Sporomusa carbonis: SCACP_38860
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Entry
SCACP_38860 CDS
T10996
Symbol
udg
Name
(GenBank) Type-4 uracil-DNA glycosylase
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
scao Sporomusa carbonis
Pathway
scao03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
scao00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
SCACP_38860 (udg)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
scao03400
]
SCACP_38860 (udg)
Enzymes [BR:
scao01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
SCACP_38860 (udg)
DNA repair and recombination proteins [BR:
scao03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
SCACP_38860 (udg)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
DUF3072
Motif
Other DBs
NCBI-ProteinID:
XEQ94986
LinkDB
All DBs
Position
3888008..3888682
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AA seq
224 aa
AA seq
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MFSSHSELETALLLCNKCKLCKDKNHGPTSFNGTSDSPLAIVGEGPGGVEDEYGVPLVGP
SGQLLDKALASVGITRDKIYTSNTIKCRPLGNRTPTIEEGQFCANHWLDEELRFVQPKVI
IALGSVALKYLYGPEKRITKDRGQWFTTKYDIPAIATYHPAYLLRLTGKELVKAKWEVYY
DLKAAVEKCQELAPGYDFKSSVPPDLLKLYASRRIDRLGKSIRK
NT seq
675 nt
NT seq
+upstream
nt +downstream
nt
gtgttttcttcacattctgagcttgaaacagcattgctactatgtaacaaatgcaaatta
tgcaaagacaaaaaccacggtccaacatcgttcaatggcacgtcggatagtccgcttgcc
attgttggggaagggccgggcggagtggaggatgagtacggtgtgccgctggtgggtcct
tccggacagcttcttgataaagcgttagccagtgtcggaattacaagagataaaatttac
acatctaatacaattaaatgccgcccattaggaaatcgaacccctacgatagaagaaggt
cagttctgcgcaaatcactggcttgacgaggaacttcgctttgttcagcccaaagtcatc
atagctctcggcagtgtcgcactgaagtacttgtatggaccggaaaaacgcattaccaag
gaccgcggccagtggttcaccaccaaatacgacatccccgctattgcaacctatcatccc
gcttatcttctgcgactaacaggcaaagaactggtaaaagccaaatgggaagtatattat
gatctcaaggcggcagtggaaaagtgccaggaacttgctcccggatatgattttaaatct
tccgttccgccagacttattaaaactatacgcctcgcggagaattgatcgactaggcaaa
agtatacgtaaataa
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