Staphylococcus capitis subsp. capitis: AYP1020_0187
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Entry
AYP1020_0187 CDS
T03970
Symbol
csd_1
Name
(GenBank) putative cysteine desulfurase
KO
K11717
cysteine desulfurase / selenocysteine lyase [EC:
2.8.1.7
4.4.1.16
]
Organism
scap
Staphylococcus capitis subsp. capitis
Pathway
scap00450
Selenocompound metabolism
scap01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
scap00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
AYP1020_0187 (csd_1)
Enzymes [BR:
scap01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.1 Sulfurtransferases
2.8.1.7 cysteine desulfurase
AYP1020_0187 (csd_1)
4. Lyases
4.4 Carbon-sulfur lyases
4.4.1 Carbon-sulfur lyases (only sub-subclass identified to date)
4.4.1.16 selenocysteine lyase
AYP1020_0187 (csd_1)
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Gene cluster
GFIT
Motif
Pfam:
Aminotran_5
Cys_Met_Meta_PP
Aminotran_1_2
DegT_DnrJ_EryC1
Beta_elim_lyase
Pyridoxal_deC
SelA
OKR_DC_1
DUF5779
Motif
Other DBs
NCBI-ProteinID:
AKL91337
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Position
178556..179797
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AA seq
413 aa
AA seq
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MAEKAFNVNNVIKDFPILEQQVNGKRLAYLDSTATSQTPVQVLNVLDDYYRRYNSNVHRG
VHTLGSLATDGYESARETVRRFINAKYFEEIIFTRGTTASINIVARSYGDANVEEGDEIV
VTEMEHHANIVPWQQLAKRKNASLKFIPMTDEGELRVDDIKETINEKTKIVAIAHVSNVL
GTINDVKTIAEIAHEHGAIISVDGAQAAPHMALDMQDIDADFYSFSGHKMLGPTGIGVLY
GKRQLLKNMEPIEFGGDMIDFVSKYDATWADLPTKFEAGTPLIAQAIGLGEAIRYIEDLG
FDAIHKHEKELTEYAYDQMSAIEGLEIYGPPKDRRAGVITFNLSDIHPHDVATAVDTEGV
AVRAGHHCAQPLMKWLNVSSTARASFYVYNTKEDIDQLVQALKQTKEFFSYEF
NT seq
1242 nt
NT seq
+upstream
nt +downstream
nt
gtggccgaaaaagcttttaatgtaaacaatgtcattaaagatttcccgattcttgaacaa
caagttaacggaaagcgcttagcgtatcttgattcaactgctacaagtcaaacgcctgtt
caagtgttaaatgtattagatgattattatagacgttataactctaacgtccaccgtggt
gttcacactttaggatcactagcaacagatggctatgaaagtgctcgtgaaactgttcgt
cgatttattaatgctaaatattttgaagaaattattttcactagagggacaactgcatca
atcaatattgttgcacgtagttatggtgacgctaacgtcgaagaaggcgatgaaatagtt
gtgactgagatggaacatcacgcgaatattgttccatggcaacaattagccaagcgtaaa
aatgcatctctaaaatttatcccaatgactgatgaaggcgaacttagagtagatgacatt
aaagaaacaataaatgaaaaaactaagattgtagctattgcacatgtatctaacgtctta
ggtacaattaatgatgttaaaacgattgcagagatcgcacatgaacatggtgctattatt
agtgttgatggcgctcaagccgcaccacatatggccttggatatgcaagatattgatgct
gatttttatagttttagtggacataagatgttaggacctacaggtattggtgttttatat
ggtaaacgtcaattacttaaaaatatggaacctatagaattcggtggagatatgattgat
tttgttagtaaatacgatgctacttgggccgatttaccaacaaaatttgaagctggaaca
cctcttattgcacaagcaattggtttaggtgaagcgattcgttacattgaagaccttgga
tttgatgctatacacaagcatgagaaagagctgactgagtatgcatacgatcaaatgtct
gcaattgaaggtttagaaatatatggaccacctaaagatcgtcgagcaggtgtgattact
ttcaatctttcagatattcaccctcatgatgttgcgacagcagttgatactgaaggtgtg
gctgtccgagctggacatcactgtgcacaaccactaatgaaatggcttaatgtatcctca
actgcacgagcaagtttctatgtttacaacactaaagaggatattgatcagttagttcaa
gcattgaaacaaacgaaggagtttttctcttatgaattttaa
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