Staphylococcus capitis subsp. capitis: AYP1020_0580
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Entry
AYP1020_0580 CDS
T03970
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
scap
Staphylococcus capitis subsp. capitis
Brite
KEGG Orthology (KO) [BR:
scap00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
scap03016
]
AYP1020_0580 (truB)
Enzymes [BR:
scap01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
AYP1020_0580 (truB)
Transfer RNA biogenesis [BR:
scap03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
AYP1020_0580 (truB)
Prokaryotic type
AYP1020_0580 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
Motif
Other DBs
NCBI-ProteinID:
AKL91727
LinkDB
All DBs
Position
581620..582537
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AA seq
305 aa
AA seq
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MYNGILPVFKERGLTSHDVVFKLRKILKMKKIGHTGTLDPEVDGVLPICLGNATRVSDYV
MEMGKTYKAEVTLGVSTTTEDQTGNTLEVKGIDKDDVTERDIDQTLEKFLGVIEQIPPMY
SSVKVKGKKLYEYARNNEEVERPVRHVLIKNIYRTSNLTFQNNQCHFEIEVSCGKGTYIR
TLATDIGKKLGYPAHMSRLTRVSSGGFQIDKSFKLEQIMDMHEHDSLQDKLFPIEYGLKG
LQEIEINDEAFKKRILNGQKFNVKDLDQEIESQFVFIDQMSKKALAIYMVHPEKINEIKP
KKVFN
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
atgtataacggtatattacccgtattcaaagaaagaggtttgacgagccatgatgtcgtt
tttaaacttagaaaaatattaaaaatgaagaagatcggacacacaggtacgttggaccct
gaagtggatggggttcttccaatatgccttggtaatgctactagagtgagcgattatgtg
atggaaatgggaaaaacatataaagctgaagttactctaggagtaagcacaacaactgaa
gatcaaactgggaatacattagaggttaaaggaattgataaagacgatgttacagaacgg
gatattgatcaaacgcttgagaaatttttaggcgttatcgaacaaattccaccaatgtat
tcatcagttaaagttaaaggaaaaaaactttatgagtatgcccgtaataatgaagaagtc
gaaagacctgtaagacatgttcttatcaaaaatatttatagaacttcaaatttaactttt
caaaacaaccaatgtcattttgaaattgaagtgagttgcggtaaaggcacatacatcaga
actttagctactgatattggtaagaaattaggttatccagcgcatatgtcacgtttgaca
agagtttcctcaggtggttttcaaatcgacaaaagttttaaattagaacaaattatggac
atgcatgagcatgattcattacaagataagctatttcctatagaatatggcttaaaagga
ttgcaagagattgaaataaatgatgaagcatttaagaaacgaattttaaatggacaaaaa
tttaatgttaaggacttagatcaagaaatagagtcacagtttgtttttattgatcaaatg
tcaaaaaaagcattagccatttatatggtgcatcctgagaagataaatgaaattaaaccg
aaaaaagtatttaactaa
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