccggtcctggataagtatcaaaagtatatgacggtcgatcaccgggaagtgcatatg
ctgtccagttttgttccgattaagcgcaatggtgaaattatcgctgtttgttcgataaat
aaaaatataaccgaaatggcgaatttactcaataaagtaatcgaccttcaaggacagttg
cagcaccatacgcagacagctaagcaatccggaaccggcgctacttatactttcagcgac
atcttgggtaccagcagccaaatacaggcagtaattgacaaagccaaaaaagcggcactc
ggctgtgccccggtgttgctaacaggtgaaaccggcacaggtaaagaattatttgcccaa
agtatccacaattacggtcaagctgctgccgaaccgtttgtagcggtaaactgcgcggca
attcctgaaactctgctggaaggaatcatatttggcacagtcaaaggagcttttaccggc
gccgagaacacccccggactattggaacaggcaggcggcggtaccctctttttggatgaa
gttaacagcatgagtctagttttgcagtctaaactcttaagagcactggaagaaaagcgg
gtccgcaggctgggcgaccgtaaggaaattcccatttactgccggatcataagcgcaacc
aatgttgattgccggacactgttacgtgaaggcaaaatgcgcgaagacttttattaccgg
attgctgttgtcaatctaaccattcctcccctgcgcgagcggtcagaagacgtgctgctg
ctggcagaaaatttattaaaacggtttaataaaatttatggaaaacgtattacctccctg
gcaccggaagtagcaagcatctttgctgcgcataaatggccgggtaacgtccgggagctg
tatcacgttctggaatatgcggtaagctttggcgacaatgaaacagttttaacacctaac
cacttgccggattacctacgcaacttctactccccgccccaatacttcagcccgccggca
aacttacccatgtccgcgttacccgatatccttgccgctacggaaaaacgtctcattctt
aatgcccttgccctccataaaggcaatattacgaaagctgccgaaaccctgggaatacac
cggcaaaacctgcaagcccgcatgaaaaaattgaatatcctcaagaaagtaaattttttc
gaagcgtcatcgtgcgagtccgaattttaa
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