Staphylococcus capitis subsp. capitis: AYP1020_0573
Help
Entry
AYP1020_0573 CDS
T03970
Symbol
polC_1
Name
(GenBank) DNA polymerase III PolC-type
KO
K03763
DNA polymerase III subunit alpha, Gram-positive type [EC:
2.7.7.7
]
Organism
scap
Staphylococcus capitis subsp. capitis
Pathway
scap03030
DNA replication
scap03430
Mismatch repair
scap03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
scap00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
AYP1020_0573 (polC_1)
03430 Mismatch repair
AYP1020_0573 (polC_1)
03440 Homologous recombination
AYP1020_0573 (polC_1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
scap03032
]
AYP1020_0573 (polC_1)
03400 DNA repair and recombination proteins [BR:
scap03400
]
AYP1020_0573 (polC_1)
Enzymes [BR:
scap01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
AYP1020_0573 (polC_1)
DNA replication proteins [BR:
scap03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
AYP1020_0573 (polC_1)
DNA repair and recombination proteins [BR:
scap03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
AYP1020_0573 (polC_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
RNase_T
PHP
DNA_pol3_finger
DNA_pol3_a_NII
DNA_pol3_a_NI
HHH_6
HHH_3
tRNA_anti-codon
RNase_H_2
T2SSK
YhfH
Ribosomal_S19e
Motif
Other DBs
NCBI-ProteinID:
AKL91720
LinkDB
All DBs
Position
571927..576243
Genome browser
AA seq
1438 aa
AA seq
DB search
MAMTNQEKFKVLADQIKISNQLETDILNEGELTRIDVSNKNRTWEFQISLPRFLSHEDYL
LFTHAIEEEFKEIATVTIHFSIKDTTNQDEHALKYFAHCIDQTRLSPKVKGQLKQKKLIM
SGNVIKVLVSNDIERNHFDKACNGSLVKAFQKCGFNIDKIIFETDTTNHDDDLASLEAHI
QQEDEQSAREATEKLEKMKAEKAKQQDNNESSVDKCQIGKTIQVENIRSIDSIIEEEFKV
AIEGVIFDINLKELKSGRHIVELKVTDYTDSLVLKMFTRKNKDDLDHFKALSVGKWVRAQ
GRIEEDTFVRDLVMMMSDIEEIKKAPKKDKADEKRVEFHLHTAMSQMDGIPNIGSYVEQA
AEWGHSAIAVTDHNVVQAFPDAHNAAEKHGIKMIYGMEGMLVDDGVPIAYKPTDRVLKDA
TYVVFDVETTGLSNQYDKIIELAAVKVHNGEIIDKFERFSNPHERLSETIINLTHITDDM
LTDAPEIEEVLTEFKEWVGDAIFVAHNASFDMGFIDTGYERLGFGPSTNGVIDTLELSRT
INTEYGKHGLNFLAKKYGVELTQHHRAIYDTEATAYIFIKMIQQMTELGVLNHNEINKKL
TNEDAYKRARPSHVTLIVQNQEGLKNLFKIVSASLVKYYYRTPRIPRSLLNEYREGILVG
TACDEGELFTAVMQKDQAQVEKIAKYYDFIEVQPPALYQDLMDRELIRDNETLTEIYQRL
IEAGDSINIPVIATGNAHYLYEHDAIARKILIASQPGNPLNRTTLPEAHFRTTDEMLDEF
HFLGEEKAYEIVVKNTNELAERIERVVPIKDKLFTPRMEGANDEIRELSYSNAKKLYGED
LPQIVIDRLEKELESIIGNGFSVIYLISQRLVKKSLDDGYLVGSRGSVGSSFVATMTEIT
EVNPLPPHYICSHCKTSEFFNDGSVGSGFDLPDKKCPTCGNELIKEGQDIPFETFLGFKG
DKVPDIDLNFSGEYQPNAHNYTKVLFGEDKVFRAGTIGTVAEKTAFGFVKGYLNDQGIHK
RGAEIDRLVKGCTGVKRTTGQHPGGIIVVPDYMDIYDFTPIQFPADDQSAAWMTTHFDFH
SIHDNVLKLDILGHDDPTMIRMLQDLSGIDPKTIPVDDKDTMQIFSGPESLGVTEDEILC
KTGTFGVPEFGTGFVRQMLEDTKPTTFSELVQISGLSHGTDVWLGNAQELIRQGICDLSS
VIGCRDDIMVYLMYAGLEPSMAFKTMEFVRKGRGLTDEMVEAMKENDVPDWYLDSCRKIK
YMFPKAHAAAYVLMAVRIAYFKVHHPLYYYAAYFTIRASDFDLITMIKDKTSIRNTVKDM
YSRYMDLGKKEKDVLTVLEIMNEMAHRGFRMQPISLEKSQAFDFVIEEDTLIPPFVAVPG
LGENVAKRIVEAREEGPFLSKEDLNKKAGLSQKVIDYLDEMGSLPGLPDKAQLSIFDM
NT seq
4317 nt
NT seq
+upstream
nt +downstream
nt
ttggcaatgacaaatcaagaaaaattcaaagtacttgccgatcaaattaaaatatcaaat
caattagagactgatattctaaatgagggtgaactgactcgaattgatgtttctaataag
aatagaacatgggaatttcaaatctcattaccacgttttctttcacatgaagattaccta
ttatttactcatgcaattgaagaagagtttaaagaaatagccacagttaccatccatttc
tcaattaaagatacaactaaccaagacgaacatgcattaaaatactttgcccattgtatt
gatcaaacgagattatcacctaaagttaaaggtcaattaaaacaaaagaaattgattatg
tctggtaatgtaatcaaagttttagtatccaatgatattgaacgtaaccattttgacaaa
gcatgtaatggaagtttagttaaagcttttcaaaaatgtggttttaatatagacaagatt
atctttgaaacagatactacgaatcatgatgatgatttagcctcattagaagctcatatt
caacaagaagatgaacaaagtgctagagaagctactgaaaaattagaaaaaatgaaggct
gaaaaggctaaacaacaagataacaatgaaagttctgttgataagtgtcaaattgggaaa
acaattcaagttgaaaacattcgctctattgattcaattatcgaagaagaattcaaagta
gcaattgaaggtgttattttcgatataaatttaaaagaactaaaaagtggacgtcatatc
gtagagcttaaagtgacagactatacagattctttagttttaaaaatgtttactcgtaaa
aataaagatgacctagaccattttaaagctttaagtgtaggaaaatgggtcagagcacaa
ggacgtattgaagaagatacatttgtgcgtgatttagtcatgatgatgtcagatattgaa
gaaataaaaaaagcaccaaaaaaagacaaagctgatgaaaaacgtgtagaatttcactta
catactgcaatgagtcaaatggacggtatacccaatattggttcttatgttgaacaagct
gctgagtggggtcattcagctattgcagttactgatcataatgtcgttcaagcatttcca
gacgcgcataatgctgcagagaaacacggtatcaaaatgatttatggaatggaaggtatg
cttgttgatgacggtgtgcctattgcttacaaaccaactgatcgagtattaaaagatgct
acttatgtggtatttgacgtggaaacaactggtttatctaatcaatacgataaaattatt
gagttggcagctgtcaaagttcataatggtgaaattattgataaatttgagcgctttagc
aatcctcatgaacgtttatctgaaactatcattaacttaactcatattacagacgatatg
ttaactgatgctccagaaattgaagaagtattaactgaatttaaagaatgggttggagac
gcgatatttgtagctcataatgcctcatttgatatgggatttatagatactggttatgag
cgcttaggctttggaccatctactaacggagtgatcgatacattagaactttcacgtacg
attaatacagaatacggtaaacacggtttgaacttccttgctaaaaagtatggtgtcgaa
cttacacaacaccatagagccatttatgatacagaagcaaccgcttatattttcattaaa
atgattcaacaaatgacggaactgggcgttctcaatcacaatgaaataaataaaaaacta
acaaatgaagacgcatataaaagagcacgtccatctcatgtaacacttatagttcaaaac
caagagggacttaaaaatttatttaaaattgtgagtgcatccttagttaaatactattat
cgtacgcctagaattccacgatctcttttaaatgaatatagagaaggtatattagttggt
actgcttgtgatgaaggtgaattatttactgctgttatgcaaaaagaccaagcacaagtt
gagaaaattgctaagtactacgactttatagaagttcaaccacctgcattgtatcaggac
ttaatggatagagaattaatccgagataacgaaacattaacagagatttatcaacggtta
attgaagcgggagatagtataaatattccagttattgcgacaggaaatgcacattattta
tatgaacatgatgcaattgcacgaaaaattttaatagcttcacaaccgggtaatccttta
aatcgtactacattaccagaagcgcattttagaactacagatgaaatgctagatgagttt
cattttctaggagaagagaaagcttatgaaatcgtagttaaaaatacgaatgaattagca
gaacgtattgaaagagttgtaccgattaaagataaattatttacacctagaatggaaggt
gcaaatgatgagatccgtgagttaagttactcaaatgctaaaaagttatatggggaagat
ttaccacaaatcgttatagatcgattagaaaaggaattagaaagtattataggtaatggt
ttctctgtaatttacttaatttcacaaagattagttaaaaaatcactagatgatggttat
ttagtaggatcacgtggttcagtaggatcaagtttcgtagctactatgactgaaataacc
gaagtcaatcctttaccacctcattatatatgttcacattgtaaaacaagtgagttcttc
aatgatggttcagtaggttcaggtttcgaccttcctgataaaaaatgtcctacatgtggc
aatgaacttataaaagaaggacaagatattccattcgaaacattcttaggtttcaaagga
gataaagttcccgatattgatttaaactttagtggggaatatcaaccaaacgcgcataac
tataccaaagttttattcggagaagataaggttttccgtgcaggaacaattggtacagtt
gctgaaaaaactgctttcggttttgtaaaaggatacctaaatgatcaaggtattcataaa
cgtggagctgagattgatagattggttaaaggttgtactggtgtaaaacgtacgactgga
caacatccgggtggtattatagtagtccctgattatatggatatttatgattttacacct
atacagtttccggcagatgatcaaagtgcagcttggatgacaactcactttgacttccac
tccattcatgataacgtattaaaactcgatatccttggtcacgatgatccaacaatgata
cgtatgcttcaagacttatcaggtattgatcctaaaactattccagttgatgataaggat
acgatgcagattttcagtggacctgaaagtttaggcgttactgaagatgaaatactatgt
aaaactggtacatttggagttcctgaatttggtactgggttcgttagacaaatgttagaa
gatacgaaaccaacaaccttctcagaacttgtacaaatttctggattatcacatggtact
gatgtgtggcttggtaatgctcaagaattgatacggcaaggtatttgtgatttatcaagc
gtaataggttgtcgtgatgatatcatggtctatcttatgtatgcaggattagaaccatct
atggcctttaaaacaatggagtttgtacgtaaaggccgtggattaaccgatgaaatggtt
gaagctatgaaagaaaatgatgtacctgactggtatttagattcatgccgaaaaattaaa
tacatgttccctaaggcccatgctgcagcatatgttctaatggcagtaagaattgcttat
tttaaagtacatcatcctttatattattacgcagcgtacttcacaataagggcttctgac
tttgatctcattacaatgattaaagataaaacgagtatacgtaacactgttaaagatatg
tactcacgttatatggacttaggcaaaaaagaaaaagatgttttaacagttttagaaatt
atgaacgaaatggcacatcgagggttccgtatgcaaccaattagtctcgaaaaaagtcag
gctttcgactttgttattgaagaagatacgcttattcctccgtttgttgcagtaccaggt
ctaggtgagaatgttgccaaacggattgttgaagcacgtgaagaaggacctttcttatcc
aaagaagatttaaataagaaagcaggactttcacaaaaagttattgattatttagatgag
atgggatccttaccaggtttaccagataaagcacaattatctatttttgatatgtag
DBGET
integrated database retrieval system
