Staphylococcus capitis subsp. capitis: AYP1020_0236
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Entry
AYP1020_0236 CDS
T03970
Symbol
addB
Name
(GenBank) ATP-dependent helicase/deoxyribonuclease subunit B
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
scap
Staphylococcus capitis subsp. capitis
Brite
KEGG Orthology (KO) [BR:
scap00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
scap03400
]
AYP1020_0236 (addB)
Enzymes [BR:
scap01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
AYP1020_0236 (addB)
DNA repair and recombination proteins [BR:
scap03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
AYP1020_0236 (addB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ADDB_N
PDDEXK_1
UvrD_C
Glycoprot_B_PH1
Anamorsin_N
Motif
Other DBs
NCBI-ProteinID:
AKL91386
LinkDB
All DBs
Position
225690..229157
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AA seq
1155 aa
AA seq
DB search
MELNTYIGRAGTGKSASMLNYIKNEMKHDPLGDPIVLIAPTQSTFQLEQAFVNDSELNGS
LRTEVLHFERLSHRIFQEVGGYTEQKLSKAAMQMMIYHIVQQYDSELKLYRSQSKYYGFS
EKLTEQIQDFKKYSVTPDHLDQFITEHQLQTRTQHKLEDITLIYKELESRMSGEFITTED
SLERFIDQMSKSEWLKRAEIFIDGFYNFSTLEYRIIEALVQHAKSVTVLLTTDGNQDPFS
LFRKPSEVLTHLEDIANQLNIHLNKTLFKQKFRFENDDLKHLESDFDALQMTPQSHSNHV
EILESSNMREEVNELARRIIRDVRDHHLRFQDIAILYRDESYAYLFESIFSLYDIPFNID
TKKSMSHHPIMEMIRSLIEVIQSNWNINAMLRLFKTNVLTSQFKNSSYLIDLLENFALER
GVYGKRWLDEEVFHVDQFNKMGRKSHALTPQEKETYEEVVRLKNNVIDKVLYFEKAMSDA
TTVRDFATAFYESMEYFELPNQLMTERDELDVEGKHQQAEEIDQIWNGFIQILDDLVTVF
DTQEMTLKQFLEVFDIGLEQLEFVMIPQTLDQVSIGTMDLAKVDNKRHIYMVGMNDGSLP
QPVSSSSLITDEEKKYFEQNAQIELSPTSDILQMDEAFVCYIAMTRAREKVTFSYSLMGN
SGDEKEISPFLSQIKDLYHHLDIVNIQQEHEEQPISLMQHVHQTKIELFDALRTWLDHED
VDIRWLDAYQVIRDDEQLNDGLDYLITSLTYDNETVQLNETLTKQLYGTTINASVSRFEG
YQQCPFKHYASHGLRLNERSKYELQNFDLGDIFHSVLKHISDRVEGDFKNLDRKKIKALT
EEALELILPKVQFNLLNSTAYYKYLSRRIGSIVETTLNALKYQTGFSKFIPQRFETGFRK
SPRNKDELVAQPLHTKQGIPINIRGQIDRIDTYTKGDHSYVNIIDYKSSTGSATLDLTKV
YYGLQMQMMTYMDIVLQNKDRLELTDIVKPGGLLYFHVHEPRIKFDNWSKIDEDKLNKEL
IKSFKMSGLVNSDEEVIDALDKRLEPSFNSDIAPIGLTTKGAISKNTSRVANENVIRQFI
QHNKNNFIDTATHIMDGHTEVAPLKYKNTLPCQFCSYQSVCHVDSMIDSKRYRTVDESIK
PIELIQNMIDEGGDQ
NT seq
3468 nt
NT seq
+upstream
nt +downstream
nt
atggaattaaatacatatatcggtagagctggtacgggcaaatcagcttcgatgttaaat
tatataaagaacgaaatgaaacatgatcctttaggcgatcccatcgtattaatcgctcca
actcagagtacgtttcaattagaacaagcttttgtaaatgattcagaacttaatggaagt
ttgagaacagaagtccttcactttgaaagattaagtcatcgtatttttcaagaagtaggg
ggatatacagaacaaaaattatctaaagctgctatgcaaatgatgatttatcatatcgtt
caacaatatgattcagaacttaaattataccgttctcaatctaaatattatggctttagt
gaaaaacttactgaacagattcaagattttaaaaaatatagtgttacaccggaccattta
gatcaatttattacagaacatcaattacaaacaagaacgcaacataaactagaagatatt
actctaatttataaagaattagaatctcgcatgagcggtgaatttataactactgaggat
agtttagaacgttttattgaccaaatgtctaaatctgagtggcttaaacgagcagaaata
tttatcgatggtttctacaacttctcaacacttgaatataggattattgaagctttagta
caacatgctaagagtgtcacagttctactaacaacagatggtaatcaagacccattcagt
ctatttagaaagccatcagaagttttaacccatcttgaagacattgcgaatcaattaaat
attcacttaaataaaaccttatttaaacaaaagtttcgatttgaaaatgatgatctcaaa
catttagaaagtgattttgatgctttgcaaatgacacctcaatctcattcaaatcatgtg
gaaatacttgaatcttcaaatatgcgtgaagaagtaaatgaattagcaagacgaattatt
agagatgttcgtgatcatcatttgagatttcaagacattgctatcttatatcgtgacgaa
tcatatgcatatttattcgaatctattttttctttatacgacattccctttaatatcgat
actaaaaagtcaatgtcacaccatccaattatggaaatgattcgttctttaatagaggtc
atacagtcaaattggaatattaacgcaatgttgcgtttatttaaaacaaatgtactaact
tcacaatttaagaatagtagctacttaatagatttattggagaatttcgcattagagcgc
ggtgtatatggtaaacgttggttggatgaggaagtatttcatgttgaccaatttaataaa
atgggacgtaaatctcatgctctaacccctcaagaaaaagaaacttacgaagaggtagtt
cgtttaaagaataacgtcattgataaagttctttactttgaaaaagcgatgagtgacgct
accactgtgagagatttcgcgactgctttttacgaaagtatggaatattttgagctgcca
aaccaactcatgactgagagagatgagttagatgtagaaggtaagcatcaacaagcggag
gaaatcgatcaaatttggaacggatttattcaaattttagatgatttggtaacagttttt
gatactcaagagatgactttgaaacaatttcttgaagtgtttgatataggattagagcaa
ctagaatttgtcatgataccacagaccttagatcaggtaagtatcggtacaatggatttg
gctaaggtcgataataaacgacatatatacatggtaggtatgaatgatggttcattacct
caaccggtatcttcatctagcttgattacagatgaagaaaagaaatattttgaacaaaat
gcacaaattgaactaagtccgacatcagatattttacaaatggatgaagcatttgtttgt
tatattgctatgacacgcgcacgagaaaaagtaactttttcatatagtttgatgggaaat
tcaggcgatgaaaaagaaataagtccatttttatcacaaattaaagatttatatcatcat
ttagatatagttaatattcaacaagaacatgaagaacaaccaataagtcttatgcaacat
gtgcatcaaactaaaattgaattatttgatgcattgcgtacatggttagaccatgaggac
gtggatataagatggctagatgcataccaagtgattcgagatgatgagcaattaaatgat
ggattggattatcttatcacttctctaacttatgataatgaaacagtacaattaaatgag
acactcacaaagcaattgtatggaacaactattaatgcaagtgtgtcacgttttgaaggc
tatcaacaatgtccatttaagcattatgcctcccatggtttaaggttaaatgaacgttcg
aaatatgaattacaaaactttgatttaggagatatattccattcagtgctcaaacatatt
tctgaccgtgtagaaggtgactttaaaaacttagatcgtaagaagattaaagcgctaact
gaagaagcattagagttgatattgcctaaagttcaattcaacttattgaattcaacagcc
tactataagtatttatctagaagaataggttctatagtagaaacaactttaaatgcatta
aagtatcaaacaggcttttcaaaatttataccgcaaaggtttgagacaggattccgaaaa
tcacctagaaataaagatgaattagttgcacaacctctacatactaaacagggaatccca
attaacataagaggtcaaatcgatcggattgatacgtatactaaaggcgatcacagttat
gtaaatatcattgattataaatcttcaactggtagtgcgactttagatttaacgaaggtg
tactatggtttgcaaatgcaaatgatgacttacatggacatcgtcttacagaataaagat
agattagaacttactgatatcgttaaacctggtggattactttatttccatgttcatgaa
ccacgtattaaatttgataactggtctaaaattgatgaagataaattaaataaagaacta
attaaaagtttcaaaatgagtggtcttgtaaatagtgatgaggaagtaatagatgcttta
gataagcgtttggaaccaagctttaattcagatatcgccccaattggtttaactactaaa
ggtgccataagtaagaatacgagtcgtgtagcgaatgaaaacgttattcgtcaatttatt
cagcacaacaaaaataactttatcgatacggctactcacattatggatggccatacagag
gtagcccctttaaaatataaaaatactttaccatgtcaattctgtagttatcagtcagta
tgccatgtggatagtatgatagatagtaaacgttatagaactgtagacgagtctattaaa
cctatagaattaatccaaaatatgattgacgaaggtggtgaccagtga
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