Staphylococcus capitis subsp. capitis: AYP1020_0489
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Entry
AYP1020_0489 CDS
T03970
Symbol
pbpB
Name
(GenBank) Penicillin-binding protein B
KO
K12552
penicillin-binding protein 1 [EC:3.4.-.-]
Organism
scap
Staphylococcus capitis subsp. capitis
Pathway
scap00550
Peptidoglycan biosynthesis
scap01100
Metabolic pathways
scap01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
scap00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
AYP1020_0489 (pbpB)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
AYP1020_0489 (pbpB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
scap01011
]
AYP1020_0489 (pbpB)
Peptidoglycan biosynthesis and degradation proteins [BR:
scap01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
AYP1020_0489 (pbpB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
PASTA
Motif
Other DBs
NCBI-ProteinID:
AKL91636
LinkDB
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Position
473705..476050
Genome browser
AA seq
781 aa
AA seq
DB search
MPKRKIKIKKNKIGAVLLVGLFGLLFFILVLRFSYIMVTGHSNGQNLVMKANEKYLVKNS
EQPERGKIYDRNGKVLAEDVERYKVVAVVDKKASQNSKKPRHVVDKKKTAKQLSKVIDMK
ASDIEKRLNQKKAFQVEFGQKGTNLTYQDKEKIEKMNLPGVSLYPETERFYPNGNFASHL
IGMAQKDPDTGQLNGALGVEKIFNSYLNGTQGTLKYIQDIWGYIAPNTKKEQTPKRGDDV
HLTLDSNIQVFVEEALDGMVEKYAPKDLFAVVMDAKTGEILAYSQRPTFNPETGKDFGKK
WANDLYQNTYEPGSTFKSYGLAAAIQEGKFKPNEKYKSGHRDIMGSEISDWNKEGWGNIP
MTLGFTYSSNTLMMHLQDLVGADKMKSWYERFGFGKKTDGMFDGEASGHVAWANELQQKT
SAFGQSTTVTPVQMIQAQSAFFNKGNMLKPWFVNSIDNPVTKKNFYSGKKEYAGKPISKD
TADKVEKELDKVVNSKQSHAMNYRVKGYDIEGKTGTAQVADSNGGGYVKGENPYFVSFIG
DAPKKNPKVIVYAGMSLAQKNDEEAYEMGVSKAFKPIMENTLKYLNVGKSSDSASKADYS
KVPNVEGQETQKAEDSMNAQSLKPVTIGSGKQIKSQSVKAGTKILPHSKVMLLTDGDITM
PDMTGWTKEDVLAFEDLTHIKVSTKGNGFVTNQSITKGQALKNKDKVEVTLSADKTDDSE
DDSNATEASENSKDESKSKDKNSKQDSSSSSKSESKDSSSSDSKKDSNSNSKNNSSSSDD
S
NT seq
2346 nt
NT seq
+upstream
nt +downstream
nt
atgccgaagcgaaaaattaaaattaaaaaaaataaaataggggcagtccttctagttggt
ttattcggactgctcttttttatattggttttaaggttctcatatattatggtaactggt
cattcaaatggtcagaatcttgtgatgaaggcaaatgaaaaatacttagtaaaaaattcc
gagcaaccagagcgtggtaaaatttatgatcgcaatgggaaggttcttgcagaagatgtt
gaaaggtataaagttgttgcagttgtcgataaaaaggcaagtcaaaacagtaaaaagcca
cgtcacgtagtagataagaagaaaacagctaaacaattatctaaagttatagatatgaaa
gcttctgatattgaaaaacgactcaatcaaaagaaagctttccaagttgagtttggtcaa
aaagggactaacttaacttatcaagataaagaaaaaattgaaaaaatgaatttacctggg
gtttcattatatcctgaaacagaacgtttctatcctaacggaaactttgcctctcattta
attggtatggctcaaaaagaccctgacacaggacaacttaatggtgctttaggtgttgaa
aaaatctttaatagctacttaaatggaacgcaaggtacgcttaaatatatccaagatatt
tggggttatattgctcctaatactaaaaaagaacaaactcctaaacgaggagacgatgtt
catttaacgcttgattctaatattcaagtctttgttgaagaagctttagatggcatggta
gagaaatatgcgcctaaagatttatttgcagttgtaatggacgctaaaacaggtgaaata
ctcgcttatagtcaacgacctacctttaaccctgaaacaggtaaggattttggtaaaaaa
tgggctaatgatttataccaaaatacgtatgaaccaggttctacattcaagtcttatgga
ttagctgctgctatccaagaaggtaaatttaaacctaatgaaaaatataaatctggacac
agagacattatgggttctgagatctcagattggaataaagaaggttggggcaatatacct
atgactctaggcttcacctattcatctaacacattaatgatgcatttacaagatttagtt
ggagcagataagatgaagtcatggtatgaacgttttggctttggtaagaaaacagatgga
atgtttgatggagaagcatcaggccacgtagcttgggctaatgaattacaacaaaaaaca
tctgcgtttggacaatctacgactgttacacctgtacagatgattcaagcacaatcagca
tttttcaataaaggtaatatgttaaaaccttggtttgtaaatagcattgataatcctgtc
actaagaaaaacttctatagtggtaaaaaagagtacgcaggaaaaccaatttcaaaagat
actgctgataaagttgaaaaagagttagacaaagttgttaatagtaaacaaagtcatgcg
atgaactatcgcgttaaaggttacgacatcgaaggtaaaactggtaccgctcaagtagca
gattcaaatgggggcggatatgttaaaggtgaaaatccttactttgtaagctttataggt
gacgcgccgaagaaaaatcctaaagtcatcgtttacgcgggtatgagtttagctcagaaa
aatgatgaagaagcttacgagatgggtgtaagtaaagcatttaaacctattatggaaaac
acactcaagtatctcaatgtaggtaaatcaagtgattctgcatctaaagctgattacagt
aaggtacctaacgttgaaggtcaagaaacacaaaaagcagaagatagtatgaatgctcag
tcgcttaaaccagttactataggtagtggtaagcaaattaaatctcaatctgtcaaagca
gggactaagattttacctcatagtaaagtaatgttacttacagatggtgatatcactatg
ccggatatgacaggttggacaaaagaagatgtactcgcatttgaagacttaacacatatt
aaagtttccactaaaggtaatggttttgtaactaaccaaagtattactaaaggccaagcg
ttgaaaaacaaagataaagtagaagtgacattatctgctgataaaactgatgatagtgaa
gatgattcaaatgcaacagaagctagtgaaaattcgaaagatgaaagtaagtctaaagat
aaaaactctaaacaagattcaagctcatcttctaaatcagaatcaaaggatagttcaagt
tctgactctaaaaaagactccaatagtaattcaaaaaataattcaagttccagcgatgac
agctga
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